RNA–Protein interactions for RNA: ENST00000479402.1

ACTR3B-204, Transcript of ARP3 actin related protein 3 homolog B, humanhuman

TSL 2

Gene ACTR3B, Length 5,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3B-204ENST00000479402 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
ACTR3B-204ENST00000479402 GOLGA6L22H0YM25 854 aa16.15■□□□□ 0.18
ACTR3B-204ENST00000479402 CEP162Q5TB80 1403 aa16.15■□□□□ 0.18
ACTR3B-204ENST00000479402 NCLP19338 710 aaKnown RBP16.14■□□□□ 0.17
ACTR3B-204ENST00000479402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
ACTR3B-204ENST00000479402 PPM1GO15355 546 aaPredicted RBP16.11■□□□□ 0.17
ACTR3B-204ENST00000479402 TRIM44Q96DX7 344 aaPredicted RBP16.11■□□□□ 0.17
ACTR3B-204ENST00000479402 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
ACTR3B-204ENST00000479402 KDM2AQ9Y2K7 1162 aa16.09■□□□□ 0.17
ACTR3B-204ENST00000479402 RB1CC1Q8TDY2 1594 aa16.09■□□□□ 0.17
ACTR3B-204ENST00000479402 TNIKQ9UKE5 1360 aa16.07■□□□□ 0.16
ACTR3B-204ENST00000479402 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
ACTR3B-204ENST00000479402 IRX6P78412 446 aaPredicted RBP16.06■□□□□ 0.16
ACTR3B-204ENST00000479402 CFAP53Q96M91 514 aa16.06■□□□□ 0.16
ACTR3B-204ENST00000479402 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
ACTR3B-204ENST00000479402 ARXQ96QS3 562 aa16.03■□□□□ 0.16
ACTR3B-204ENST00000479402 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.15
ACTR3B-204ENST00000479402 CDK11BP21127 795 aaKnown RBP16.02■□□□□ 0.15
ACTR3B-204ENST00000479402 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
ACTR3B-204ENST00000479402 ERICH6BQ5W0A0 696 aa15.99■□□□□ 0.15
ACTR3B-204ENST00000479402 WRNQ14191 1432 aaPredicted RBP eCLIP15.99■□□□□ 0.15
ACTR3B-204ENST00000479402 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
ACTR3B-204ENST00000479402 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
ACTR3B-204ENST00000479402 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
ACTR3B-204ENST00000479402 KIF27Q86VH2 1401 aa15.98■□□□□ 0.15
ACTR3B-204ENST00000479402 CHMP7Q8WUX9 453 aaPredicted RBP15.97■□□□□ 0.15
ACTR3B-204ENST00000479402 KNSTRNQ9Y448 316 aa15.97■□□□□ 0.15
ACTR3B-204ENST00000479402 MS4A1P11836 297 aa15.95■□□□□ 0.14
ACTR3B-204ENST00000479402 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
ACTR3B-204ENST00000479402 NACADO15069 1562 aa15.94■□□□□ 0.14
ACTR3B-204ENST00000479402 HIRIP3Q9BW71 556 aaPredicted RBP15.94■□□□□ 0.14
ACTR3B-204ENST00000479402 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
ACTR3B-204ENST00000479402 NOP58Q9Y2X3 529 aaKnown RBP15.92■□□□□ 0.14
ACTR3B-204ENST00000479402 SUPT16HQ9Y5B9 1047 aaKnown RBP15.92■□□□□ 0.14
ACTR3B-204ENST00000479402 PTMAP06454 111 aaKnown RBP15.92■□□□□ 0.14
ACTR3B-204ENST00000479402 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
ACTR3B-204ENST00000479402 ZRSR1Q15695 479 aaKnown RBP15.91■□□□□ 0.14
ACTR3B-204ENST00000479402 CARD11Q9BXL7 1154 aa15.9■□□□□ 0.14
ACTR3B-204ENST00000479402 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
ACTR3B-204ENST00000479402 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
ACTR3B-204ENST00000479402 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
ACTR3B-204ENST00000479402 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
ACTR3B-204ENST00000479402 MAPK8IP3Q9UPT6 1336 aa15.87■□□□□ 0.13
ACTR3B-204ENST00000479402 CCER2I3L3R5 266 aa15.87■□□□□ 0.13
ACTR3B-204ENST00000479402 PNNQ9H307 717 aaKnown RBP15.86■□□□□ 0.13
ACTR3B-204ENST00000479402 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
ACTR3B-204ENST00000479402 GOLGA6L6A8MZA4 724 aa15.84■□□□□ 0.13
ACTR3B-204ENST00000479402 CFAP44Q96MT7 982 aa15.84■□□□□ 0.13
ACTR3B-204ENST00000479402 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
ACTR3B-204ENST00000479402 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
ACTR3B-204ENST00000479402 L1TD1Q5T7N2 865 aaKnown RBP15.81■□□□□ 0.12
ACTR3B-204ENST00000479402 RGL3Q3MIN7 710 aa15.79■□□□□ 0.12
ACTR3B-204ENST00000479402 NAP1L5Q96NT1 182 aaPredicted RBP15.79■□□□□ 0.12
ACTR3B-204ENST00000479402 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
ACTR3B-204ENST00000479402 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
ACTR3B-204ENST00000479402 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
ACTR3B-204ENST00000479402 PTMSP20962 102 aa15.76■□□□□ 0.11
ACTR3B-204ENST00000479402 NRDCO43847 1150 aa15.76■□□□□ 0.11
ACTR3B-204ENST00000479402 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
ACTR3B-204ENST00000479402 TMF1P82094 1093 aa15.75■□□□□ 0.11
ACTR3B-204ENST00000479402 HSCBQ8IWL3 235 aa15.75■□□□□ 0.11
ACTR3B-204ENST00000479402 C14orf37Q86TY3 774 aa15.74■□□□□ 0.11
ACTR3B-204ENST00000479402 RGS3P49796 1198 aa15.73■□□□□ 0.11
ACTR3B-204ENST00000479402 SETD5Q9C0A6 1442 aa15.72■□□□□ 0.11
ACTR3B-204ENST00000479402 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
ACTR3B-204ENST00000479402 ZBTB7CA1YPR0 619 aa15.72■□□□□ 0.11
ACTR3B-204ENST00000479402 KANK1Q14678 1352 aa15.7■□□□□ 0.1
ACTR3B-204ENST00000479402 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
ACTR3B-204ENST00000479402 FRAT1Q92837 279 aaPredicted RBP15.7■□□□□ 0.1
ACTR3B-204ENST00000479402 CHAF1AQ13111 956 aaPredicted RBP15.69■□□□□ 0.1
ACTR3B-204ENST00000479402 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
ACTR3B-204ENST00000479402 MCCP23508 829 aa15.69■□□□□ 0.1
ACTR3B-204ENST00000479402 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
ACTR3B-204ENST00000479402 VPS8Q8N3P4 1428 aa15.67■□□□□ 0.1
ACTR3B-204ENST00000479402 POGKQ9P215 609 aa15.67■□□□□ 0.1
ACTR3B-204ENST00000479402 CC2D1BQ5T0F9 858 aaKnown RBP15.66■□□□□ 0.1
ACTR3B-204ENST00000479402 NEUROD2Q15784 382 aa15.66■□□□□ 0.1
ACTR3B-204ENST00000479402 B4GALNT3Q6L9W6 998 aa15.66■□□□□ 0.1
ACTR3B-204ENST00000479402 MSNP26038 577 aaKnown RBP15.65■□□□□ 0.1
ACTR3B-204ENST00000479402 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
ACTR3B-204ENST00000479402 KTN1Q86UP2 1357 aaKnown RBP15.65■□□□□ 0.1
ACTR3B-204ENST00000479402 OS9Q13438 667 aaPredicted RBP15.63■□□□□ 0.09
ACTR3B-204ENST00000479402 DEKP35659 375 aaKnown RBP15.62■□□□□ 0.09
ACTR3B-204ENST00000479402 A0A0G2JS52 829 aa15.61■□□□□ 0.09
ACTR3B-204ENST00000479402 GOLGA6L4A6NEF3 574 aa15.61■□□□□ 0.09
ACTR3B-204ENST00000479402 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
ACTR3B-204ENST00000479402 RBM19Q9Y4C8 960 aaKnown RBP15.61■□□□□ 0.09
ACTR3B-204ENST00000479402 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
ACTR3B-204ENST00000479402 RALBP1Q15311 655 aa15.61■□□□□ 0.09
ACTR3B-204ENST00000479402 FGD1P98174 961 aa15.6■□□□□ 0.09
ACTR3B-204ENST00000479402 KCNJ4P48050 445 aa15.6■□□□□ 0.09
ACTR3B-204ENST00000479402 PLCB2Q00722 1185 aa15.6■□□□□ 0.09
ACTR3B-204ENST00000479402 U2SURPO15042 1029 aaKnown RBP15.59■□□□□ 0.09
ACTR3B-204ENST00000479402 HSPA5P11021 654 aaKnown RBP15.59■□□□□ 0.09
ACTR3B-204ENST00000479402 GBP4Q96PP9 640 aa15.59■□□□□ 0.09
ACTR3B-204ENST00000479402 IPO8O15397 1037 aaKnown RBP15.59■□□□□ 0.09
ACTR3B-204ENST00000479402 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
ACTR3B-204ENST00000479402 HDGFP51858 240 aaKnown RBP15.58■□□□□ 0.08
ACTR3B-204ENST00000479402 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
ACTR3B-204ENST00000479402 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms