RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
CNOT4-209ENST00000473470 DCAF8Q5TAQ9 597 aa12.82□□□□□ -0.36
CNOT4-209ENST00000473470 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
CNOT4-209ENST00000473470 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-209ENST00000473470 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
CNOT4-209ENST00000473470 EVX2Q03828 476 aa12.73□□□□□ -0.37
CNOT4-209ENST00000473470 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
CNOT4-209ENST00000473470 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
CNOT4-209ENST00000473470 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
CNOT4-209ENST00000473470 CHRM1P11229 460 aaPredicted RBP12.67□□□□□ -0.38
CNOT4-209ENST00000473470 KIF12Q96FN5 646 aa12.66□□□□□ -0.38
CNOT4-209ENST00000473470 PYGBP11216 843 aa12.65□□□□□ -0.38
CNOT4-209ENST00000473470 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
CNOT4-209ENST00000473470 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
CNOT4-209ENST00000473470 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
CNOT4-209ENST00000473470 MAP3K13O43283 966 aa12.6□□□□□ -0.39
CNOT4-209ENST00000473470 GABBR2O75899 941 aa12.6□□□□□ -0.39
CNOT4-209ENST00000473470 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
CNOT4-209ENST00000473470 PKD2Q13563 968 aa12.59□□□□□ -0.39
CNOT4-209ENST00000473470 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
CNOT4-209ENST00000473470 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
CNOT4-209ENST00000473470 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
CNOT4-209ENST00000473470 IFNL1Q8IU54 200 aa12.51□□□□□ -0.41
CNOT4-209ENST00000473470 TIE1P35590 1138 aa12.5□□□□□ -0.41
CNOT4-209ENST00000473470 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
CNOT4-209ENST00000473470 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
CNOT4-209ENST00000473470 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-209ENST00000473470 PDAP1Q13442 181 aaKnown RBP12.47□□□□□ -0.41
CNOT4-209ENST00000473470 RNF25Q96BH1 459 aaPredicted RBP12.46□□□□□ -0.41
CNOT4-209ENST00000473470 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
CNOT4-209ENST00000473470 RGL2O15211 777 aa12.42□□□□□ -0.42
CNOT4-209ENST00000473470 PSEN1P49768 467 aa12.4□□□□□ -0.42
CNOT4-209ENST00000473470 ASTLQ6HA08 431 aaPredicted RBP12.4□□□□□ -0.42
CNOT4-209ENST00000473470 TMEM106CQ9BVX2 250 aa12.39□□□□□ -0.43
CNOT4-209ENST00000473470 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
CNOT4-209ENST00000473470 TTLL13PA6NNM8 815 aa12.37□□□□□ -0.43
CNOT4-209ENST00000473470 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
CNOT4-209ENST00000473470 ATMINO43313 823 aaPredicted RBP12.35□□□□□ -0.43
CNOT4-209ENST00000473470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-209ENST00000473470 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
CNOT4-209ENST00000473470 ZFP91Q96JP5 570 aaPredicted RBP12.33□□□□□ -0.44
CNOT4-209ENST00000473470 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
CNOT4-209ENST00000473470 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
CNOT4-209ENST00000473470 STK25O00506 426 aa12.29□□□□□ -0.44
CNOT4-209ENST00000473470 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
CNOT4-209ENST00000473470 IER5LQ5T953 404 aa12.29□□□□□ -0.44
CNOT4-209ENST00000473470 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
CNOT4-209ENST00000473470 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
CNOT4-209ENST00000473470 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
CNOT4-209ENST00000473470 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
CNOT4-209ENST00000473470 MKRN3Q13064 507 aaKnown RBP12.24□□□□□ -0.45
CNOT4-209ENST00000473470 CABP2Q9NPB3 220 aa12.24□□□□□ -0.45
CNOT4-209ENST00000473470 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
CNOT4-209ENST00000473470 C7P10643 843 aa12.23□□□□□ -0.45
CNOT4-209ENST00000473470 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
CNOT4-209ENST00000473470 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
CNOT4-209ENST00000473470 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
CNOT4-209ENST00000473470 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
CNOT4-209ENST00000473470 SOX12O15370 315 aa12.15□□□□□ -0.46
CNOT4-209ENST00000473470 SEC24BO95487 1268 aa12.15□□□□□ -0.46
CNOT4-209ENST00000473470 PLCG2P16885 1265 aa12.15□□□□□ -0.46
CNOT4-209ENST00000473470 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
CNOT4-209ENST00000473470 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
CNOT4-209ENST00000473470 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-209ENST00000473470 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
CNOT4-209ENST00000473470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNOT4-209ENST00000473470 NLRP6P59044 892 aa12.09□□□□□ -0.47
CNOT4-209ENST00000473470 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
CNOT4-209ENST00000473470 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
CNOT4-209ENST00000473470 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
CNOT4-209ENST00000473470 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
CNOT4-209ENST00000473470 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
CNOT4-209ENST00000473470 COLQQ9Y215 455 aaPredicted RBP12.02□□□□□ -0.49
CNOT4-209ENST00000473470 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-209ENST00000473470 POTEFA5A3E0 1075 aa12□□□□□ -0.49
CNOT4-209ENST00000473470 G3V3G9 751 aa12□□□□□ -0.49
CNOT4-209ENST00000473470 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
CNOT4-209ENST00000473470 L3MBTL3Q96JM7 780 aaPredicted RBP12□□□□□ -0.49
CNOT4-209ENST00000473470 MAMSTRQ6ZN01 415 aa11.97□□□□□ -0.49
CNOT4-209ENST00000473470 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.49
CNOT4-209ENST00000473470 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
CNOT4-209ENST00000473470 LHX8Q68G74 356 aa11.94□□□□□ -0.5
CNOT4-209ENST00000473470 SCUBE2Q9NQ36 999 aa11.94□□□□□ -0.5
CNOT4-209ENST00000473470 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
CNOT4-209ENST00000473470 C3orf67Q6ZVT6 689 aa11.91□□□□□ -0.5
CNOT4-209ENST00000473470 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
CNOT4-209ENST00000473470 MICALL2Q8IY33 904 aa11.87□□□□□ -0.51
CNOT4-209ENST00000473470 POTEB2H3BUK9 544 aa11.86□□□□□ -0.51
CNOT4-209ENST00000473470 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
CNOT4-209ENST00000473470 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
CNOT4-209ENST00000473470 TMEM121BQ9BXQ6 578 aaPredicted RBP11.85□□□□□ -0.51
CNOT4-209ENST00000473470 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.85□□□□□ -0.51
CNOT4-209ENST00000473470 PAXIP1Q6ZW49 1069 aaPredicted RBP11.8□□□□□ -0.52
CNOT4-209ENST00000473470 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
CNOT4-209ENST00000473470 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
CNOT4-209ENST00000473470 PPP1R37O75864 691 aa11.77□□□□□ -0.53
CNOT4-209ENST00000473470 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
CNOT4-209ENST00000473470 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
CNOT4-209ENST00000473470 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
CNOT4-209ENST00000473470 TMC2Q8TDI7 906 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms