RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 CCDC61Q9Y6R9 512 aa11.22□□□□□ -0.61
CMSS1-203ENST00000478909 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
CMSS1-203ENST00000478909 NUBP1P53384 320 aa11.21□□□□□ -0.61
CMSS1-203ENST00000478909 ZCCHC6Q5VYS8 1495 aaKnown RBP11.18□□□□□ -0.62
CMSS1-203ENST00000478909 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
CMSS1-203ENST00000478909 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
CMSS1-203ENST00000478909 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
CMSS1-203ENST00000478909 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
CMSS1-203ENST00000478909 KIF12Q96FN5 646 aa11.12□□□□□ -0.63
CMSS1-203ENST00000478909 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
CMSS1-203ENST00000478909 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
CMSS1-203ENST00000478909 DCAF1Q9Y4B6 1507 aa11.08□□□□□ -0.64
CMSS1-203ENST00000478909 MAP3K13O43283 966 aa11.07□□□□□ -0.64
CMSS1-203ENST00000478909 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
CMSS1-203ENST00000478909 ASTLQ6HA08 431 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-203ENST00000478909 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
CMSS1-203ENST00000478909 SGIP1Q9BQI5 828 aa10.99□□□□□ -0.65
CMSS1-203ENST00000478909 TRPC6Q9Y210 931 aa10.99□□□□□ -0.65
CMSS1-203ENST00000478909 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
CMSS1-203ENST00000478909 ATMINO43313 823 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-203ENST00000478909 PYGBP11216 843 aa10.97□□□□□ -0.65
CMSS1-203ENST00000478909 GSE1Q14687 1217 aa10.97□□□□□ -0.65
CMSS1-203ENST00000478909 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
CMSS1-203ENST00000478909 IFNL1Q8IU54 200 aa10.95□□□□□ -0.66
CMSS1-203ENST00000478909 LHX8Q68G74 356 aa10.94□□□□□ -0.66
CMSS1-203ENST00000478909 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-203ENST00000478909 TIE1P35590 1138 aa10.92□□□□□ -0.66
CMSS1-203ENST00000478909 ATN1P54259 1190 aaPredicted RBP10.92□□□□□ -0.66
CMSS1-203ENST00000478909 MYO15BQ96JP2 1530 aa10.89□□□□□ -0.67
CMSS1-203ENST00000478909 TTLL13PA6NNM8 815 aa10.88□□□□□ -0.67
CMSS1-203ENST00000478909 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
CMSS1-203ENST00000478909 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-203ENST00000478909 SLC39A7Q92504 469 aa10.86□□□□□ -0.67
CMSS1-203ENST00000478909 METRNQ9UJH8 293 aa10.86□□□□□ -0.67
CMSS1-203ENST00000478909 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
CMSS1-203ENST00000478909 C7P10643 843 aa10.84□□□□□ -0.67
CMSS1-203ENST00000478909 POTEB2H3BUK9 544 aa10.82□□□□□ -0.68
CMSS1-203ENST00000478909 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
CMSS1-203ENST00000478909 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
CMSS1-203ENST00000478909 ZNF467Q7Z7K2 595 aaPredicted RBP10.8□□□□□ -0.68
CMSS1-203ENST00000478909 POTEFA5A3E0 1075 aa10.76□□□□□ -0.69
CMSS1-203ENST00000478909 IER5LQ5T953 404 aa10.74□□□□□ -0.69
CMSS1-203ENST00000478909 TRIM41Q8WV44 630 aa10.73□□□□□ -0.69
CMSS1-203ENST00000478909 COLQQ9Y215 455 aaPredicted RBP10.73□□□□□ -0.69
CMSS1-203ENST00000478909 POTEJP0CG39 1038 aa10.71□□□□□ -0.69
CMSS1-203ENST00000478909 OTUD5Q96G74 571 aa10.71□□□□□ -0.69
CMSS1-203ENST00000478909 SEC24BO95487 1268 aa10.7□□□□□ -0.7
CMSS1-203ENST00000478909 PSEN1P49768 467 aa10.7□□□□□ -0.7
CMSS1-203ENST00000478909 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
CMSS1-203ENST00000478909 NACADO15069 1562 aa10.66□□□□□ -0.7
CMSS1-203ENST00000478909 SHROOM4Q9ULL8 1493 aa10.66□□□□□ -0.7
CMSS1-203ENST00000478909 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-203ENST00000478909 RNF25Q96BH1 459 aaPredicted RBP10.64□□□□□ -0.71
CMSS1-203ENST00000478909 PLCG2P16885 1265 aa10.62□□□□□ -0.71
CMSS1-203ENST00000478909 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
CMSS1-203ENST00000478909 MAMSTRQ6ZN01 415 aa10.61□□□□□ -0.71
CMSS1-203ENST00000478909 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
CMSS1-203ENST00000478909 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
CMSS1-203ENST00000478909 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
CMSS1-203ENST00000478909 PKD2Q13563 968 aa10.58□□□□□ -0.72
CMSS1-203ENST00000478909 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
CMSS1-203ENST00000478909 SCUBE2Q9NQ36 999 aa10.57□□□□□ -0.72
CMSS1-203ENST00000478909 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
CMSS1-203ENST00000478909 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
CMSS1-203ENST00000478909 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
CMSS1-203ENST00000478909 VGFO15240 615 aaPredicted RBP10.54□□□□□ -0.72
CMSS1-203ENST00000478909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-203ENST00000478909 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
CMSS1-203ENST00000478909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.53□□□□□ -0.72
CMSS1-203ENST00000478909 ABCC9O60706 1549 aa10.52□□□□□ -0.73
CMSS1-203ENST00000478909 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
CMSS1-203ENST00000478909 RGL2O15211 777 aa10.49□□□□□ -0.73
CMSS1-203ENST00000478909 EFCAB3Q8N7B9 438 aa10.49□□□□□ -0.73
CMSS1-203ENST00000478909 RB1CC1Q8TDY2 1594 aa10.48□□□□□ -0.73
CMSS1-203ENST00000478909 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
CMSS1-203ENST00000478909 DPY19L2Q6NUT2 758 aa10.45□□□□□ -0.74
CMSS1-203ENST00000478909 SLAIN1Q8ND83 568 aa10.43□□□□□ -0.74
CMSS1-203ENST00000478909 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-203ENST00000478909 BCL11BQ9C0K0 894 aaPredicted RBP10.43□□□□□ -0.74
CMSS1-203ENST00000478909 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
CMSS1-203ENST00000478909 SUPT5HO00267 1087 aaKnown RBP10.4□□□□□ -0.74
CMSS1-203ENST00000478909 STK25O00506 426 aa10.4□□□□□ -0.74
CMSS1-203ENST00000478909 SOX12O15370 315 aa10.4□□□□□ -0.74
CMSS1-203ENST00000478909 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
CMSS1-203ENST00000478909 STK24Q9Y6E0 443 aa10.4□□□□□ -0.74
CMSS1-203ENST00000478909 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
CMSS1-203ENST00000478909 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
CMSS1-203ENST00000478909 MS4A4AQ96JQ5 239 aa10.36□□□□□ -0.75
CMSS1-203ENST00000478909 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
CMSS1-203ENST00000478909 LCE2DQ5TA82 110 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-203ENST00000478909 FAM163AQ96GL9 167 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-203ENST00000478909 G3V3G9 751 aa10.33□□□□□ -0.76
CMSS1-203ENST00000478909 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
CMSS1-203ENST00000478909 NLRP6P59044 892 aa10.31□□□□□ -0.76
CMSS1-203ENST00000478909 FBXO22Q8NEZ5 403 aa10.31□□□□□ -0.76
CMSS1-203ENST00000478909 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
CMSS1-203ENST00000478909 POTEMA6NI47 508 aa10.29□□□□□ -0.76
CMSS1-203ENST00000478909 RSF1Q96T23 1441 aaPredicted RBP10.28□□□□□ -0.76
CMSS1-203ENST00000478909 POTEGQ6S5H5 508 aa10.28□□□□□ -0.76
CMSS1-203ENST00000478909 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms