RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 KLHL34Q8N239 644 aa14.09□□□□□ -0.15
CLTC-204ENST00000472129 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
CLTC-204ENST00000472129 NUBP1P53384 320 aa14□□□□□ -0.17
CLTC-204ENST00000472129 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
CLTC-204ENST00000472129 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
CLTC-204ENST00000472129 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
CLTC-204ENST00000472129 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
CLTC-204ENST00000472129 POTEB2H3BUK9 544 aa13.96□□□□□ -0.17
CLTC-204ENST00000472129 CCDC61Q9Y6R9 512 aa13.95□□□□□ -0.18
CLTC-204ENST00000472129 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
CLTC-204ENST00000472129 ASTLQ6HA08 431 aaPredicted RBP13.91□□□□□ -0.18
CLTC-204ENST00000472129 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
CLTC-204ENST00000472129 ATMINO43313 823 aaPredicted RBP13.89□□□□□ -0.19
CLTC-204ENST00000472129 KIF12Q96FN5 646 aa13.86□□□□□ -0.19
CLTC-204ENST00000472129 DCAF8Q5TAQ9 597 aa13.84□□□□□ -0.19
CLTC-204ENST00000472129 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
CLTC-204ENST00000472129 METRNQ9UJH8 293 aa13.83□□□□□ -0.2
CLTC-204ENST00000472129 SLC39A7Q92504 469 aa13.8□□□□□ -0.2
CLTC-204ENST00000472129 MAP3K13O43283 966 aa13.78□□□□□ -0.2
CLTC-204ENST00000472129 C7P10643 843 aa13.78□□□□□ -0.2
CLTC-204ENST00000472129 ATN1P54259 1190 aaPredicted RBP13.78□□□□□ -0.2
CLTC-204ENST00000472129 CIZ1Q9ULV3 898 aaPredicted RBP13.78□□□□□ -0.2
CLTC-204ENST00000472129 TRPC6Q9Y210 931 aa13.78□□□□□ -0.2
CLTC-204ENST00000472129 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
CLTC-204ENST00000472129 GSE1Q14687 1217 aa13.75□□□□□ -0.21
CLTC-204ENST00000472129 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
CLTC-204ENST00000472129 PYGBP11216 843 aa13.71□□□□□ -0.21
CLTC-204ENST00000472129 TIE1P35590 1138 aa13.68□□□□□ -0.22
CLTC-204ENST00000472129 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
CLTC-204ENST00000472129 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
CLTC-204ENST00000472129 PKD2Q13563 968 aa13.62□□□□□ -0.23
CLTC-204ENST00000472129 PCDHB13Q9Y5F0 798 aa13.61□□□□□ -0.23
CLTC-204ENST00000472129 MAMSTRQ6ZN01 415 aa13.6□□□□□ -0.23
CLTC-204ENST00000472129 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
CLTC-204ENST00000472129 CHRM1P11229 460 aaPredicted RBP13.58□□□□□ -0.24
CLTC-204ENST00000472129 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
CLTC-204ENST00000472129 POTEMA6NI47 508 aa13.55□□□□□ -0.24
CLTC-204ENST00000472129 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
CLTC-204ENST00000472129 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
CLTC-204ENST00000472129 TRIM41Q8WV44 630 aa13.53□□□□□ -0.24
CLTC-204ENST00000472129 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
CLTC-204ENST00000472129 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
CLTC-204ENST00000472129 ECM2O94769 699 aaPredicted RBP13.52□□□□□ -0.25
CLTC-204ENST00000472129 PLSCR2Q9NRY7 297 aa13.52□□□□□ -0.25
CLTC-204ENST00000472129 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
CLTC-204ENST00000472129 SEC24BO95487 1268 aa13.49□□□□□ -0.25
CLTC-204ENST00000472129 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
CLTC-204ENST00000472129 IER5LQ5T953 404 aa13.47□□□□□ -0.25
CLTC-204ENST00000472129 LCE2DQ5TA82 110 aaPredicted RBP13.46□□□□□ -0.25
CLTC-204ENST00000472129 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
CLTC-204ENST00000472129 TMEM106CQ9BVX2 250 aa13.45□□□□□ -0.26
CLTC-204ENST00000472129 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
CLTC-204ENST00000472129 RGL2O15211 777 aa13.43□□□□□ -0.26
CLTC-204ENST00000472129 AMER1Q5JTC6 1135 aaPredicted RBP13.4□□□□□ -0.26
CLTC-204ENST00000472129 FAM163AQ96GL9 167 aaPredicted RBP13.4□□□□□ -0.26
CLTC-204ENST00000472129 RIOK3O14730 519 aaKnown RBP13.39□□□□□ -0.27
CLTC-204ENST00000472129 PSEN1P49768 467 aa13.35□□□□□ -0.27
CLTC-204ENST00000472129 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
CLTC-204ENST00000472129 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
CLTC-204ENST00000472129 PLCG2P16885 1265 aa13.31□□□□□ -0.28
CLTC-204ENST00000472129 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
CLTC-204ENST00000472129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.28□□□□□ -0.28
CLTC-204ENST00000472129 ZFP91Q96JP5 570 aaPredicted RBP13.28□□□□□ -0.28
CLTC-204ENST00000472129 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
CLTC-204ENST00000472129 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
CLTC-204ENST00000472129 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
CLTC-204ENST00000472129 CABP2Q9NPB3 220 aa13.2□□□□□ -0.3
CLTC-204ENST00000472129 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
CLTC-204ENST00000472129 DCAF8L2P0C7V8 631 aa13.19□□□□□ -0.3
CLTC-204ENST00000472129 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
CLTC-204ENST00000472129 STK25O00506 426 aa13.18□□□□□ -0.3
CLTC-204ENST00000472129 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
CLTC-204ENST00000472129 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
CLTC-204ENST00000472129 ST18O60284 1047 aa13.14□□□□□ -0.31
CLTC-204ENST00000472129 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
CLTC-204ENST00000472129 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
CLTC-204ENST00000472129 PDCD7Q8N8D1 485 aaKnown RBP13.13□□□□□ -0.31
CLTC-204ENST00000472129 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
CLTC-204ENST00000472129 HS6ST3Q8IZP7 471 aa13.09□□□□□ -0.31
CLTC-204ENST00000472129 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
CLTC-204ENST00000472129 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
CLTC-204ENST00000472129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.327e-11■■□□□ 11.4
CLTC-204ENST00000472129 SOX12O15370 315 aa13□□□□□ -0.33
CLTC-204ENST00000472129 ILDR1Q86SU0 546 aaPredicted RBP13□□□□□ -0.33
CLTC-204ENST00000472129 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
CLTC-204ENST00000472129 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
CLTC-204ENST00000472129 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
CLTC-204ENST00000472129 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
CLTC-204ENST00000472129 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
CLTC-204ENST00000472129 MFRPQ9BY79 579 aa12.98□□□□□ -0.33
CLTC-204ENST00000472129 SNPHO15079 494 aa12.97□□□□□ -0.33
CLTC-204ENST00000472129 TMEM121BQ9BXQ6 578 aaPredicted RBP12.96□□□□□ -0.33
CLTC-204ENST00000472129 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
CLTC-204ENST00000472129 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
CLTC-204ENST00000472129 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
CLTC-204ENST00000472129 NLRP6P59044 892 aa12.92□□□□□ -0.34
CLTC-204ENST00000472129 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
CLTC-204ENST00000472129 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
CLTC-204ENST00000472129 PPP1R37O75864 691 aa12.83□□□□□ -0.36
CLTC-204ENST00000472129 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms