RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 CREBZFQ9NS37 354 aa6.49□□□□□ -1.37
RPL39P34-201ENST00000477141 SCUBE2Q9NQ36 999 aa6.48□□□□□ -1.37
RPL39P34-201ENST00000477141 ATMINO43313 823 aaPredicted RBP6.44□□□□□ -1.38
RPL39P34-201ENST00000477141 CDAN1Q8IWY9 1227 aa6.42□□□□□ -1.38
RPL39P34-201ENST00000477141 STAG3Q9UJ98 1225 aa6.42□□□□□ -1.38
RPL39P34-201ENST00000477141 MS4A3Q96HJ5 214 aa6.41□□□□□ -1.38
RPL39P34-201ENST00000477141 NPM1P06748 294 aaKnown RBP eCLIP6.38□□□□□ -1.39
RPL39P34-201ENST00000477141 ATN1P54259 1190 aaPredicted RBP6.34□□□□□ -1.39
RPL39P34-201ENST00000477141 POTEFA5A3E0 1075 aa6.33□□□□□ -1.4
RPL39P34-201ENST00000477141 MNX1P50219 401 aaPredicted RBP6.33□□□□□ -1.4
RPL39P34-201ENST00000477141 MMRN1Q13201 1228 aa6.32□□□□□ -1.4
RPL39P34-201ENST00000477141 SPNS2Q8IVW8 549 aa6.28□□□□□ -1.4
RPL39P34-201ENST00000477141 BMP2KQ9NSY1 1161 aaPredicted RBP6.27□□□□□ -1.41
RPL39P34-201ENST00000477141 ST18O60284 1047 aa6.26□□□□□ -1.41
RPL39P34-201ENST00000477141 TIE1P35590 1138 aa6.24□□□□□ -1.41
RPL39P34-201ENST00000477141 CCDC61Q9Y6R9 512 aa6.24□□□□□ -1.41
RPL39P34-201ENST00000477141 SEC24BO95487 1268 aa6.23□□□□□ -1.41
RPL39P34-201ENST00000477141 COLQQ9Y215 455 aaPredicted RBP6.23□□□□□ -1.41
RPL39P34-201ENST00000477141 KIF12Q96FN5 646 aa6.22□□□□□ -1.41
RPL39P34-201ENST00000477141 TSPYL2Q9H2G4 693 aaPredicted RBP6.22□□□□□ -1.41
RPL39P34-201ENST00000477141 TRPC6Q9Y210 931 aa6.22□□□□□ -1.41
RPL39P34-201ENST00000477141 SLAIN1Q8ND83 568 aa6.21□□□□□ -1.42
RPL39P34-201ENST00000477141 TMEM121BQ9BXQ6 578 aaPredicted RBP6.2□□□□□ -1.42
RPL39P34-201ENST00000477141 IER5LQ5T953 404 aa6.19□□□□□ -1.42
RPL39P34-201ENST00000477141 TTLL13PA6NNM8 815 aa6.18□□□□□ -1.42
RPL39P34-201ENST00000477141 SPDYE4A6NLX3 237 aa6.16□□□□□ -1.42
RPL39P34-201ENST00000477141 MAP3K13O43283 966 aa6.15□□□□□ -1.42
RPL39P34-201ENST00000477141 TRIM35Q9UPQ4 493 aa6.14□□□□□ -1.43
RPL39P34-201ENST00000477141 SNPHO15079 494 aa6.11□□□□□ -1.43
RPL39P34-201ENST00000477141 MARVELD3Q96A59 401 aa6.1□□□□□ -1.43
RPL39P34-201ENST00000477141 PLCG2P16885 1265 aa6.08□□□□□ -1.44
RPL39P34-201ENST00000477141 SGIP1Q9BQI5 828 aa6.07□□□□□ -1.44
RPL39P34-201ENST00000477141 KRTAP3-3Q9BYR6 98 aa6.06□□□□□ -1.44
RPL39P34-201ENST00000477141 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
RPL39P34-201ENST00000477141 EMP3P54852 163 aa6.04□□□□□ -1.44
RPL39P34-201ENST00000477141 IRX5P78411 483 aaPredicted RBP6.04□□□□□ -1.44
RPL39P34-201ENST00000477141 RASEFQ8IZ41 740 aa6.04□□□□□ -1.44
RPL39P34-201ENST00000477141 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.03□□□□□ -1.44
RPL39P34-201ENST00000477141 PCDHB13Q9Y5F0 798 aa6.03□□□□□ -1.44
RPL39P34-201ENST00000477141 HS3ST6Q96QI5 342 aa6.01□□□□□ -1.45
RPL39P34-201ENST00000477141 TMEM106CQ9BVX2 250 aa6□□□□□ -1.45
RPL39P34-201ENST00000477141 PLEKHG5O94827 1062 aa5.99□□□□□ -1.45
RPL39P34-201ENST00000477141 OCEL1Q9H607 264 aa5.99□□□□□ -1.45
RPL39P34-201ENST00000477141 POTEB3A0JP26 581 aa5.98□□□□□ -1.45
RPL39P34-201ENST00000477141 POTEBQ6S5H4 581 aa5.98□□□□□ -1.45
RPL39P34-201ENST00000477141 IFNL1Q8IU54 200 aa5.98□□□□□ -1.45
RPL39P34-201ENST00000477141 FAM205CA6NFA0 338 aa5.97□□□□□ -1.45
RPL39P34-201ENST00000477141 PROM2Q8N271 834 aa5.96□□□□□ -1.46
RPL39P34-201ENST00000477141 RNF166Q96A37 237 aaPredicted RBP5.94□□□□□ -1.46
RPL39P34-201ENST00000477141 C3orf67Q6ZVT6 689 aa5.92□□□□□ -1.46
RPL39P34-201ENST00000477141 MIER1Q8N108 512 aa5.91□□□□□ -1.46
RPL39P34-201ENST00000477141 NUBP1P53384 320 aa5.87□□□□□ -1.47
RPL39P34-201ENST00000477141 PDCD7Q8N8D1 485 aaKnown RBP5.87□□□□□ -1.47
RPL39P34-201ENST00000477141 FAM212AQ96EL1 285 aa5.86□□□□□ -1.47
RPL39P34-201ENST00000477141 L3MBTL3Q96JM7 780 aaPredicted RBP5.86□□□□□ -1.47
RPL39P34-201ENST00000477141 MYT1LQ9UL68 1186 aa5.86□□□□□ -1.47
RPL39P34-201ENST00000477141 ZBTB47Q9UFB7 747 aaPredicted RBP5.85□□□□□ -1.47
RPL39P34-201ENST00000477141 CSRNP3Q8WYN3 585 aa5.84□□□□□ -1.47
RPL39P34-201ENST00000477141 HOXB1P14653 301 aaPredicted RBP5.82□□□□□ -1.48
RPL39P34-201ENST00000477141 PLCD3Q8N3E9 789 aa5.82□□□□□ -1.48
RPL39P34-201ENST00000477141 ERBB3P21860 1342 aa5.81□□□□□ -1.48
RPL39P34-201ENST00000477141 PTGER2P43116 358 aa5.81□□□□□ -1.48
RPL39P34-201ENST00000477141 HOXB3P14651 431 aaPredicted RBP5.8□□□□□ -1.48
RPL39P34-201ENST00000477141 MKRN3Q13064 507 aaKnown RBP5.78□□□□□ -1.48
RPL39P34-201ENST00000477141 ZNF710Q8N1W2 664 aa5.78□□□□□ -1.48
RPL39P34-201ENST00000477141 GOLGA2Q08379 1002 aa5.77□□□□□ -1.49
RPL39P34-201ENST00000477141 PCDHB8Q9UN66 801 aa5.77□□□□□ -1.49
RPL39P34-201ENST00000477141 PYGBP11216 843 aa5.76□□□□□ -1.49
RPL39P34-201ENST00000477141 DOK7Q18PE1 504 aa5.76□□□□□ -1.49
RPL39P34-201ENST00000477141 VARS2Q5ST30 1063 aaKnown RBP5.75□□□□□ -1.49
RPL39P34-201ENST00000477141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.75□□□□□ -1.49
RPL39P34-201ENST00000477141 ZNF687Q8N1G0 1237 aa5.74□□□□□ -1.49
RPL39P34-201ENST00000477141 RIMBP2O15034 1052 aa5.72□□□□□ -1.49
RPL39P34-201ENST00000477141 ILDR1Q86SU0 546 aaPredicted RBP5.72□□□□□ -1.49
RPL39P34-201ENST00000477141 G3V3G9 751 aa5.7□□□□□ -1.5
RPL39P34-201ENST00000477141 DCAF8Q5TAQ9 597 aa5.7□□□□□ -1.5
RPL39P34-201ENST00000477141 ZNF467Q7Z7K2 595 aaPredicted RBP5.7□□□□□ -1.5
RPL39P34-201ENST00000477141 PLA2G2EQ9NZK7 142 aa5.7□□□□□ -1.5
RPL39P34-201ENST00000477141 BOLA1Q9Y3E2 137 aa5.69□□□□□ -1.5
RPL39P34-201ENST00000477141 ZSWIM6Q9HCJ5 1215 aa5.68□□□□□ -1.5
RPL39P34-201ENST00000477141 DPY19L2Q6NUT2 758 aa5.67□□□□□ -1.5
RPL39P34-201ENST00000477141 ANKRD13DQ6ZTN6 518 aa5.65□□□□□ -1.5
RPL39P34-201ENST00000477141 PSEN1P49768 467 aa5.64□□□□□ -1.51
RPL39P34-201ENST00000477141 LSM11P83369 360 aaKnown RBP eCLIP5.63□□□□□ -1.51
RPL39P34-201ENST00000477141 GPR153Q6NV75 609 aa5.62□□□□□ -1.51
RPL39P34-201ENST00000477141 HCSTQ9UBK5 93 aa5.62□□□□□ -1.51
RPL39P34-201ENST00000477141 GSE1Q14687 1217 aa5.59□□□□□ -1.51
RPL39P34-201ENST00000477141 CHRM1P11229 460 aaPredicted RBP5.58□□□□□ -1.52
RPL39P34-201ENST00000477141 PDAP1Q13442 181 aaKnown RBP5.58□□□□□ -1.52
RPL39P34-201ENST00000477141 CABP2Q9NPB3 220 aa5.58□□□□□ -1.52
RPL39P34-201ENST00000477141 ZNF316A6NFI3 1004 aaPredicted RBP5.56□□□□□ -1.52
RPL39P34-201ENST00000477141 PBX2P40425 430 aa5.56□□□□□ -1.52
RPL39P34-201ENST00000477141 TMEM92Q6UXU6 159 aa5.55□□□□□ -1.52
RPL39P34-201ENST00000477141 RGS20O76081 388 aa5.53□□□□□ -1.52
RPL39P34-201ENST00000477141 ARSIQ5FYB1 569 aa5.53□□□□□ -1.52
RPL39P34-201ENST00000477141 IRX2Q9BZI1 471 aaPredicted RBP5.53□□□□□ -1.52
RPL39P34-201ENST00000477141 MICALL2Q8IY33 904 aa5.52□□□□□ -1.53
RPL39P34-201ENST00000477141 EHMT2Q96KQ7 1210 aa5.5□□□□□ -1.53
RPL39P34-201ENST00000477141 POTEEQ6S8J3 1075 aa5.49□□□□□ -1.53
RPL39P34-201ENST00000477141 KHSRPQ92945 711 aaKnown RBP eCLIP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms