RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 EVX2Q03828 476 aa11.01□□□□□ -0.65
CCNL1-220ENST00000478454 CCDC61Q9Y6R9 512 aa11□□□□□ -0.65
CCNL1-220ENST00000478454 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
CCNL1-220ENST00000478454 HAX1O00165 279 aa10.97□□□□□ -0.65
CCNL1-220ENST00000478454 PYGBP11216 843 aa10.97□□□□□ -0.65
CCNL1-220ENST00000478454 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
CCNL1-220ENST00000478454 RGL2O15211 777 aa10.94□□□□□ -0.66
CCNL1-220ENST00000478454 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
CCNL1-220ENST00000478454 RNF25Q96BH1 459 aaPredicted RBP10.93□□□□□ -0.66
CCNL1-220ENST00000478454 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
CCNL1-220ENST00000478454 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
CCNL1-220ENST00000478454 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
CCNL1-220ENST00000478454 ZNF579Q8NAF0 562 aaKnown RBP10.88□□□□□ -0.67
CCNL1-220ENST00000478454 KIF12Q96FN5 646 aa10.88□□□□□ -0.67
CCNL1-220ENST00000478454 MAP3K13O43283 966 aa10.86□□□□□ -0.67
CCNL1-220ENST00000478454 PCDHB8Q9UN66 801 aa10.83□□□□□ -0.68
CCNL1-220ENST00000478454 PCDHB13Q9Y5F0 798 aa10.83□□□□□ -0.68
CCNL1-220ENST00000478454 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
CCNL1-220ENST00000478454 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
CCNL1-220ENST00000478454 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
CCNL1-220ENST00000478454 MS4A3Q96HJ5 214 aa10.77□□□□□ -0.69
CCNL1-220ENST00000478454 SGIP1Q9BQI5 828 aa10.76□□□□□ -0.69
CCNL1-220ENST00000478454 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
CCNL1-220ENST00000478454 GALR2O43603 387 aaPredicted RBP10.75□□□□□ -0.69
CCNL1-220ENST00000478454 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
CCNL1-220ENST00000478454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.72□□□□□ -0.69
CCNL1-220ENST00000478454 GABBR2O75899 941 aa10.72□□□□□ -0.69
CCNL1-220ENST00000478454 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
CCNL1-220ENST00000478454 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
CCNL1-220ENST00000478454 CHGAP10645 457 aaKnown RBP10.68□□□□□ -0.7
CCNL1-220ENST00000478454 PSEN1P49768 467 aa10.68□□□□□ -0.7
CCNL1-220ENST00000478454 PDAP1Q13442 181 aaKnown RBP10.67□□□□□ -0.7
CCNL1-220ENST00000478454 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
CCNL1-220ENST00000478454 STK25O00506 426 aa10.65□□□□□ -0.7
CCNL1-220ENST00000478454 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
CCNL1-220ENST00000478454 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
CCNL1-220ENST00000478454 CLCN6P51797 869 aa10.64□□□□□ -0.71
CCNL1-220ENST00000478454 BMP2KQ9NSY1 1161 aaPredicted RBP10.62□□□□□ -0.71
CCNL1-220ENST00000478454 TAOK2Q9UL54 1235 aa10.62□□□□□ -0.71
CCNL1-220ENST00000478454 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
CCNL1-220ENST00000478454 STK24Q9Y6E0 443 aa10.61□□□□□ -0.71
CCNL1-220ENST00000478454 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
CCNL1-220ENST00000478454 TIE1P35590 1138 aa10.59□□□□□ -0.71
CCNL1-220ENST00000478454 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
CCNL1-220ENST00000478454 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
CCNL1-220ENST00000478454 POTEIP0CG38 1075 aa10.56□□□□□ -0.72
CCNL1-220ENST00000478454 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
CCNL1-220ENST00000478454 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
CCNL1-220ENST00000478454 ATN1P54259 1190 aaPredicted RBP10.55□□□□□ -0.72
CCNL1-220ENST00000478454 CABP2Q9NPB3 220 aa10.55□□□□□ -0.72
CCNL1-220ENST00000478454 ASTLQ6HA08 431 aaPredicted RBP10.54□□□□□ -0.72
CCNL1-220ENST00000478454 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
CCNL1-220ENST00000478454 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
CCNL1-220ENST00000478454 TRIM35Q9UPQ4 493 aa10.51□□□□□ -0.73
CCNL1-220ENST00000478454 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
CCNL1-220ENST00000478454 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
CCNL1-220ENST00000478454 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
CCNL1-220ENST00000478454 PAXIP1Q6ZW49 1069 aaPredicted RBP10.44□□□□□ -0.74
CCNL1-220ENST00000478454 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
CCNL1-220ENST00000478454 PHF8Q9UPP1 1060 aa10.44□□□□□ -0.74
CCNL1-220ENST00000478454 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
CCNL1-220ENST00000478454 GOLGA2Q08379 1002 aa10.43□□□□□ -0.74
CCNL1-220ENST00000478454 FBXO22Q8NEZ5 403 aa10.43□□□□□ -0.74
CCNL1-220ENST00000478454 SOX12O15370 315 aa10.42□□□□□ -0.74
CCNL1-220ENST00000478454 MKRN3Q13064 507 aaKnown RBP10.41□□□□□ -0.74
CCNL1-220ENST00000478454 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
CCNL1-220ENST00000478454 MS4A4AQ96JQ5 239 aa10.41□□□□□ -0.74
CCNL1-220ENST00000478454 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
CCNL1-220ENST00000478454 SPRYD3Q8NCJ5 442 aa10.4□□□□□ -0.74
CCNL1-220ENST00000478454 IRX5P78411 483 aaPredicted RBP10.39□□□□□ -0.75
CCNL1-220ENST00000478454 POTEFA5A3E0 1075 aa10.38□□□□□ -0.75
CCNL1-220ENST00000478454 PPP1R37O75864 691 aa10.37□□□□□ -0.75
CCNL1-220ENST00000478454 PDCD7Q8N8D1 485 aaKnown RBP10.37□□□□□ -0.75
CCNL1-220ENST00000478454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.37□□□□□ -0.751e-10■■□□□ 13.7
CCNL1-220ENST00000478454 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
CCNL1-220ENST00000478454 NLRP6P59044 892 aa10.36□□□□□ -0.75
CCNL1-220ENST00000478454 IER5LQ5T953 404 aa10.36□□□□□ -0.75
CCNL1-220ENST00000478454 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
CCNL1-220ENST00000478454 SLC39A7Q92504 469 aa10.34□□□□□ -0.75
CCNL1-220ENST00000478454 METRNQ9UJH8 293 aa10.33□□□□□ -0.76
CCNL1-220ENST00000478454 C7P10643 843 aa10.32□□□□□ -0.76
CCNL1-220ENST00000478454 OCEL1Q9H607 264 aa10.32□□□□□ -0.76
CCNL1-220ENST00000478454 TSHZ2Q9NRE2 1034 aa10.29□□□□□ -0.76
CCNL1-220ENST00000478454 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
CCNL1-220ENST00000478454 SEC24BO95487 1268 aa10.28□□□□□ -0.76
CCNL1-220ENST00000478454 PLCG2P16885 1265 aa10.27□□□□□ -0.77
CCNL1-220ENST00000478454 HAP1P54257 671 aaPredicted RBP10.26□□□□□ -0.77
CCNL1-220ENST00000478454 POTEB2H3BUK9 544 aa10.24□□□□□ -0.77
CCNL1-220ENST00000478454 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
CCNL1-220ENST00000478454 POTEJP0CG39 1038 aa10.22□□□□□ -0.77
CCNL1-220ENST00000478454 SLC24A1O60721 1099 aa10.21□□□□□ -0.77
CCNL1-220ENST00000478454 MICALL2Q8IY33 904 aa10.2□□□□□ -0.78
CCNL1-220ENST00000478454 TMEM121BQ9BXQ6 578 aaPredicted RBP10.19□□□□□ -0.78
CCNL1-220ENST00000478454 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
CCNL1-220ENST00000478454 KDM2AQ9Y2K7 1162 aa10.17□□□□□ -0.78
CCNL1-220ENST00000478454 L3MBTL3Q96JM7 780 aaPredicted RBP10.15□□□□□ -0.78
CCNL1-220ENST00000478454 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
CCNL1-220ENST00000478454 TMEM92Q6UXU6 159 aa10.12□□□□□ -0.79
CCNL1-220ENST00000478454 CRISPLD2Q9H0B8 497 aa10.09□□□□□ -0.79
CCNL1-220ENST00000478454 VSIG10Q8N0Z9 540 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms