RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
TMEM50B-208ENST00000474272 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
TMEM50B-208ENST00000474272 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
TMEM50B-208ENST00000474272 MAP3K13O43283 966 aa12.73□□□□□ -0.37
TMEM50B-208ENST00000474272 NUBP1P53384 320 aa12.73□□□□□ -0.37
TMEM50B-208ENST00000474272 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
TMEM50B-208ENST00000474272 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
TMEM50B-208ENST00000474272 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
TMEM50B-208ENST00000474272 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
TMEM50B-208ENST00000474272 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
TMEM50B-208ENST00000474272 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
TMEM50B-208ENST00000474272 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
TMEM50B-208ENST00000474272 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
TMEM50B-208ENST00000474272 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
TMEM50B-208ENST00000474272 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
TMEM50B-208ENST00000474272 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
TMEM50B-208ENST00000474272 PCDHB13Q9Y5F0 798 aa12.59□□□□□ -0.39
TMEM50B-208ENST00000474272 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
TMEM50B-208ENST00000474272 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
TMEM50B-208ENST00000474272 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
TMEM50B-208ENST00000474272 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
TMEM50B-208ENST00000474272 C7P10643 843 aa12.55□□□□□ -0.4
TMEM50B-208ENST00000474272 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
TMEM50B-208ENST00000474272 PYGBP11216 843 aa12.53□□□□□ -0.4
TMEM50B-208ENST00000474272 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
TMEM50B-208ENST00000474272 POTEJP0CG39 1038 aa12.52□□□□□ -0.41
TMEM50B-208ENST00000474272 TIE1P35590 1138 aa12.52□□□□□ -0.41
TMEM50B-208ENST00000474272 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
TMEM50B-208ENST00000474272 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
TMEM50B-208ENST00000474272 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
TMEM50B-208ENST00000474272 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
TMEM50B-208ENST00000474272 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
TMEM50B-208ENST00000474272 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
TMEM50B-208ENST00000474272 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
TMEM50B-208ENST00000474272 SEC24BO95487 1268 aa12.38□□□□□ -0.43
TMEM50B-208ENST00000474272 GSE1Q14687 1217 aa12.35□□□□□ -0.43
TMEM50B-208ENST00000474272 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
TMEM50B-208ENST00000474272 MAMSTRQ6ZN01 415 aa12.31□□□□□ -0.44
TMEM50B-208ENST00000474272 CIZ1Q9ULV3 898 aaPredicted RBP12.31□□□□□ -0.44
TMEM50B-208ENST00000474272 IER5LQ5T953 404 aa12.3□□□□□ -0.44
TMEM50B-208ENST00000474272 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
TMEM50B-208ENST00000474272 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
TMEM50B-208ENST00000474272 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
TMEM50B-208ENST00000474272 PLCG2P16885 1265 aa12.23□□□□□ -0.45
TMEM50B-208ENST00000474272 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
TMEM50B-208ENST00000474272 FAM163AQ96GL9 167 aaPredicted RBP12.2□□□□□ -0.46
TMEM50B-208ENST00000474272 PSEN1P49768 467 aa12.19□□□□□ -0.46
TMEM50B-208ENST00000474272 OCEL1Q9H607 264 aa12.18□□□□□ -0.46
TMEM50B-208ENST00000474272 POTEMA6NI47 508 aa12.17□□□□□ -0.46
TMEM50B-208ENST00000474272 LCE2DQ5TA82 110 aaPredicted RBP12.15□□□□□ -0.46
TMEM50B-208ENST00000474272 POTEGQ6S5H5 508 aa12.15□□□□□ -0.46
TMEM50B-208ENST00000474272 GOLGA2Q08379 1002 aa12.12□□□□□ -0.47
TMEM50B-208ENST00000474272 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
TMEM50B-208ENST00000474272 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
TMEM50B-208ENST00000474272 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
TMEM50B-208ENST00000474272 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
TMEM50B-208ENST00000474272 PLSCR2Q9NRY7 297 aa12.07□□□□□ -0.48
TMEM50B-208ENST00000474272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.489e-6■□□□□ 9.4
TMEM50B-208ENST00000474272 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
TMEM50B-208ENST00000474272 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
TMEM50B-208ENST00000474272 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.99□□□□□ -0.49
TMEM50B-208ENST00000474272 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
TMEM50B-208ENST00000474272 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
TMEM50B-208ENST00000474272 ST18O60284 1047 aa11.95□□□□□ -0.5
TMEM50B-208ENST00000474272 ILDR1Q86SU0 546 aaPredicted RBP11.94□□□□□ -0.5
TMEM50B-208ENST00000474272 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
TMEM50B-208ENST00000474272 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
TMEM50B-208ENST00000474272 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
TMEM50B-208ENST00000474272 RIOK3O14730 519 aaKnown RBP11.92□□□□□ -0.5
TMEM50B-208ENST00000474272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
TMEM50B-208ENST00000474272 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
TMEM50B-208ENST00000474272 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
TMEM50B-208ENST00000474272 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
TMEM50B-208ENST00000474272 G3V3G9 751 aa11.83□□□□□ -0.52
TMEM50B-208ENST00000474272 VGFO15240 615 aaPredicted RBP11.83□□□□□ -0.52
TMEM50B-208ENST00000474272 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
TMEM50B-208ENST00000474272 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
TMEM50B-208ENST00000474272 SNPHO15079 494 aa11.81□□□□□ -0.52
TMEM50B-208ENST00000474272 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
TMEM50B-208ENST00000474272 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
TMEM50B-208ENST00000474272 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
TMEM50B-208ENST00000474272 PKD2Q13563 968 aa11.76□□□□□ -0.53
TMEM50B-208ENST00000474272 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
TMEM50B-208ENST00000474272 SOX12O15370 315 aa11.74□□□□□ -0.53
TMEM50B-208ENST00000474272 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
TMEM50B-208ENST00000474272 STK24Q9Y6E0 443 aa11.74□□□□□ -0.53
TMEM50B-208ENST00000474272 RGL2O15211 777 aa11.72□□□□□ -0.53
TMEM50B-208ENST00000474272 MICALL2Q8IY33 904 aa11.71□□□□□ -0.53
TMEM50B-208ENST00000474272 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
TMEM50B-208ENST00000474272 STK25O00506 426 aa11.69□□□□□ -0.54
TMEM50B-208ENST00000474272 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
TMEM50B-208ENST00000474272 EMP3P54852 163 aa11.67□□□□□ -0.54
TMEM50B-208ENST00000474272 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
TMEM50B-208ENST00000474272 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
TMEM50B-208ENST00000474272 FBXO22Q8NEZ5 403 aa11.65□□□□□ -0.54
TMEM50B-208ENST00000474272 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
TMEM50B-208ENST00000474272 FAM205CA6NFA0 338 aa11.64□□□□□ -0.55
TMEM50B-208ENST00000474272 NLRP6P59044 892 aa11.64□□□□□ -0.55
TMEM50B-208ENST00000474272 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
TMEM50B-208ENST00000474272 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms