RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 C7P10643 843 aa13.64□□□□□ -0.23
RNF149-204ENST00000478404 METRNQ9UJH8 293 aa13.64□□□□□ -0.23
RNF149-204ENST00000478404 LCE2DQ5TA82 110 aaPredicted RBP13.63□□□□□ -0.23
RNF149-204ENST00000478404 SLC39A7Q92504 469 aa13.63□□□□□ -0.23
RNF149-204ENST00000478404 RTN4Q9NQC3 1192 aaKnown RBP13.63□□□□□ -0.23
RNF149-204ENST00000478404 MAMSTRQ6ZN01 415 aa13.62□□□□□ -0.23
RNF149-204ENST00000478404 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
RNF149-204ENST00000478404 ATMINO43313 823 aaPredicted RBP13.6□□□□□ -0.23
RNF149-204ENST00000478404 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
RNF149-204ENST00000478404 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
RNF149-204ENST00000478404 PROM2Q8N271 834 aa13.58□□□□□ -0.24
RNF149-204ENST00000478404 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
RNF149-204ENST00000478404 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
RNF149-204ENST00000478404 SCUBE2Q9NQ36 999 aa13.47□□□□□ -0.25
RNF149-204ENST00000478404 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
RNF149-204ENST00000478404 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
RNF149-204ENST00000478404 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
RNF149-204ENST00000478404 CCDC61Q9Y6R9 512 aa13.33□□□□□ -0.28
RNF149-204ENST00000478404 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
RNF149-204ENST00000478404 CDAN1Q8IWY9 1227 aa13.29□□□□□ -0.28
RNF149-204ENST00000478404 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
RNF149-204ENST00000478404 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
RNF149-204ENST00000478404 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
RNF149-204ENST00000478404 TIE1P35590 1138 aa13.23□□□□□ -0.29
RNF149-204ENST00000478404 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
RNF149-204ENST00000478404 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
RNF149-204ENST00000478404 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
RNF149-204ENST00000478404 MAP3K13O43283 966 aa13.14□□□□□ -0.31
RNF149-204ENST00000478404 TTLL13PA6NNM8 815 aa13.12□□□□□ -0.31
RNF149-204ENST00000478404 SEC24BO95487 1268 aa13.12□□□□□ -0.31
RNF149-204ENST00000478404 IER5LQ5T953 404 aa13.1□□□□□ -0.31
RNF149-204ENST00000478404 ST18O60284 1047 aa13.09□□□□□ -0.31
RNF149-204ENST00000478404 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
RNF149-204ENST00000478404 SLAIN1Q8ND83 568 aa13.02□□□□□ -0.33
RNF149-204ENST00000478404 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
RNF149-204ENST00000478404 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.33
RNF149-204ENST00000478404 SPNS2Q8IVW8 549 aa13.01□□□□□ -0.33
RNF149-204ENST00000478404 SLC24A1O60721 1099 aa13□□□□□ -0.33
RNF149-204ENST00000478404 RASEFQ8IZ41 740 aa13□□□□□ -0.33
RNF149-204ENST00000478404 TMEM121BQ9BXQ6 578 aaPredicted RBP12.94□□□□□ -0.34
RNF149-204ENST00000478404 PKD2Q13563 968 aa12.91□□□□□ -0.34
RNF149-204ENST00000478404 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
RNF149-204ENST00000478404 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
RNF149-204ENST00000478404 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
RNF149-204ENST00000478404 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
RNF149-204ENST00000478404 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
RNF149-204ENST00000478404 MIER1Q8N108 512 aa12.87□□□□□ -0.35
RNF149-204ENST00000478404 PLCG2P16885 1265 aa12.85□□□□□ -0.35
RNF149-204ENST00000478404 IRX5P78411 483 aaPredicted RBP12.85□□□□□ -0.35
RNF149-204ENST00000478404 SNPHO15079 494 aa12.82□□□□□ -0.36
RNF149-204ENST00000478404 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
RNF149-204ENST00000478404 TMEM106CQ9BVX2 250 aa12.8□□□□□ -0.36
RNF149-204ENST00000478404 NUBP1P53384 320 aa12.75□□□□□ -0.37
RNF149-204ENST00000478404 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
RNF149-204ENST00000478404 MARVELD3Q96A59 401 aa12.74□□□□□ -0.37
RNF149-204ENST00000478404 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
RNF149-204ENST00000478404 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.71□□□□□ -0.37
RNF149-204ENST00000478404 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
RNF149-204ENST00000478404 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
RNF149-204ENST00000478404 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
RNF149-204ENST00000478404 KRTAP3-2Q9BYR7 98 aa12.65□□□□□ -0.38
RNF149-204ENST00000478404 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
RNF149-204ENST00000478404 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
RNF149-204ENST00000478404 EMP3P54852 163 aa12.6□□□□□ -0.39
RNF149-204ENST00000478404 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
RNF149-204ENST00000478404 POTEBQ6S5H4 581 aa12.6□□□□□ -0.39
RNF149-204ENST00000478404 RGL2O15211 777 aa12.59□□□□□ -0.39
RNF149-204ENST00000478404 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
RNF149-204ENST00000478404 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
RNF149-204ENST00000478404 PDCD7Q8N8D1 485 aaKnown RBP12.53□□□□□ -0.4
RNF149-204ENST00000478404 FAM205CA6NFA0 338 aa12.51□□□□□ -0.41
RNF149-204ENST00000478404 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
RNF149-204ENST00000478404 GSE1Q14687 1217 aa12.49□□□□□ -0.41
RNF149-204ENST00000478404 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
RNF149-204ENST00000478404 L3MBTL3Q96JM7 780 aaPredicted RBP12.49□□□□□ -0.41
RNF149-204ENST00000478404 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
RNF149-204ENST00000478404 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
RNF149-204ENST00000478404 PYGBP11216 843 aa12.44□□□□□ -0.42
RNF149-204ENST00000478404 DCAF8Q5TAQ9 597 aa12.41□□□□□ -0.42
RNF149-204ENST00000478404 RNF25Q96BH1 459 aaPredicted RBP12.41□□□□□ -0.42
RNF149-204ENST00000478404 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
RNF149-204ENST00000478404 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.37□□□□□ -0.43
RNF149-204ENST00000478404 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
RNF149-204ENST00000478404 CHGAP10645 457 aaKnown RBP12.35□□□□□ -0.43
RNF149-204ENST00000478404 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
RNF149-204ENST00000478404 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
RNF149-204ENST00000478404 HOXB3P14651 431 aaPredicted RBP12.32□□□□□ -0.44
RNF149-204ENST00000478404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.442e-6■■□□□ 12.1
RNF149-204ENST00000478404 HOXB1P14653 301 aaPredicted RBP12.31□□□□□ -0.44
RNF149-204ENST00000478404 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
RNF149-204ENST00000478404 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
RNF149-204ENST00000478404 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
RNF149-204ENST00000478404 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
RNF149-204ENST00000478404 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
RNF149-204ENST00000478404 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
RNF149-204ENST00000478404 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
RNF149-204ENST00000478404 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
RNF149-204ENST00000478404 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
RNF149-204ENST00000478404 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
RNF149-204ENST00000478404 ERBB3P21860 1342 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms