RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 PABPN1Q86U42 306 aaKnown RBP eCLIP6.45□□□□□ -1.38
SRRM1-211ENST00000478890 POTEFA5A3E0 1075 aa6.39□□□□□ -1.39
SRRM1-211ENST00000478890 MS4A3Q96HJ5 214 aa6.39□□□□□ -1.39
SRRM1-211ENST00000478890 ATN1P54259 1190 aaPredicted RBP6.37□□□□□ -1.39
SRRM1-211ENST00000478890 SLAIN1Q8ND83 568 aa6.37□□□□□ -1.39
SRRM1-211ENST00000478890 MKRN4PQ13434 485 aaPredicted RBP6.32□□□□□ -1.4
SRRM1-211ENST00000478890 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
SRRM1-211ENST00000478890 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
SRRM1-211ENST00000478890 CREBZFQ9NS37 354 aa6.31□□□□□ -1.4
SRRM1-211ENST00000478890 SNPHO15079 494 aa6.3□□□□□ -1.4
SRRM1-211ENST00000478890 SEC24BO95487 1268 aa6.3□□□□□ -1.4
SRRM1-211ENST00000478890 MARVELD3Q96A59 401 aa6.3□□□□□ -1.4
SRRM1-211ENST00000478890 KCNA4P22459 653 aa6.29□□□□□ -1.4
SRRM1-211ENST00000478890 RNF166Q96A37 237 aaPredicted RBP6.26□□□□□ -1.41
SRRM1-211ENST00000478890 COLQQ9Y215 455 aaPredicted RBP6.26□□□□□ -1.41
SRRM1-211ENST00000478890 NPM1P06748 294 aaKnown RBP eCLIP6.24□□□□□ -1.41
SRRM1-211ENST00000478890 FOXD4L1Q9NU39 408 aa6.24□□□□□ -1.41
SRRM1-211ENST00000478890 BMP2KQ9NSY1 1161 aaPredicted RBP6.23□□□□□ -1.41
SRRM1-211ENST00000478890 EMP3P54852 163 aa6.21□□□□□ -1.42
SRRM1-211ENST00000478890 TIE1P35590 1138 aa6.19□□□□□ -1.42
SRRM1-211ENST00000478890 IER5LQ5T953 404 aa6.19□□□□□ -1.42
SRRM1-211ENST00000478890 HS3ST6Q96QI5 342 aa6.19□□□□□ -1.42
SRRM1-211ENST00000478890 ATXN8OSP0DMR3 200 aa6.17□□□□□ -1.42
SRRM1-211ENST00000478890 POTEB3A0JP26 581 aa6.14□□□□□ -1.43
SRRM1-211ENST00000478890 FAM205CA6NFA0 338 aa6.14□□□□□ -1.43
SRRM1-211ENST00000478890 POTEBQ6S5H4 581 aa6.14□□□□□ -1.43
SRRM1-211ENST00000478890 STAG3Q9UJ98 1225 aa6.14□□□□□ -1.43
SRRM1-211ENST00000478890 MYT1LQ9UL68 1186 aa6.13□□□□□ -1.43
SRRM1-211ENST00000478890 TTLL13PA6NNM8 815 aa6.09□□□□□ -1.43
SRRM1-211ENST00000478890 KIF12Q96FN5 646 aa6.08□□□□□ -1.44
SRRM1-211ENST00000478890 TRPC6Q9Y210 931 aa6.08□□□□□ -1.44
SRRM1-211ENST00000478890 MNX1P50219 401 aaPredicted RBP6.06□□□□□ -1.44
SRRM1-211ENST00000478890 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.06□□□□□ -1.44
SRRM1-211ENST00000478890 TRIM35Q9UPQ4 493 aa6.06□□□□□ -1.44
SRRM1-211ENST00000478890 CCDC61Q9Y6R9 512 aa6.06□□□□□ -1.44
SRRM1-211ENST00000478890 PLCG2P16885 1265 aa6.05□□□□□ -1.44
SRRM1-211ENST00000478890 PTGER2P43116 358 aa6.03□□□□□ -1.44
SRRM1-211ENST00000478890 TSPYL2Q9H2G4 693 aaPredicted RBP6.02□□□□□ -1.45
SRRM1-211ENST00000478890 PLA2G2EQ9NZK7 142 aa6□□□□□ -1.45
SRRM1-211ENST00000478890 MAP3K13O43283 966 aa5.98□□□□□ -1.45
SRRM1-211ENST00000478890 IRX5P78411 483 aaPredicted RBP5.94□□□□□ -1.46
SRRM1-211ENST00000478890 IRX2Q9BZI1 471 aaPredicted RBP5.91□□□□□ -1.46
SRRM1-211ENST00000478890 OCEL1Q9H607 264 aa5.9□□□□□ -1.46
SRRM1-211ENST00000478890 C3orf67Q6ZVT6 689 aa5.89□□□□□ -1.47
SRRM1-211ENST00000478890 SGIP1Q9BQI5 828 aa5.89□□□□□ -1.47
SRRM1-211ENST00000478890 ERBB3P21860 1342 aa5.89□□□□□ -1.47
SRRM1-211ENST00000478890 RGS20O76081 388 aa5.86□□□□□ -1.47
SRRM1-211ENST00000478890 HOXB1P14653 301 aaPredicted RBP5.84□□□□□ -1.47
SRRM1-211ENST00000478890 TMEM106CQ9BVX2 250 aa5.83□□□□□ -1.48
SRRM1-211ENST00000478890 HCSTQ9UBK5 93 aa5.82□□□□□ -1.48
SRRM1-211ENST00000478890 PCDHB13Q9Y5F0 798 aa5.81□□□□□ -1.48
SRRM1-211ENST00000478890 VARS2Q5ST30 1063 aaKnown RBP5.8□□□□□ -1.48
SRRM1-211ENST00000478890 ZNF687Q8N1G0 1237 aa5.8□□□□□ -1.48
SRRM1-211ENST00000478890 ZNF710Q8N1W2 664 aa5.79□□□□□ -1.48
SRRM1-211ENST00000478890 SLC4A1APQ9BWU0 796 aaKnown RBP5.79□□□□□ -1.48
SRRM1-211ENST00000478890 L3MBTL3Q96JM7 780 aaPredicted RBP5.77□□□□□ -1.49
SRRM1-211ENST00000478890 HOXB3P14651 431 aaPredicted RBP5.76□□□□□ -1.49
SRRM1-211ENST00000478890 ANKRD13DQ6ZTN6 518 aa5.75□□□□□ -1.49
SRRM1-211ENST00000478890 ZBTB22O15209 634 aa5.73□□□□□ -1.49
SRRM1-211ENST00000478890 DOK7Q18PE1 504 aa5.73□□□□□ -1.49
SRRM1-211ENST00000478890 IFNL1Q8IU54 200 aa5.73□□□□□ -1.49
SRRM1-211ENST00000478890 Q6ZNB5 142 aa5.72□□□□□ -1.49
SRRM1-211ENST00000478890 RIMBP2O15034 1052 aa5.7□□□□□ -1.5
SRRM1-211ENST00000478890 RASEFQ8IZ41 740 aa5.69□□□□□ -1.5
SRRM1-211ENST00000478890 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
SRRM1-211ENST00000478890 PDCD7Q8N8D1 485 aaKnown RBP5.68□□□□□ -1.5
SRRM1-211ENST00000478890 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
SRRM1-211ENST00000478890 LSM11P83369 360 aaKnown RBP eCLIP5.67□□□□□ -1.5
SRRM1-211ENST00000478890 IFFO2Q5TF58 517 aa5.62□□□□□ -1.51
SRRM1-211ENST00000478890 ZSWIM6Q9HCJ5 1215 aa5.62□□□□□ -1.51
SRRM1-211ENST00000478890 PLEKHG5O94827 1062 aa5.59□□□□□ -1.51
SRRM1-211ENST00000478890 SPDYE4A6NLX3 237 aa5.58□□□□□ -1.52
SRRM1-211ENST00000478890 A0A0G2JS52 829 aa5.57□□□□□ -1.52
SRRM1-211ENST00000478890 PBX2P40425 430 aa5.56□□□□□ -1.52
SRRM1-211ENST00000478890 G3V3G9 751 aa5.55□□□□□ -1.52
SRRM1-211ENST00000478890 MKRN3Q13064 507 aaKnown RBP5.55□□□□□ -1.52
SRRM1-211ENST00000478890 DCAF8Q5TAQ9 597 aa5.55□□□□□ -1.52
SRRM1-211ENST00000478890 GOLGA2Q08379 1002 aa5.54□□□□□ -1.52
SRRM1-211ENST00000478890 LAPTM4AQ15012 233 aa5.53□□□□□ -1.52
SRRM1-211ENST00000478890 TRAF7Q6Q0C0 670 aa5.53□□□□□ -1.52
SRRM1-211ENST00000478890 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.53□□□□□ -1.524e-7■■□□□ 13.2
SRRM1-211ENST00000478890 GPR153Q6NV75 609 aa5.52□□□□□ -1.53
SRRM1-211ENST00000478890 BOLA1Q9Y3E2 137 aa5.49□□□□□ -1.53
SRRM1-211ENST00000478890 ZNF316A6NFI3 1004 aaPredicted RBP5.48□□□□□ -1.53
SRRM1-211ENST00000478890 LCE2BO14633 110 aa5.48□□□□□ -1.53
SRRM1-211ENST00000478890 ZNF775Q96BV0 537 aaPredicted RBP5.48□□□□□ -1.53
SRRM1-211ENST00000478890 FAM212AQ96EL1 285 aa5.46□□□□□ -1.54
SRRM1-211ENST00000478890 ZNF787Q6DD87 383 aa5.45□□□□□ -1.54
SRRM1-211ENST00000478890 ADGRD1Q6QNK2 874 aa5.45□□□□□ -1.54
SRRM1-211ENST00000478890 ILDR1Q86SU0 546 aaPredicted RBP5.45□□□□□ -1.54
SRRM1-211ENST00000478890 EHMT2Q96KQ7 1210 aa5.45□□□□□ -1.54
SRRM1-211ENST00000478890 KCTD12Q96CX2 325 aaKnown RBP5.44□□□□□ -1.54
SRRM1-211ENST00000478890 MIER1Q8N108 512 aa5.43□□□□□ -1.54
SRRM1-211ENST00000478890 NUBP1P53384 320 aa5.42□□□□□ -1.54
SRRM1-211ENST00000478890 DPY19L2Q6NUT2 758 aa5.42□□□□□ -1.54
SRRM1-211ENST00000478890 PCDHB8Q9UN66 801 aa5.41□□□□□ -1.54
SRRM1-211ENST00000478890 ARSIQ5FYB1 569 aa5.4□□□□□ -1.54
SRRM1-211ENST00000478890 POTEEQ6S8J3 1075 aa5.4□□□□□ -1.54
SRRM1-211ENST00000478890 ZBTB47Q9UFB7 747 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-211ENST00000478890 AXIN2Q9Y2T1 843 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms