RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 SCUBE2Q9NQ36 999 aa13.33□□□□□ -0.28
HMGN1P10-201ENST00000474557 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
HMGN1P10-201ENST00000474557 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
HMGN1P10-201ENST00000474557 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
HMGN1P10-201ENST00000474557 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P10-201ENST00000474557 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
HMGN1P10-201ENST00000474557 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
HMGN1P10-201ENST00000474557 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
HMGN1P10-201ENST00000474557 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P10-201ENST00000474557 LCE2DQ5TA82 110 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P10-201ENST00000474557 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
HMGN1P10-201ENST00000474557 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
HMGN1P10-201ENST00000474557 SEC24BO95487 1268 aa13.04□□□□□ -0.32
HMGN1P10-201ENST00000474557 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
HMGN1P10-201ENST00000474557 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
HMGN1P10-201ENST00000474557 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
HMGN1P10-201ENST00000474557 TIE1P35590 1138 aa13.01□□□□□ -0.33
HMGN1P10-201ENST00000474557 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
HMGN1P10-201ENST00000474557 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
HMGN1P10-201ENST00000474557 MAP3K13O43283 966 aa12.92□□□□□ -0.34
HMGN1P10-201ENST00000474557 IER5LQ5T953 404 aa12.89□□□□□ -0.35
HMGN1P10-201ENST00000474557 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
HMGN1P10-201ENST00000474557 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
HMGN1P10-201ENST00000474557 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
HMGN1P10-201ENST00000474557 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
HMGN1P10-201ENST00000474557 MIER1Q8N108 512 aa12.83□□□□□ -0.36
HMGN1P10-201ENST00000474557 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
HMGN1P10-201ENST00000474557 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
HMGN1P10-201ENST00000474557 ST18O60284 1047 aa12.8□□□□□ -0.36
HMGN1P10-201ENST00000474557 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
HMGN1P10-201ENST00000474557 PROM2Q8N271 834 aa12.78□□□□□ -0.36
HMGN1P10-201ENST00000474557 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
HMGN1P10-201ENST00000474557 PLCG2P16885 1265 aa12.75□□□□□ -0.37
HMGN1P10-201ENST00000474557 SNPHO15079 494 aa12.72□□□□□ -0.37
HMGN1P10-201ENST00000474557 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
HMGN1P10-201ENST00000474557 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
HMGN1P10-201ENST00000474557 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
HMGN1P10-201ENST00000474557 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
HMGN1P10-201ENST00000474557 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
HMGN1P10-201ENST00000474557 TMEM106CQ9BVX2 250 aa12.67□□□□□ -0.38
HMGN1P10-201ENST00000474557 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
HMGN1P10-201ENST00000474557 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
HMGN1P10-201ENST00000474557 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
HMGN1P10-201ENST00000474557 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
HMGN1P10-201ENST00000474557 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
HMGN1P10-201ENST00000474557 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
HMGN1P10-201ENST00000474557 NUBP1P53384 320 aa12.51□□□□□ -0.41
HMGN1P10-201ENST00000474557 MARVELD3Q96A59 401 aa12.51□□□□□ -0.41
HMGN1P10-201ENST00000474557 EMP3P54852 163 aa12.46□□□□□ -0.41
HMGN1P10-201ENST00000474557 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
HMGN1P10-201ENST00000474557 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
HMGN1P10-201ENST00000474557 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
HMGN1P10-201ENST00000474557 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
HMGN1P10-201ENST00000474557 PYGBP11216 843 aa12.34□□□□□ -0.43
HMGN1P10-201ENST00000474557 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
HMGN1P10-201ENST00000474557 MKRN3Q13064 507 aaKnown RBP12.33□□□□□ -0.44
HMGN1P10-201ENST00000474557 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
HMGN1P10-201ENST00000474557 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
HMGN1P10-201ENST00000474557 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
HMGN1P10-201ENST00000474557 KRTAP3-2Q9BYR7 98 aa12.28□□□□□ -0.44
HMGN1P10-201ENST00000474557 PDCD7Q8N8D1 485 aaKnown RBP12.26□□□□□ -0.45
HMGN1P10-201ENST00000474557 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
HMGN1P10-201ENST00000474557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.45
HMGN1P10-201ENST00000474557 G3V3G9 751 aa12.2□□□□□ -0.46
HMGN1P10-201ENST00000474557 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
HMGN1P10-201ENST00000474557 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
HMGN1P10-201ENST00000474557 GSE1Q14687 1217 aa12.16□□□□□ -0.46
HMGN1P10-201ENST00000474557 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
HMGN1P10-201ENST00000474557 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
HMGN1P10-201ENST00000474557 ERBB3P21860 1342 aa12.11□□□□□ -0.47
HMGN1P10-201ENST00000474557 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
HMGN1P10-201ENST00000474557 PSEN1P49768 467 aa12.08□□□□□ -0.48
HMGN1P10-201ENST00000474557 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
HMGN1P10-201ENST00000474557 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
HMGN1P10-201ENST00000474557 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
HMGN1P10-201ENST00000474557 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
HMGN1P10-201ENST00000474557 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
HMGN1P10-201ENST00000474557 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
HMGN1P10-201ENST00000474557 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
HMGN1P10-201ENST00000474557 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
HMGN1P10-201ENST00000474557 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
HMGN1P10-201ENST00000474557 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
HMGN1P10-201ENST00000474557 FKBP8Q14318 412 aa11.99□□□□□ -0.49
HMGN1P10-201ENST00000474557 PTGER2P43116 358 aa11.98□□□□□ -0.49
HMGN1P10-201ENST00000474557 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
HMGN1P10-201ENST00000474557 VARS2Q5ST30 1063 aaKnown RBP11.96□□□□□ -0.49
HMGN1P10-201ENST00000474557 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
HMGN1P10-201ENST00000474557 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
HMGN1P10-201ENST00000474557 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
HMGN1P10-201ENST00000474557 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
HMGN1P10-201ENST00000474557 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
HMGN1P10-201ENST00000474557 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P10-201ENST00000474557 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
HMGN1P10-201ENST00000474557 MICALL2Q8IY33 904 aa11.71□□□□□ -0.53
HMGN1P10-201ENST00000474557 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
HMGN1P10-201ENST00000474557 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
HMGN1P10-201ENST00000474557 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGN1P10-201ENST00000474557 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
HMGN1P10-201ENST00000474557 ARSIQ5FYB1 569 aa11.66□□□□□ -0.54
HMGN1P10-201ENST00000474557 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms