RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
NCK1-206ENST00000478862 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
NCK1-206ENST00000478862 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
NCK1-206ENST00000478862 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
NCK1-206ENST00000478862 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
NCK1-206ENST00000478862 C7P10643 843 aa11.64□□□□□ -0.55
NCK1-206ENST00000478862 SLC39A7Q92504 469 aa11.64□□□□□ -0.55
NCK1-206ENST00000478862 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
NCK1-206ENST00000478862 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
NCK1-206ENST00000478862 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
NCK1-206ENST00000478862 METRNQ9UJH8 293 aa11.6□□□□□ -0.55
NCK1-206ENST00000478862 MAP3K13O43283 966 aa11.58□□□□□ -0.56
NCK1-206ENST00000478862 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
NCK1-206ENST00000478862 TIE1P35590 1138 aa11.54□□□□□ -0.56
NCK1-206ENST00000478862 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
NCK1-206ENST00000478862 NUBP1P53384 320 aa11.53□□□□□ -0.56
NCK1-206ENST00000478862 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
NCK1-206ENST00000478862 OTUD5Q96G74 571 aa11.52□□□□□ -0.57
NCK1-206ENST00000478862 PCDHB13Q9Y5F0 798 aa11.52□□□□□ -0.57
NCK1-206ENST00000478862 BMP2KQ9NSY1 1161 aaPredicted RBP11.51□□□□□ -0.57
NCK1-206ENST00000478862 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
NCK1-206ENST00000478862 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
NCK1-206ENST00000478862 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
NCK1-206ENST00000478862 SEC24BO95487 1268 aa11.46□□□□□ -0.57
NCK1-206ENST00000478862 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
NCK1-206ENST00000478862 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
NCK1-206ENST00000478862 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
NCK1-206ENST00000478862 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
NCK1-206ENST00000478862 IER5LQ5T953 404 aa11.4□□□□□ -0.58
NCK1-206ENST00000478862 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
NCK1-206ENST00000478862 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
NCK1-206ENST00000478862 TRIM35Q9UPQ4 493 aa11.39□□□□□ -0.59
NCK1-206ENST00000478862 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
NCK1-206ENST00000478862 GSE1Q14687 1217 aa11.37□□□□□ -0.59
NCK1-206ENST00000478862 PYGBP11216 843 aa11.35□□□□□ -0.59
NCK1-206ENST00000478862 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
NCK1-206ENST00000478862 PLCG2P16885 1265 aa11.3□□□□□ -0.6
NCK1-206ENST00000478862 POTEFA5A3E0 1075 aa11.29□□□□□ -0.6
NCK1-206ENST00000478862 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
NCK1-206ENST00000478862 POTEMA6NI47 508 aa11.27□□□□□ -0.61
NCK1-206ENST00000478862 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
NCK1-206ENST00000478862 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
NCK1-206ENST00000478862 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
NCK1-206ENST00000478862 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
NCK1-206ENST00000478862 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
NCK1-206ENST00000478862 SPOCK2Q92563 424 aa11.22□□□□□ -0.61
NCK1-206ENST00000478862 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
NCK1-206ENST00000478862 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
NCK1-206ENST00000478862 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
NCK1-206ENST00000478862 IRX5P78411 483 aaPredicted RBP11.18□□□□□ -0.62
NCK1-206ENST00000478862 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
NCK1-206ENST00000478862 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
NCK1-206ENST00000478862 SLAIN1Q8ND83 568 aa11.16□□□□□ -0.62
NCK1-206ENST00000478862 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
NCK1-206ENST00000478862 PSEN1P49768 467 aa11.12□□□□□ -0.63
NCK1-206ENST00000478862 PDAP1Q13442 181 aaKnown RBP11.1□□□□□ -0.63
NCK1-206ENST00000478862 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.09□□□□□ -0.63
NCK1-206ENST00000478862 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
NCK1-206ENST00000478862 SNPHO15079 494 aa11.06□□□□□ -0.64
NCK1-206ENST00000478862 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
NCK1-206ENST00000478862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.647e-7■■■■□ 26.2
NCK1-206ENST00000478862 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
NCK1-206ENST00000478862 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
NCK1-206ENST00000478862 G3V3G9 751 aa11.01□□□□□ -0.65
NCK1-206ENST00000478862 PDCD7Q8N8D1 485 aaKnown RBP10.99□□□□□ -0.65
NCK1-206ENST00000478862 CABP2Q9NPB3 220 aa10.98□□□□□ -0.65
NCK1-206ENST00000478862 ST18O60284 1047 aa10.97□□□□□ -0.65
NCK1-206ENST00000478862 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
NCK1-206ENST00000478862 CDAN1Q8IWY9 1227 aa10.92□□□□□ -0.66
NCK1-206ENST00000478862 ILDR1Q86SU0 546 aaPredicted RBP10.88□□□□□ -0.67
NCK1-206ENST00000478862 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
NCK1-206ENST00000478862 RIOK3O14730 519 aaKnown RBP10.86□□□□□ -0.67
NCK1-206ENST00000478862 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
NCK1-206ENST00000478862 DPY19L2Q6NUT2 758 aa10.84□□□□□ -0.67
NCK1-206ENST00000478862 EFCAB3Q8N7B9 438 aa10.82□□□□□ -0.68
NCK1-206ENST00000478862 VGFO15240 615 aaPredicted RBP10.81□□□□□ -0.68
NCK1-206ENST00000478862 MARVELD3Q96A59 401 aa10.8□□□□□ -0.68
NCK1-206ENST00000478862 EMP3P54852 163 aa10.79□□□□□ -0.68
NCK1-206ENST00000478862 SOX12O15370 315 aa10.78□□□□□ -0.68
NCK1-206ENST00000478862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.75□□□□□ -0.69
NCK1-206ENST00000478862 ZNF710Q8N1W2 664 aa10.75□□□□□ -0.69
NCK1-206ENST00000478862 ZFP91Q96JP5 570 aaPredicted RBP10.75□□□□□ -0.69
NCK1-206ENST00000478862 RIMBP2O15034 1052 aa10.73□□□□□ -0.69
NCK1-206ENST00000478862 DOK7Q18PE1 504 aa10.73□□□□□ -0.69
NCK1-206ENST00000478862 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
NCK1-206ENST00000478862 FAM205CA6NFA0 338 aa10.68□□□□□ -0.7
NCK1-206ENST00000478862 MICALL2Q8IY33 904 aa10.68□□□□□ -0.7
NCK1-206ENST00000478862 NLRP6P59044 892 aa10.67□□□□□ -0.7
NCK1-206ENST00000478862 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
NCK1-206ENST00000478862 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
NCK1-206ENST00000478862 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
NCK1-206ENST00000478862 PHF8Q9UPP1 1060 aa10.65□□□□□ -0.7
NCK1-206ENST00000478862 STK24Q9Y6E0 443 aa10.65□□□□□ -0.7
NCK1-206ENST00000478862 HOXB3P14651 431 aaPredicted RBP10.64□□□□□ -0.71
NCK1-206ENST00000478862 STK25O00506 426 aa10.62□□□□□ -0.71
NCK1-206ENST00000478862 HOXB1P14653 301 aaPredicted RBP10.62□□□□□ -0.71
NCK1-206ENST00000478862 SPNS2Q8IVW8 549 aa10.62□□□□□ -0.71
NCK1-206ENST00000478862 ERBB3P21860 1342 aa10.61□□□□□ -0.71
NCK1-206ENST00000478862 MS4A4AQ96JQ5 239 aa10.6□□□□□ -0.71
NCK1-206ENST00000478862 ZSWIM6Q9HCJ5 1215 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms