RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
ITGB1-209ENST00000472147 CFTRP13569 1480 aa11.05□□□□□ -0.64
ITGB1-209ENST00000472147 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
ITGB1-209ENST00000472147 FBLN2P98095 1184 aa11□□□□□ -0.65
ITGB1-209ENST00000472147 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
ITGB1-209ENST00000472147 WIZO95785 1651 aa10.94□□□□□ -0.66
ITGB1-209ENST00000472147 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
ITGB1-209ENST00000472147 RSF1Q96T23 1441 aaPredicted RBP10.93□□□□□ -0.66
ITGB1-209ENST00000472147 FKBP8Q14318 412 aa10.92□□□□□ -0.66
ITGB1-209ENST00000472147 LHX8Q68G74 356 aa10.92□□□□□ -0.66
ITGB1-209ENST00000472147 IFT140Q96RY7 1462 aa10.91□□□□□ -0.66
ITGB1-209ENST00000472147 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
ITGB1-209ENST00000472147 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
ITGB1-209ENST00000472147 ZNF608Q9ULD9 1512 aaPredicted RBP10.85□□□□□ -0.67
ITGB1-209ENST00000472147 RIMBP3CA6NJZ7 1639 aa10.85□□□□□ -0.67
ITGB1-209ENST00000472147 RIMBP3BA6NNM3 1639 aa10.85□□□□□ -0.67
ITGB1-209ENST00000472147 RIMBP3Q9UFD9 1639 aa10.85□□□□□ -0.67
ITGB1-209ENST00000472147 TOP2AP11388 1531 aaKnown RBP10.84□□□□□ -0.67
ITGB1-209ENST00000472147 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
ITGB1-209ENST00000472147 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
ITGB1-209ENST00000472147 CCDC88BA6NC98 1476 aa10.81□□□□□ -0.68
ITGB1-209ENST00000472147 AQRO60306 1485 aaKnown RBP eCLIP10.8□□□□□ -0.68
ITGB1-209ENST00000472147 TOPBP1Q92547 1522 aa10.79□□□□□ -0.68
ITGB1-209ENST00000472147 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
ITGB1-209ENST00000472147 GABBR2O75899 941 aa10.78□□□□□ -0.68
ITGB1-209ENST00000472147 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
ITGB1-209ENST00000472147 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
ITGB1-209ENST00000472147 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
ITGB1-209ENST00000472147 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
ITGB1-209ENST00000472147 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
ITGB1-209ENST00000472147 SOGA1O94964 1423 aa10.74□□□□□ -0.69
ITGB1-209ENST00000472147 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
ITGB1-209ENST00000472147 PROM2Q8N271 834 aa10.72□□□□□ -0.69
ITGB1-209ENST00000472147 ARAP1Q96P48 1450 aa10.72□□□□□ -0.69
ITGB1-209ENST00000472147 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
ITGB1-209ENST00000472147 SSUH2Q9Y2M2 353 aa10.69□□□□□ -0.7
ITGB1-209ENST00000472147 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
ITGB1-209ENST00000472147 POLA1P09884 1462 aaPredicted RBP10.68□□□□□ -0.7
ITGB1-209ENST00000472147 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
ITGB1-209ENST00000472147 EIF4G3O43432 1585 aaKnown RBP10.66□□□□□ -0.7
ITGB1-209ENST00000472147 RAD54L2Q9Y4B4 1467 aa10.65□□□□□ -0.7
ITGB1-209ENST00000472147 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
ITGB1-209ENST00000472147 MAGI1Q96QZ7 1491 aaPredicted RBP10.61□□□□□ -0.71
ITGB1-209ENST00000472147 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
ITGB1-209ENST00000472147 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
ITGB1-209ENST00000472147 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
ITGB1-209ENST00000472147 SNAPC4Q5SXM2 1469 aa10.59□□□□□ -0.71
ITGB1-209ENST00000472147 SYNJ2O15056 1496 aa10.58□□□□□ -0.72
ITGB1-209ENST00000472147 CHD1O14646 1710 aa10.58□□□□□ -0.72
ITGB1-209ENST00000472147 SYNJ1O43426 1573 aa10.57□□□□□ -0.72
ITGB1-209ENST00000472147 WDR97A6NE52 1622 aa10.57□□□□□ -0.72
ITGB1-209ENST00000472147 CLASP1Q7Z460 1538 aa10.57□□□□□ -0.72
ITGB1-209ENST00000472147 GAPVD1Q14C86 1478 aa10.56□□□□□ -0.72
ITGB1-209ENST00000472147 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
ITGB1-209ENST00000472147 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
ITGB1-209ENST00000472147 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
ITGB1-209ENST00000472147 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
ITGB1-209ENST00000472147 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
ITGB1-209ENST00000472147 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
ITGB1-209ENST00000472147 CUX1P39880 1505 aa10.48□□□□□ -0.73
ITGB1-209ENST00000472147 FAM69CQ0P6D2 419 aa10.46□□□□□ -0.73
ITGB1-209ENST00000472147 ABCA10Q8WWZ4 1543 aa10.46□□□□□ -0.74
ITGB1-209ENST00000472147 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
ITGB1-209ENST00000472147 NUP160Q12769 1436 aa10.43□□□□□ -0.74
ITGB1-209ENST00000472147 GRIN2AQ12879 1464 aa10.42□□□□□ -0.74
ITGB1-209ENST00000472147 FHAD1B1AJZ9 1412 aa10.42□□□□□ -0.74
ITGB1-209ENST00000472147 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
ITGB1-209ENST00000472147 CD44P16070 742 aaKnown RBP10.39□□□□□ -0.75
ITGB1-209ENST00000472147 PRG4Q92954 1404 aaPredicted RBP10.39□□□□□ -0.75
ITGB1-209ENST00000472147 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
ITGB1-209ENST00000472147 CLCN6P51797 869 aa10.37□□□□□ -0.75
ITGB1-209ENST00000472147 CEP170Q5SW79 1584 aa10.36□□□□□ -0.75
ITGB1-209ENST00000472147 ERCC6L2Q5T890 1561 aa10.36□□□□□ -0.75
ITGB1-209ENST00000472147 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
ITGB1-209ENST00000472147 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
ITGB1-209ENST00000472147 DCBLD2Q96PD2 775 aa10.35□□□□□ -0.75
ITGB1-209ENST00000472147 ABCC10Q5T3U5 1492 aa10.35□□□□□ -0.75
ITGB1-209ENST00000472147 ABCA5Q8WWZ7 1642 aa10.34□□□□□ -0.75
ITGB1-209ENST00000472147 SUPT5HO00267 1087 aaKnown RBP10.34□□□□□ -0.75
ITGB1-209ENST00000472147 POTEMA6NI47 508 aa10.32□□□□□ -0.76
ITGB1-209ENST00000472147 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
ITGB1-209ENST00000472147 ERICH3Q5RHP9 1530 aa10.32□□□□□ -0.76
ITGB1-209ENST00000472147 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
ITGB1-209ENST00000472147 SHROOM2Q13796 1616 aa10.3□□□□□ -0.76
ITGB1-209ENST00000472147 OTUD5Q96G74 571 aa10.29□□□□□ -0.76
ITGB1-209ENST00000472147 FARP1Q9Y4F1 1045 aaPredicted RBP10.27□□□□□ -0.77
ITGB1-209ENST00000472147 IGF1RP08069 1367 aa10.26□□□□□ -0.77
ITGB1-209ENST00000472147 ADAMTS12P58397 1594 aa10.26□□□□□ -0.77
ITGB1-209ENST00000472147 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
ITGB1-209ENST00000472147 IFNLR1Q8IU57 520 aaPredicted RBP10.26□□□□□ -0.77
ITGB1-209ENST00000472147 MAPKBP1O60336 1514 aa10.26□□□□□ -0.77
ITGB1-209ENST00000472147 PTPRGP23470 1445 aa10.25□□□□□ -0.77
ITGB1-209ENST00000472147 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
ITGB1-209ENST00000472147 KIAA0586Q9BVV6 1533 aa10.24□□□□□ -0.77
ITGB1-209ENST00000472147 MIER1Q8N108 512 aa10.24□□□□□ -0.77
ITGB1-209ENST00000472147 KIF13AQ9H1H9 1805 aa10.22□□□□□ -0.77
ITGB1-209ENST00000472147 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
ITGB1-209ENST00000472147 TNIKQ9UKE5 1360 aa10.19□□□□□ -0.78
ITGB1-209ENST00000472147 POTEB2H3BUK9 544 aa10.19□□□□□ -0.78
ITGB1-209ENST00000472147 CREBZFQ9NS37 354 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms