RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
CACUL1-202ENST00000477583 ASTLQ6HA08 431 aaPredicted RBP8.54□□□□□ -1.04
CACUL1-202ENST00000477583 ZBTB47Q9UFB7 747 aaPredicted RBP8.54□□□□□ -1.04
CACUL1-202ENST00000477583 PELP1Q8IZL8 1130 aaKnown RBP8.53□□□□□ -1.04
CACUL1-202ENST00000477583 KIF12Q96FN5 646 aa8.53□□□□□ -1.04
CACUL1-202ENST00000477583 ATMINO43313 823 aaPredicted RBP8.52□□□□□ -1.05
CACUL1-202ENST00000477583 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
CACUL1-202ENST00000477583 POTEB2H3BUK9 544 aa8.49□□□□□ -1.05
CACUL1-202ENST00000477583 MAP3K13O43283 966 aa8.49□□□□□ -1.05
CACUL1-202ENST00000477583 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
CACUL1-202ENST00000477583 C7P10643 843 aa8.47□□□□□ -1.05
CACUL1-202ENST00000477583 NUBP1P53384 320 aa8.47□□□□□ -1.05
CACUL1-202ENST00000477583 ATN1P54259 1190 aaPredicted RBP8.47□□□□□ -1.05
CACUL1-202ENST00000477583 OTUD5Q96G74 571 aa8.46□□□□□ -1.06
CACUL1-202ENST00000477583 PLSCR2Q9NRY7 297 aa8.46□□□□□ -1.06
CACUL1-202ENST00000477583 BMP2KQ9NSY1 1161 aaPredicted RBP8.45□□□□□ -1.06
CACUL1-202ENST00000477583 FBXO3Q9UK99 471 aa8.45□□□□□ -1.06
CACUL1-202ENST00000477583 TRPC6Q9Y210 931 aa8.45□□□□□ -1.06
CACUL1-202ENST00000477583 TIE1P35590 1138 aa8.44□□□□□ -1.06
CACUL1-202ENST00000477583 FAM212AQ96EL1 285 aa8.44□□□□□ -1.06
CACUL1-202ENST00000477583 PCDHB13Q9Y5F0 798 aa8.42□□□□□ -1.06
CACUL1-202ENST00000477583 SGIP1Q9BQI5 828 aa8.41□□□□□ -1.06
CACUL1-202ENST00000477583 TTLL13PA6NNM8 815 aa8.39□□□□□ -1.07
CACUL1-202ENST00000477583 POTEJP0CG39 1038 aa8.36□□□□□ -1.07
CACUL1-202ENST00000477583 MAMSTRQ6ZN01 415 aa8.36□□□□□ -1.07
CACUL1-202ENST00000477583 IFNL1Q8IU54 200 aa8.36□□□□□ -1.07
CACUL1-202ENST00000477583 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
CACUL1-202ENST00000477583 DCAF8Q5TAQ9 597 aa8.35□□□□□ -1.07
CACUL1-202ENST00000477583 TRIM35Q9UPQ4 493 aa8.35□□□□□ -1.07
CACUL1-202ENST00000477583 POTEFA5A3E0 1075 aa8.34□□□□□ -1.07
CACUL1-202ENST00000477583 SCUBE2Q9NQ36 999 aa8.34□□□□□ -1.07
CACUL1-202ENST00000477583 SEC24BO95487 1268 aa8.33□□□□□ -1.08
CACUL1-202ENST00000477583 PYGBP11216 843 aa8.32□□□□□ -1.08
CACUL1-202ENST00000477583 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
CACUL1-202ENST00000477583 IER5LQ5T953 404 aa8.31□□□□□ -1.08
CACUL1-202ENST00000477583 TMEM106CQ9BVX2 250 aa8.3□□□□□ -1.08
CACUL1-202ENST00000477583 COLQQ9Y215 455 aaPredicted RBP8.3□□□□□ -1.08
CACUL1-202ENST00000477583 GSE1Q14687 1217 aa8.27□□□□□ -1.09
CACUL1-202ENST00000477583 POTEMA6NI47 508 aa8.26□□□□□ -1.09
CACUL1-202ENST00000477583 PLCG2P16885 1265 aa8.24□□□□□ -1.09
CACUL1-202ENST00000477583 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
CACUL1-202ENST00000477583 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
CACUL1-202ENST00000477583 ZNF467Q7Z7K2 595 aaPredicted RBP8.21□□□□□ -1.1
CACUL1-202ENST00000477583 IRX5P78411 483 aaPredicted RBP8.2□□□□□ -1.1
CACUL1-202ENST00000477583 FAM163AQ96GL9 167 aaPredicted RBP8.19□□□□□ -1.1
CACUL1-202ENST00000477583 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
CACUL1-202ENST00000477583 SPOCK2Q92563 424 aa8.18□□□□□ -1.1
CACUL1-202ENST00000477583 CHRM1P11229 460 aaPredicted RBP8.17□□□□□ -1.1
CACUL1-202ENST00000477583 LCE2DQ5TA82 110 aaPredicted RBP8.16□□□□□ -1.1
CACUL1-202ENST00000477583 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
CACUL1-202ENST00000477583 GOLGA2Q08379 1002 aa8.15□□□□□ -1.1
CACUL1-202ENST00000477583 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.1
CACUL1-202ENST00000477583 CIZ1Q9ULV3 898 aaPredicted RBP8.14□□□□□ -1.11
CACUL1-202ENST00000477583 MKRN3Q13064 507 aaKnown RBP8.12□□□□□ -1.11
CACUL1-202ENST00000477583 PSEN1P49768 467 aa8.11□□□□□ -1.11
CACUL1-202ENST00000477583 PCDH10Q9P2E7 1040 aa8.11□□□□□ -1.11
CACUL1-202ENST00000477583 PDAP1Q13442 181 aaKnown RBP8.09□□□□□ -1.11
CACUL1-202ENST00000477583 PDCD7Q8N8D1 485 aaKnown RBP8.08□□□□□ -1.12
CACUL1-202ENST00000477583 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.08□□□□□ -1.12
CACUL1-202ENST00000477583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.06□□□□□ -1.12
CACUL1-202ENST00000477583 ST18O60284 1047 aa8.04□□□□□ -1.12
CACUL1-202ENST00000477583 C3orf67Q6ZVT6 689 aa8.04□□□□□ -1.12
CACUL1-202ENST00000477583 L3MBTL3Q96JM7 780 aaPredicted RBP8.04□□□□□ -1.12
CACUL1-202ENST00000477583 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
CACUL1-202ENST00000477583 CABP2Q9NPB3 220 aa8.03□□□□□ -1.12
CACUL1-202ENST00000477583 SNPHO15079 494 aa8.01□□□□□ -1.13
CACUL1-202ENST00000477583 ILDR1Q86SU0 546 aaPredicted RBP7.99□□□□□ -1.13
CACUL1-202ENST00000477583 CDAN1Q8IWY9 1227 aa7.99□□□□□ -1.13
CACUL1-202ENST00000477583 TMEM121BQ9BXQ6 578 aaPredicted RBP7.97□□□□□ -1.13
CACUL1-202ENST00000477583 G3V3G9 751 aa7.96□□□□□ -1.14
CACUL1-202ENST00000477583 DPY19L2Q6NUT2 758 aa7.95□□□□□ -1.14
CACUL1-202ENST00000477583 BOLA1Q9Y3E2 137 aa7.94□□□□□ -1.14
CACUL1-202ENST00000477583 EFCAB3Q8N7B9 438 aa7.93□□□□□ -1.14
CACUL1-202ENST00000477583 RIOK3O14730 519 aaKnown RBP7.92□□□□□ -1.14
CACUL1-202ENST00000477583 MARVELD3Q96A59 401 aa7.92□□□□□ -1.14
CACUL1-202ENST00000477583 RNF25Q96BH1 459 aaPredicted RBP7.91□□□□□ -1.14
CACUL1-202ENST00000477583 VGFO15240 615 aaPredicted RBP7.89□□□□□ -1.15
CACUL1-202ENST00000477583 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-202ENST00000477583 ZFP91Q96JP5 570 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-202ENST00000477583 EMP3P54852 163 aa7.87□□□□□ -1.15
CACUL1-202ENST00000477583 SOX12O15370 315 aa7.85□□□□□ -1.15
CACUL1-202ENST00000477583 MICALL2Q8IY33 904 aa7.83□□□□□ -1.16
CACUL1-202ENST00000477583 HOXB3P14651 431 aaPredicted RBP7.82□□□□□ -1.16
CACUL1-202ENST00000477583 TAOK2Q9UL54 1235 aa7.82□□□□□ -1.16
CACUL1-202ENST00000477583 PHF8Q9UPP1 1060 aa7.82□□□□□ -1.16
CACUL1-202ENST00000477583 FAM205CA6NFA0 338 aa7.81□□□□□ -1.16
CACUL1-202ENST00000477583 DOK7Q18PE1 504 aa7.81□□□□□ -1.16
CACUL1-202ENST00000477583 ZNF710Q8N1W2 664 aa7.81□□□□□ -1.16
CACUL1-202ENST00000477583 MS4A4AQ96JQ5 239 aa7.81□□□□□ -1.16
CACUL1-202ENST00000477583 HS3ST6Q96QI5 342 aa7.81□□□□□ -1.16
CACUL1-202ENST00000477583 BCL11BQ9C0K0 894 aaPredicted RBP7.79□□□□□ -1.16
CACUL1-202ENST00000477583 ECM2O94769 699 aaPredicted RBP7.78□□□□□ -1.16
CACUL1-202ENST00000477583 STK24Q9Y6E0 443 aa7.78□□□□□ -1.16
CACUL1-202ENST00000477583 POTEB3A0JP26 581 aa7.77□□□□□ -1.17
CACUL1-202ENST00000477583 RIMBP2O15034 1052 aa7.77□□□□□ -1.17
CACUL1-202ENST00000477583 HOXB1P14653 301 aaPredicted RBP7.77□□□□□ -1.17
CACUL1-202ENST00000477583 NLRP6P59044 892 aa7.77□□□□□ -1.17
CACUL1-202ENST00000477583 POTEBQ6S5H4 581 aa7.77□□□□□ -1.17
CACUL1-202ENST00000477583 TMEM92Q6UXU6 159 aa7.77□□□□□ -1.17
CACUL1-202ENST00000477583 SPNS2Q8IVW8 549 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms