RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 GABBR2O75899 941 aa13.13□□□□□ -0.31
SRRM1-210ENST00000474843 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
SRRM1-210ENST00000474843 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
SRRM1-210ENST00000474843 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
SRRM1-210ENST00000474843 GSE1Q14687 1217 aa13.1□□□□□ -0.31
SRRM1-210ENST00000474843 CLCN6P51797 869 aa13.07□□□□□ -0.32
SRRM1-210ENST00000474843 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
SRRM1-210ENST00000474843 DCAF8L2P0C7V8 631 aa13□□□□□ -0.33
SRRM1-210ENST00000474843 PYGBP11216 843 aa13□□□□□ -0.33
SRRM1-210ENST00000474843 RGL2O15211 777 aa12.97□□□□□ -0.33
SRRM1-210ENST00000474843 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
SRRM1-210ENST00000474843 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
SRRM1-210ENST00000474843 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
SRRM1-210ENST00000474843 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
SRRM1-210ENST00000474843 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
SRRM1-210ENST00000474843 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
SRRM1-210ENST00000474843 DCBLD2Q96PD2 775 aa12.86□□□□□ -0.35
SRRM1-210ENST00000474843 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
SRRM1-210ENST00000474843 RIOK3O14730 519 aaKnown RBP12.82□□□□□ -0.36
SRRM1-210ENST00000474843 LHX8Q68G74 356 aa12.82□□□□□ -0.36
SRRM1-210ENST00000474843 MAP3K13O43283 966 aa12.81□□□□□ -0.36
SRRM1-210ENST00000474843 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
SRRM1-210ENST00000474843 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
SRRM1-210ENST00000474843 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
SRRM1-210ENST00000474843 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
SRRM1-210ENST00000474843 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
SRRM1-210ENST00000474843 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
SRRM1-210ENST00000474843 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
SRRM1-210ENST00000474843 CHGAP10645 457 aaKnown RBP12.73□□□□□ -0.37
SRRM1-210ENST00000474843 MS4A3Q96HJ5 214 aa12.72□□□□□ -0.37
SRRM1-210ENST00000474843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
SRRM1-210ENST00000474843 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
SRRM1-210ENST00000474843 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
SRRM1-210ENST00000474843 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
SRRM1-210ENST00000474843 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
SRRM1-210ENST00000474843 STK25O00506 426 aa12.67□□□□□ -0.38
SRRM1-210ENST00000474843 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
SRRM1-210ENST00000474843 PSEN1P49768 467 aa12.65□□□□□ -0.38
SRRM1-210ENST00000474843 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
SRRM1-210ENST00000474843 BCL11BQ9C0K0 894 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-210ENST00000474843 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
SRRM1-210ENST00000474843 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
SRRM1-210ENST00000474843 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
SRRM1-210ENST00000474843 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
SRRM1-210ENST00000474843 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
SRRM1-210ENST00000474843 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
SRRM1-210ENST00000474843 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.52□□□□□ -0.41
SRRM1-210ENST00000474843 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
SRRM1-210ENST00000474843 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
SRRM1-210ENST00000474843 TIE1P35590 1138 aa12.5□□□□□ -0.41
SRRM1-210ENST00000474843 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-210ENST00000474843 PAXIP1Q6ZW49 1069 aaPredicted RBP12.48□□□□□ -0.41
SRRM1-210ENST00000474843 CFAP44Q96MT7 982 aa12.48□□□□□ -0.41
SRRM1-210ENST00000474843 PLCB2Q00722 1185 aa12.46□□□□□ -0.41
SRRM1-210ENST00000474843 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
SRRM1-210ENST00000474843 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
SRRM1-210ENST00000474843 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
SRRM1-210ENST00000474843 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
SRRM1-210ENST00000474843 C7P10643 843 aa12.44□□□□□ -0.42
SRRM1-210ENST00000474843 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
SRRM1-210ENST00000474843 PELP1Q8IZL8 1130 aaKnown RBP12.43□□□□□ -0.42
SRRM1-210ENST00000474843 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
SRRM1-210ENST00000474843 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
SRRM1-210ENST00000474843 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
SRRM1-210ENST00000474843 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
SRRM1-210ENST00000474843 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
SRRM1-210ENST00000474843 MFRPQ9BY79 579 aa12.38□□□□□ -0.43
SRRM1-210ENST00000474843 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
SRRM1-210ENST00000474843 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
SRRM1-210ENST00000474843 POTEB2H3BUK9 544 aa12.35□□□□□ -0.43
SRRM1-210ENST00000474843 HAP1P54257 671 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-210ENST00000474843 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
SRRM1-210ENST00000474843 SOX12O15370 315 aa12.32□□□□□ -0.44
SRRM1-210ENST00000474843 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
SRRM1-210ENST00000474843 MAMSTRQ6ZN01 415 aa12.31□□□□□ -0.44
SRRM1-210ENST00000474843 NLRP6P59044 892 aa12.3□□□□□ -0.44
SRRM1-210ENST00000474843 FBXO22Q8NEZ5 403 aa12.3□□□□□ -0.44
SRRM1-210ENST00000474843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.445e-7■■■■□ 23.9
SRRM1-210ENST00000474843 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
SRRM1-210ENST00000474843 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
SRRM1-210ENST00000474843 PPP1R37O75864 691 aa12.24□□□□□ -0.45
SRRM1-210ENST00000474843 SEC24BO95487 1268 aa12.23□□□□□ -0.45
SRRM1-210ENST00000474843 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
SRRM1-210ENST00000474843 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
SRRM1-210ENST00000474843 IER5LQ5T953 404 aa12.22□□□□□ -0.45
SRRM1-210ENST00000474843 SCUBE2Q9NQ36 999 aa12.22□□□□□ -0.45
SRRM1-210ENST00000474843 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
SRRM1-210ENST00000474843 PLCG2P16885 1265 aa12.19□□□□□ -0.46
SRRM1-210ENST00000474843 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
SRRM1-210ENST00000474843 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-210ENST00000474843 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
SRRM1-210ENST00000474843 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
SRRM1-210ENST00000474843 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
SRRM1-210ENST00000474843 POTEJP0CG39 1038 aa12.15□□□□□ -0.46
SRRM1-210ENST00000474843 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
SRRM1-210ENST00000474843 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
SRRM1-210ENST00000474843 KDM2AQ9Y2K7 1162 aa12.06□□□□□ -0.48
SRRM1-210ENST00000474843 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
SRRM1-210ENST00000474843 POTEMA6NI47 508 aa12.05□□□□□ -0.48
SRRM1-210ENST00000474843 G3V3G9 751 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms