RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 NCLP19338 710 aaKnown RBP23.37■■□□□ 1.33
LPCAT1-202ENST00000475622 CDK11BP21127 795 aaKnown RBP23.37■■□□□ 1.33
LPCAT1-202ENST00000475622 RRP7BPQ9NSQ0 103 aa23.36■■□□□ 1.33
LPCAT1-202ENST00000475622 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
LPCAT1-202ENST00000475622 GOLGA6L22H0YM25 854 aa23.33■■□□□ 1.33
LPCAT1-202ENST00000475622 ANP32EQ9BTT0 268 aa23.33■■□□□ 1.33
LPCAT1-202ENST00000475622 SENP3-EIF4A1A0A087X0R7 540 aa23.33■■□□□ 1.33
LPCAT1-202ENST00000475622 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
LPCAT1-202ENST00000475622 A0A0G2JS52 829 aa23.31■■□□□ 1.32
LPCAT1-202ENST00000475622 ZBTB7CA1YPR0 619 aa23.29■■□□□ 1.32
LPCAT1-202ENST00000475622 CLIP1P30622 1438 aa23.28■■□□□ 1.32
LPCAT1-202ENST00000475622 PLEKHG5O94827 1062 aa23.27■■□□□ 1.32
LPCAT1-202ENST00000475622 SUPT16HQ9Y5B9 1047 aaKnown RBP23.25■■□□□ 1.31
LPCAT1-202ENST00000475622 C14orf37Q86TY3 774 aa23.23■■□□□ 1.31
LPCAT1-202ENST00000475622 RGL3Q3MIN7 710 aa23.23■■□□□ 1.31
LPCAT1-202ENST00000475622 PTMAP06454 111 aaKnown RBP23.21■■□□□ 1.31
LPCAT1-202ENST00000475622 CFAP53Q96M91 514 aa23.19■■□□□ 1.3
LPCAT1-202ENST00000475622 PPP1R15AO75807 674 aaPredicted RBP23.19■■□□□ 1.3
LPCAT1-202ENST00000475622 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
LPCAT1-202ENST00000475622 PPM1GO15355 546 aaPredicted RBP23.17■■□□□ 1.3
LPCAT1-202ENST00000475622 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
LPCAT1-202ENST00000475622 ZRSR1Q15695 479 aaKnown RBP23.15■■□□□ 1.3
LPCAT1-202ENST00000475622 TPRNQ4KMQ1 711 aa23.15■■□□□ 1.3
LPCAT1-202ENST00000475622 FTSJ3Q8IY81 847 aaKnown RBP23.14■■□□□ 1.3
LPCAT1-202ENST00000475622 DNTTIP2Q5QJE6 756 aaKnown RBP23.12■■□□□ 1.29
LPCAT1-202ENST00000475622 CASC1Q6TDU7 716 aa23.12■■□□□ 1.29
LPCAT1-202ENST00000475622 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
LPCAT1-202ENST00000475622 LAS1LQ9Y4W2 734 aaKnown RBP23.11■■□□□ 1.29
LPCAT1-202ENST00000475622 NEUROD2Q15784 382 aa23.11■■□□□ 1.29
LPCAT1-202ENST00000475622 TNNT2P45379 298 aaPredicted RBP23.1■■□□□ 1.29
LPCAT1-202ENST00000475622 ERICH6BQ5W0A0 696 aa23.1■■□□□ 1.29
LPCAT1-202ENST00000475622 CDCA8Q53HL2 280 aa23.1■■□□□ 1.29
LPCAT1-202ENST00000475622 RGS3P49796 1198 aa23.08■■□□□ 1.29
LPCAT1-202ENST00000475622 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
LPCAT1-202ENST00000475622 PPP4R2Q9NY27 417 aa23.07■■□□□ 1.28
LPCAT1-202ENST00000475622 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
LPCAT1-202ENST00000475622 PLEKHD1A6NEE1 506 aa23.06■■□□□ 1.28
LPCAT1-202ENST00000475622 RTN4Q9NQC3 1192 aaKnown RBP23.03■■□□□ 1.28
LPCAT1-202ENST00000475622 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
LPCAT1-202ENST00000475622 NAP1L5Q96NT1 182 aaPredicted RBP23.02■■□□□ 1.28
LPCAT1-202ENST00000475622 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
LPCAT1-202ENST00000475622 FRAT1Q92837 279 aaPredicted RBP23.01■■□□□ 1.27
LPCAT1-202ENST00000475622 MAPK8IP3Q9UPT6 1336 aa23.01■■□□□ 1.27
LPCAT1-202ENST00000475622 NOP58Q9Y2X3 529 aaKnown RBP23■■□□□ 1.27
LPCAT1-202ENST00000475622 PLCB2Q00722 1185 aa22.98■■□□□ 1.27
LPCAT1-202ENST00000475622 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
LPCAT1-202ENST00000475622 GOLGA3Q08378 1498 aa22.97■■□□□ 1.27
LPCAT1-202ENST00000475622 NUDCQ9Y266 331 aa22.95■■□□□ 1.27
LPCAT1-202ENST00000475622 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
LPCAT1-202ENST00000475622 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
LPCAT1-202ENST00000475622 B4GALNT3Q6L9W6 998 aa22.93■■□□□ 1.26
LPCAT1-202ENST00000475622 HSP90AB1P08238 724 aaKnown RBP22.92■■□□□ 1.26
LPCAT1-202ENST00000475622 TAOK2Q9UL54 1235 aa22.9■■□□□ 1.26
LPCAT1-202ENST00000475622 TULP1O00294 542 aaPredicted RBP22.89■■□□□ 1.26
LPCAT1-202ENST00000475622 CC2D1BQ5T0F9 858 aaKnown RBP22.89■■□□□ 1.26
LPCAT1-202ENST00000475622 EEA1Q15075 1411 aa22.89■■□□□ 1.25
LPCAT1-202ENST00000475622 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
LPCAT1-202ENST00000475622 CHMP4BQ9H444 224 aaKnown RBP22.85■■□□□ 1.25
LPCAT1-202ENST00000475622 POGKQ9P215 609 aa22.85■■□□□ 1.25
LPCAT1-202ENST00000475622 FGD1P98174 961 aa22.84■■□□□ 1.25
LPCAT1-202ENST00000475622 U2SURPO15042 1029 aaKnown RBP22.84■■□□□ 1.25
LPCAT1-202ENST00000475622 MS4A1P11836 297 aa22.84■■□□□ 1.25
LPCAT1-202ENST00000475622 OS9Q13438 667 aaPredicted RBP22.83■■□□□ 1.25
LPCAT1-202ENST00000475622 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
LPCAT1-202ENST00000475622 KCNJ4P48050 445 aa22.81■■□□□ 1.24
LPCAT1-202ENST00000475622 GOLGA6L6A8MZA4 724 aa22.8■■□□□ 1.24
LPCAT1-202ENST00000475622 LMOD2Q6P5Q4 547 aa22.8■■□□□ 1.24
LPCAT1-202ENST00000475622 NAP1L2Q9ULW6 460 aaPredicted RBP22.77■■□□□ 1.24
LPCAT1-202ENST00000475622 HSCBQ8IWL3 235 aa22.77■■□□□ 1.24
LPCAT1-202ENST00000475622 NRDCO43847 1150 aa22.75■■□□□ 1.23
LPCAT1-202ENST00000475622 TNIKQ9UKE5 1360 aa22.75■■□□□ 1.23
LPCAT1-202ENST00000475622 GOLGA6L4A6NEF3 574 aa22.74■■□□□ 1.23
LPCAT1-202ENST00000475622 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
LPCAT1-202ENST00000475622 TMF1P82094 1093 aa22.71■■□□□ 1.23
LPCAT1-202ENST00000475622 SPRYD3Q8NCJ5 442 aa22.71■■□□□ 1.23
LPCAT1-202ENST00000475622 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
LPCAT1-202ENST00000475622 CCDC180Q9P1Z9 1646 aa22.69■■□□□ 1.22
LPCAT1-202ENST00000475622 DCAF11Q8TEB1 546 aa22.69■■□□□ 1.22
LPCAT1-202ENST00000475622 DEKP35659 375 aaKnown RBP22.69■■□□□ 1.22
LPCAT1-202ENST00000475622 KIF27Q86VH2 1401 aa22.68■■□□□ 1.22
LPCAT1-202ENST00000475622 NPHP1O15259 732 aa22.67■■□□□ 1.22
LPCAT1-202ENST00000475622 CHAF1AQ13111 956 aaPredicted RBP22.67■■□□□ 1.22
LPCAT1-202ENST00000475622 L1TD1Q5T7N2 865 aaKnown RBP22.67■■□□□ 1.22
LPCAT1-202ENST00000475622 CEP164Q9UPV0 1460 aa22.67■■□□□ 1.22
LPCAT1-202ENST00000475622 MSNP26038 577 aaKnown RBP22.66■■□□□ 1.22
LPCAT1-202ENST00000475622 RBM19Q9Y4C8 960 aaKnown RBP22.65■■□□□ 1.22
LPCAT1-202ENST00000475622 MCCP23508 829 aa22.62■■□□□ 1.21
LPCAT1-202ENST00000475622 CCER2I3L3R5 266 aa22.62■■□□□ 1.21
LPCAT1-202ENST00000475622 GOLGA2Q08379 1002 aa22.61■■□□□ 1.21
LPCAT1-202ENST00000475622 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
LPCAT1-202ENST00000475622 CCNB3Q8WWL7 1395 aa22.6■■□□□ 1.21
LPCAT1-202ENST00000475622 SOX12O15370 315 aa22.59■■□□□ 1.21
LPCAT1-202ENST00000475622 DRC7Q8IY82 874 aa22.59■■□□□ 1.21
LPCAT1-202ENST00000475622 SRPK2P78362 688 aaKnown RBP22.57■■□□□ 1.2
LPCAT1-202ENST00000475622 TIMELESSQ9UNS1 1208 aa22.56■■□□□ 1.2
LPCAT1-202ENST00000475622 HSPA5P11021 654 aaKnown RBP22.55■■□□□ 1.2
LPCAT1-202ENST00000475622 APBB1O00213 710 aa22.54■■□□□ 1.2
LPCAT1-202ENST00000475622 SAFB2Q14151 953 aaKnown RBP eCLIP22.52■■□□□ 1.2
LPCAT1-202ENST00000475622 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
LPCAT1-202ENST00000475622 IPO8O15397 1037 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms