RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
FN1-219ENST00000474036 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
FN1-219ENST00000474036 NUBP1P53384 320 aa13.37□□□□□ -0.27
FN1-219ENST00000474036 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
FN1-219ENST00000474036 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
FN1-219ENST00000474036 MAP3K13O43283 966 aa13.3□□□□□ -0.28
FN1-219ENST00000474036 POTEB2H3BUK9 544 aa13.29□□□□□ -0.28
FN1-219ENST00000474036 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
FN1-219ENST00000474036 ASTLQ6HA08 431 aaPredicted RBP13.28□□□□□ -0.28
FN1-219ENST00000474036 FBXO3Q9UK99 471 aa13.25□□□□□ -0.29
FN1-219ENST00000474036 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
FN1-219ENST00000474036 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
FN1-219ENST00000474036 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
FN1-219ENST00000474036 VASPP50552 380 aaPredicted RBP13.2□□□□□ -0.3
FN1-219ENST00000474036 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
FN1-219ENST00000474036 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
FN1-219ENST00000474036 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
FN1-219ENST00000474036 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
FN1-219ENST00000474036 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
FN1-219ENST00000474036 IFNL1Q8IU54 200 aa13.12□□□□□ -0.31
FN1-219ENST00000474036 SLC39A7Q92504 469 aa13.11□□□□□ -0.31
FN1-219ENST00000474036 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
FN1-219ENST00000474036 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
FN1-219ENST00000474036 C7P10643 843 aa13.1□□□□□ -0.31
FN1-219ENST00000474036 TIE1P35590 1138 aa13.1□□□□□ -0.31
FN1-219ENST00000474036 DCAF8Q5TAQ9 597 aa13.1□□□□□ -0.31
FN1-219ENST00000474036 PYGBP11216 843 aa13.08□□□□□ -0.32
FN1-219ENST00000474036 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
FN1-219ENST00000474036 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
FN1-219ENST00000474036 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
FN1-219ENST00000474036 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
FN1-219ENST00000474036 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
FN1-219ENST00000474036 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
FN1-219ENST00000474036 TMEM106CQ9BVX2 250 aa12.97□□□□□ -0.33
FN1-219ENST00000474036 GSE1Q14687 1217 aa12.9□□□□□ -0.34
FN1-219ENST00000474036 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
FN1-219ENST00000474036 SEC24BO95487 1268 aa12.87□□□□□ -0.35
FN1-219ENST00000474036 IER5LQ5T953 404 aa12.86□□□□□ -0.35
FN1-219ENST00000474036 CHRM1P11229 460 aaPredicted RBP12.84□□□□□ -0.35
FN1-219ENST00000474036 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
FN1-219ENST00000474036 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
FN1-219ENST00000474036 MAMSTRQ6ZN01 415 aa12.81□□□□□ -0.36
FN1-219ENST00000474036 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
FN1-219ENST00000474036 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
FN1-219ENST00000474036 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
FN1-219ENST00000474036 PLCG2P16885 1265 aa12.74□□□□□ -0.37
FN1-219ENST00000474036 PSEN1P49768 467 aa12.74□□□□□ -0.37
FN1-219ENST00000474036 OCEL1Q9H607 264 aa12.71□□□□□ -0.37
FN1-219ENST00000474036 PDCD7Q8N8D1 485 aaKnown RBP12.68□□□□□ -0.38
FN1-219ENST00000474036 POTEMA6NI47 508 aa12.67□□□□□ -0.38
FN1-219ENST00000474036 FAM163AQ96GL9 167 aaPredicted RBP12.67□□□□□ -0.38
FN1-219ENST00000474036 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
FN1-219ENST00000474036 POTEGQ6S5H5 508 aa12.65□□□□□ -0.38
FN1-219ENST00000474036 SLAIN1Q8ND83 568 aa12.62□□□□□ -0.39
FN1-219ENST00000474036 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
FN1-219ENST00000474036 RNF25Q96BH1 459 aaPredicted RBP12.6□□□□□ -0.39
FN1-219ENST00000474036 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
FN1-219ENST00000474036 CABP2Q9NPB3 220 aa12.59□□□□□ -0.39
FN1-219ENST00000474036 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
FN1-219ENST00000474036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.4
FN1-219ENST00000474036 ILDR1Q86SU0 546 aaPredicted RBP12.57□□□□□ -0.4
FN1-219ENST00000474036 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
FN1-219ENST00000474036 NISCHQ9Y2I1 1504 aa12.52□□□□□ -0.4
FN1-219ENST00000474036 EFCAB3Q8N7B9 438 aa12.49□□□□□ -0.41
FN1-219ENST00000474036 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
FN1-219ENST00000474036 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
FN1-219ENST00000474036 ST18O60284 1047 aa12.48□□□□□ -0.41
FN1-219ENST00000474036 PLSCR2Q9NRY7 297 aa12.48□□□□□ -0.41
FN1-219ENST00000474036 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
FN1-219ENST00000474036 L3MBTL3Q96JM7 780 aaPredicted RBP12.45□□□□□ -0.42
FN1-219ENST00000474036 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
FN1-219ENST00000474036 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
FN1-219ENST00000474036 BOLA1Q9Y3E2 137 aa12.39□□□□□ -0.43
FN1-219ENST00000474036 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
FN1-219ENST00000474036 PKD2Q13563 968 aa12.37□□□□□ -0.43
FN1-219ENST00000474036 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
FN1-219ENST00000474036 PHF8Q9UPP1 1060 aa12.34□□□□□ -0.43
FN1-219ENST00000474036 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
FN1-219ENST00000474036 ECM2O94769 699 aaPredicted RBP12.32□□□□□ -0.44
FN1-219ENST00000474036 MARVELD3Q96A59 401 aa12.32□□□□□ -0.44
FN1-219ENST00000474036 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
FN1-219ENST00000474036 RGL2O15211 777 aa12.31□□□□□ -0.44
FN1-219ENST00000474036 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
FN1-219ENST00000474036 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
FN1-219ENST00000474036 SNPHO15079 494 aa12.29□□□□□ -0.44
FN1-219ENST00000474036 SOX12O15370 315 aa12.28□□□□□ -0.44
FN1-219ENST00000474036 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
FN1-219ENST00000474036 MICALL2Q8IY33 904 aa12.27□□□□□ -0.45
FN1-219ENST00000474036 G3V3G9 751 aa12.25□□□□□ -0.45
FN1-219ENST00000474036 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
FN1-219ENST00000474036 STK24Q9Y6E0 443 aa12.25□□□□□ -0.45
FN1-219ENST00000474036 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
FN1-219ENST00000474036 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
FN1-219ENST00000474036 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
FN1-219ENST00000474036 STK25O00506 426 aa12.21□□□□□ -0.45
FN1-219ENST00000474036 MFRPQ9BY79 579 aa12.21□□□□□ -0.45
FN1-219ENST00000474036 NLRP6P59044 892 aa12.16□□□□□ -0.46
FN1-219ENST00000474036 EMP3P54852 163 aa12.15□□□□□ -0.46
FN1-219ENST00000474036 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
FN1-219ENST00000474036 FAM205CA6NFA0 338 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms