RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 PROM2Q8N271 834 aa11.81□□□□□ -0.52
NSMCE4A-208ENST00000477289 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
NSMCE4A-208ENST00000477289 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
NSMCE4A-208ENST00000477289 POTEMA6NI47 508 aa11.79□□□□□ -0.52
NSMCE4A-208ENST00000477289 C7P10643 843 aa11.79□□□□□ -0.52
NSMCE4A-208ENST00000477289 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
NSMCE4A-208ENST00000477289 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
NSMCE4A-208ENST00000477289 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
NSMCE4A-208ENST00000477289 ATN1P54259 1190 aaPredicted RBP11.72□□□□□ -0.53
NSMCE4A-208ENST00000477289 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
NSMCE4A-208ENST00000477289 MAMSTRQ6ZN01 415 aa11.7□□□□□ -0.54
NSMCE4A-208ENST00000477289 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
NSMCE4A-208ENST00000477289 TRPC6Q9Y210 931 aa11.65□□□□□ -0.54
NSMCE4A-208ENST00000477289 MIER1Q8N108 512 aa11.64□□□□□ -0.55
NSMCE4A-208ENST00000477289 MAP3K13O43283 966 aa11.63□□□□□ -0.55
NSMCE4A-208ENST00000477289 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
NSMCE4A-208ENST00000477289 SCUBE2Q9NQ36 999 aa11.63□□□□□ -0.55
NSMCE4A-208ENST00000477289 POTEFA5A3E0 1075 aa11.62□□□□□ -0.55
NSMCE4A-208ENST00000477289 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
NSMCE4A-208ENST00000477289 TIE1P35590 1138 aa11.6□□□□□ -0.55
NSMCE4A-208ENST00000477289 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
NSMCE4A-208ENST00000477289 PCDH10Q9P2E7 1040 aa11.59□□□□□ -0.55
NSMCE4A-208ENST00000477289 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
NSMCE4A-208ENST00000477289 TTLL13PA6NNM8 815 aa11.53□□□□□ -0.56
NSMCE4A-208ENST00000477289 FKBP8Q14318 412 aa11.52□□□□□ -0.57
NSMCE4A-208ENST00000477289 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
NSMCE4A-208ENST00000477289 COLQQ9Y215 455 aaPredicted RBP11.51□□□□□ -0.57
NSMCE4A-208ENST00000477289 SEC24BO95487 1268 aa11.5□□□□□ -0.57
NSMCE4A-208ENST00000477289 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
NSMCE4A-208ENST00000477289 PCDHB13Q9Y5F0 798 aa11.47□□□□□ -0.57
NSMCE4A-208ENST00000477289 TRIM35Q9UPQ4 493 aa11.46□□□□□ -0.57
NSMCE4A-208ENST00000477289 NUBP1P53384 320 aa11.44□□□□□ -0.58
NSMCE4A-208ENST00000477289 IER5LQ5T953 404 aa11.43□□□□□ -0.58
NSMCE4A-208ENST00000477289 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
NSMCE4A-208ENST00000477289 IFNL1Q8IU54 200 aa11.4□□□□□ -0.58
NSMCE4A-208ENST00000477289 FAM212AQ96EL1 285 aa11.36□□□□□ -0.59
NSMCE4A-208ENST00000477289 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
NSMCE4A-208ENST00000477289 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
NSMCE4A-208ENST00000477289 SLAIN1Q8ND83 568 aa11.32□□□□□ -0.6
NSMCE4A-208ENST00000477289 PLCG2P16885 1265 aa11.3□□□□□ -0.6
NSMCE4A-208ENST00000477289 ST18O60284 1047 aa11.28□□□□□ -0.6
NSMCE4A-208ENST00000477289 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
NSMCE4A-208ENST00000477289 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
NSMCE4A-208ENST00000477289 PYGBP11216 843 aa11.23□□□□□ -0.61
NSMCE4A-208ENST00000477289 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
NSMCE4A-208ENST00000477289 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
NSMCE4A-208ENST00000477289 PCDHB8Q9UN66 801 aa11.18□□□□□ -0.62
NSMCE4A-208ENST00000477289 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
NSMCE4A-208ENST00000477289 TMEM121BQ9BXQ6 578 aaPredicted RBP11.12□□□□□ -0.63
NSMCE4A-208ENST00000477289 SNPHO15079 494 aa11.11□□□□□ -0.63
NSMCE4A-208ENST00000477289 VASPP50552 380 aaPredicted RBP11.1□□□□□ -0.63
NSMCE4A-208ENST00000477289 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
NSMCE4A-208ENST00000477289 MARVELD3Q96A59 401 aa11.06□□□□□ -0.64
NSMCE4A-208ENST00000477289 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
NSMCE4A-208ENST00000477289 MMRN1Q13201 1228 aa11.04□□□□□ -0.64
NSMCE4A-208ENST00000477289 GSE1Q14687 1217 aa11.04□□□□□ -0.64
NSMCE4A-208ENST00000477289 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
NSMCE4A-208ENST00000477289 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
NSMCE4A-208ENST00000477289 GOLGA2Q08379 1002 aa11.02□□□□□ -0.65
NSMCE4A-208ENST00000477289 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
NSMCE4A-208ENST00000477289 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
NSMCE4A-208ENST00000477289 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
NSMCE4A-208ENST00000477289 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
NSMCE4A-208ENST00000477289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.656e-10■■■□□ 17.6
NSMCE4A-208ENST00000477289 PSEN1P49768 467 aa10.96□□□□□ -0.65
NSMCE4A-208ENST00000477289 EMP3P54852 163 aa10.95□□□□□ -0.66
NSMCE4A-208ENST00000477289 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
NSMCE4A-208ENST00000477289 ILDR1Q86SU0 546 aaPredicted RBP10.9□□□□□ -0.66
NSMCE4A-208ENST00000477289 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
NSMCE4A-208ENST00000477289 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
NSMCE4A-208ENST00000477289 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
NSMCE4A-208ENST00000477289 FAM205CA6NFA0 338 aa10.88□□□□□ -0.67
NSMCE4A-208ENST00000477289 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
NSMCE4A-208ENST00000477289 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
NSMCE4A-208ENST00000477289 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
NSMCE4A-208ENST00000477289 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
NSMCE4A-208ENST00000477289 SPOCK2Q92563 424 aa10.85□□□□□ -0.67
NSMCE4A-208ENST00000477289 CABP2Q9NPB3 220 aa10.84□□□□□ -0.67
NSMCE4A-208ENST00000477289 BOLA1Q9Y3E2 137 aa10.81□□□□□ -0.68
NSMCE4A-208ENST00000477289 G3V3G9 751 aa10.8□□□□□ -0.68
NSMCE4A-208ENST00000477289 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
NSMCE4A-208ENST00000477289 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
NSMCE4A-208ENST00000477289 HOXB1P14653 301 aaPredicted RBP10.73□□□□□ -0.69
NSMCE4A-208ENST00000477289 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
NSMCE4A-208ENST00000477289 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
NSMCE4A-208ENST00000477289 ERBB3P21860 1342 aa10.69□□□□□ -0.7
NSMCE4A-208ENST00000477289 EFCAB3Q8N7B9 438 aa10.68□□□□□ -0.7
NSMCE4A-208ENST00000477289 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
NSMCE4A-208ENST00000477289 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
NSMCE4A-208ENST00000477289 TMEM92Q6UXU6 159 aa10.61□□□□□ -0.71
NSMCE4A-208ENST00000477289 TRIM41Q8WV44 630 aa10.61□□□□□ -0.71
NSMCE4A-208ENST00000477289 MICALL2Q8IY33 904 aa10.6□□□□□ -0.71
NSMCE4A-208ENST00000477289 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
NSMCE4A-208ENST00000477289 ZSWIM6Q9HCJ5 1215 aa10.57□□□□□ -0.72
NSMCE4A-208ENST00000477289 SOX12O15370 315 aa10.54□□□□□ -0.72
NSMCE4A-208ENST00000477289 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
NSMCE4A-208ENST00000477289 ZNF687Q8N1G0 1237 aa10.54□□□□□ -0.72
NSMCE4A-208ENST00000477289 RNF25Q96BH1 459 aaPredicted RBP10.54□□□□□ -0.72
NSMCE4A-208ENST00000477289 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
NSMCE4A-208ENST00000477289 MYT1LQ9UL68 1186 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms