RNA–Protein interactions for RNA: ENST00000471993.1

AC078828.1-201, humanhuman

TSL 3 BASIC

Gene AC078828.1, Length 458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078828.1-201ENST00000471993 METRNQ9UJH8 293 aa18.11■□□□□ 0.49
AC078828.1-201ENST00000471993 SLC39A7Q92504 469 aa18.08■□□□□ 0.48
AC078828.1-201ENST00000471993 C7P10643 843 aa18.06■□□□□ 0.48
AC078828.1-201ENST00000471993 POTEMA6NI47 508 aa18.04■□□□□ 0.48
AC078828.1-201ENST00000471993 CCDC61Q9Y6R9 512 aa18.04■□□□□ 0.48
AC078828.1-201ENST00000471993 POTEJP0CG39 1038 aa18.02■□□□□ 0.48
AC078828.1-201ENST00000471993 TSPYL2Q9H2G4 693 aaPredicted RBP18.01■□□□□ 0.47
AC078828.1-201ENST00000471993 POTEGQ6S5H5 508 aa17.97■□□□□ 0.47
AC078828.1-201ENST00000471993 ATN1P54259 1190 aaPredicted RBP17.93■□□□□ 0.46
AC078828.1-201ENST00000471993 KIF12Q96FN5 646 aa17.93■□□□□ 0.46
AC078828.1-201ENST00000471993 MAMSTRQ6ZN01 415 aa17.91■□□□□ 0.46
AC078828.1-201ENST00000471993 BMP2KQ9NSY1 1161 aaPredicted RBP17.84■□□□□ 0.45
AC078828.1-201ENST00000471993 TRPC6Q9Y210 931 aa17.82■□□□□ 0.44
AC078828.1-201ENST00000471993 POTEFA5A3E0 1075 aa17.8■□□□□ 0.44
AC078828.1-201ENST00000471993 MAP3K13O43283 966 aa17.79■□□□□ 0.44
AC078828.1-201ENST00000471993 LCE2DQ5TA82 110 aaPredicted RBP17.79■□□□□ 0.44
AC078828.1-201ENST00000471993 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
AC078828.1-201ENST00000471993 SCUBE2Q9NQ36 999 aa17.78■□□□□ 0.44
AC078828.1-201ENST00000471993 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
AC078828.1-201ENST00000471993 PLEKHG5O94827 1062 aa17.77■□□□□ 0.44
AC078828.1-201ENST00000471993 TIE1P35590 1138 aa17.77■□□□□ 0.44
AC078828.1-201ENST00000471993 MIER1Q8N108 512 aa17.75■□□□□ 0.43
AC078828.1-201ENST00000471993 TTLL13PA6NNM8 815 aa17.66■□□□□ 0.42
AC078828.1-201ENST00000471993 FAM163AQ96GL9 167 aaPredicted RBP17.64■□□□□ 0.41
AC078828.1-201ENST00000471993 COLQQ9Y215 455 aaPredicted RBP17.62■□□□□ 0.41
AC078828.1-201ENST00000471993 SGIP1Q9BQI5 828 aa17.6■□□□□ 0.41
AC078828.1-201ENST00000471993 SEC24BO95487 1268 aa17.55■□□□□ 0.4
AC078828.1-201ENST00000471993 IER5LQ5T953 404 aa17.55■□□□□ 0.4
AC078828.1-201ENST00000471993 PLCD3Q8N3E9 789 aa17.55■□□□□ 0.4
AC078828.1-201ENST00000471993 PCDHB13Q9Y5F0 798 aa17.54■□□□□ 0.4
AC078828.1-201ENST00000471993 NUBP1P53384 320 aa17.53■□□□□ 0.4
AC078828.1-201ENST00000471993 TRIM35Q9UPQ4 493 aa17.53■□□□□ 0.4
AC078828.1-201ENST00000471993 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
AC078828.1-201ENST00000471993 IFNL1Q8IU54 200 aa17.45■□□□□ 0.38
AC078828.1-201ENST00000471993 FAM212AQ96EL1 285 aa17.38■□□□□ 0.37
AC078828.1-201ENST00000471993 TMEM106CQ9BVX2 250 aa17.36■□□□□ 0.37
AC078828.1-201ENST00000471993 SLAIN1Q8ND83 568 aa17.31■□□□□ 0.36
AC078828.1-201ENST00000471993 IRX5P78411 483 aaPredicted RBP17.29■□□□□ 0.36
AC078828.1-201ENST00000471993 CDAN1Q8IWY9 1227 aa17.29■□□□□ 0.36
AC078828.1-201ENST00000471993 PLCG2P16885 1265 aa17.28■□□□□ 0.36
AC078828.1-201ENST00000471993 ST18O60284 1047 aa17.25■□□□□ 0.35
AC078828.1-201ENST00000471993 FKBP8Q14318 412 aa17.18■□□□□ 0.34
AC078828.1-201ENST00000471993 OCEL1Q9H607 264 aa17.16■□□□□ 0.34
AC078828.1-201ENST00000471993 PYGBP11216 843 aa17.14■□□□□ 0.33
AC078828.1-201ENST00000471993 DCAF8Q5TAQ9 597 aa17.12■□□□□ 0.33
AC078828.1-201ENST00000471993 TMEM121BQ9BXQ6 578 aaPredicted RBP17.07■□□□□ 0.32
AC078828.1-201ENST00000471993 PCDHB8Q9UN66 801 aa17.07■□□□□ 0.32
AC078828.1-201ENST00000471993 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.03■□□□□ 0.32
AC078828.1-201ENST00000471993 SNPHO15079 494 aa17■□□□□ 0.31
AC078828.1-201ENST00000471993 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
AC078828.1-201ENST00000471993 PDCD7Q8N8D1 485 aaKnown RBP16.97■□□□□ 0.31
AC078828.1-201ENST00000471993 ZNF467Q7Z7K2 595 aaPredicted RBP16.92■□□□□ 0.3
AC078828.1-201ENST00000471993 MMRN1Q13201 1228 aa16.9■□□□□ 0.3
AC078828.1-201ENST00000471993 SPNS2Q8IVW8 549 aa16.9■□□□□ 0.3
AC078828.1-201ENST00000471993 GSE1Q14687 1217 aa16.89■□□□□ 0.29
AC078828.1-201ENST00000471993 MARVELD3Q96A59 401 aa16.89■□□□□ 0.29
AC078828.1-201ENST00000471993 CHRM1P11229 460 aaPredicted RBP16.85■□□□□ 0.29
AC078828.1-201ENST00000471993 C3orf67Q6ZVT6 689 aa16.85■□□□□ 0.29
AC078828.1-201ENST00000471993 MKRN3Q13064 507 aaKnown RBP16.84■□□□□ 0.29
AC078828.1-201ENST00000471993 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
AC078828.1-201ENST00000471993 VASPP50552 380 aaPredicted RBP16.82■□□□□ 0.28
AC078828.1-201ENST00000471993 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
AC078828.1-201ENST00000471993 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
AC078828.1-201ENST00000471993 PSEN1P49768 467 aa16.77■□□□□ 0.28
AC078828.1-201ENST00000471993 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
AC078828.1-201ENST00000471993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.28
AC078828.1-201ENST00000471993 EMP3P54852 163 aa16.75■□□□□ 0.27
AC078828.1-201ENST00000471993 POTEB3A0JP26 581 aa16.67■□□□□ 0.26
AC078828.1-201ENST00000471993 POTEBQ6S5H4 581 aa16.67■□□□□ 0.26
AC078828.1-201ENST00000471993 PDAP1Q13442 181 aaKnown RBP16.66■□□□□ 0.26
AC078828.1-201ENST00000471993 HS3ST6Q96QI5 342 aa16.66■□□□□ 0.26
AC078828.1-201ENST00000471993 KRTAP3-3Q9BYR6 98 aa16.66■□□□□ 0.26
AC078828.1-201ENST00000471993 KRTAP3-2Q9BYR7 98 aa16.66■□□□□ 0.26
AC078828.1-201ENST00000471993 DPY19L2Q6NUT2 758 aa16.62■□□□□ 0.25
AC078828.1-201ENST00000471993 FAM205CA6NFA0 338 aa16.6■□□□□ 0.25
AC078828.1-201ENST00000471993 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
AC078828.1-201ENST00000471993 BOLA1Q9Y3E2 137 aa16.55■□□□□ 0.24
AC078828.1-201ENST00000471993 HOXB3P14651 431 aaPredicted RBP16.54■□□□□ 0.24
AC078828.1-201ENST00000471993 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
AC078828.1-201ENST00000471993 G3V3G9 751 aa16.49■□□□□ 0.23
AC078828.1-201ENST00000471993 IFNLR1Q8IU57 520 aaPredicted RBP16.48■□□□□ 0.23
AC078828.1-201ENST00000471993 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
AC078828.1-201ENST00000471993 HOXB1P14653 301 aaPredicted RBP16.44■□□□□ 0.22
AC078828.1-201ENST00000471993 DOK7Q18PE1 504 aa16.39■□□□□ 0.21
AC078828.1-201ENST00000471993 ZNF710Q8N1W2 664 aa16.38■□□□□ 0.21
AC078828.1-201ENST00000471993 EFCAB3Q8N7B9 438 aa16.32■□□□□ 0.2
AC078828.1-201ENST00000471993 ERBB3P21860 1342 aa16.31■□□□□ 0.2
AC078828.1-201ENST00000471993 RIMBP2O15034 1052 aa16.27■□□□□ 0.2
AC078828.1-201ENST00000471993 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
AC078828.1-201ENST00000471993 TMEM92Q6UXU6 159 aa16.24■□□□□ 0.19
AC078828.1-201ENST00000471993 MICALL2Q8IY33 904 aa16.24■□□□□ 0.19
AC078828.1-201ENST00000471993 VARS2Q5ST30 1063 aaKnown RBP16.23■□□□□ 0.19
AC078828.1-201ENST00000471993 ZSWIM6Q9HCJ5 1215 aa16.22■□□□□ 0.19
AC078828.1-201ENST00000471993 RNF166Q96A37 237 aaPredicted RBP16.2■□□□□ 0.18
AC078828.1-201ENST00000471993 GPR153Q6NV75 609 aa16.15■□□□□ 0.18
AC078828.1-201ENST00000471993 SOX12O15370 315 aa16.14■□□□□ 0.17
AC078828.1-201ENST00000471993 ZNF687Q8N1G0 1237 aa16.14■□□□□ 0.17
AC078828.1-201ENST00000471993 MS4A4AQ96JQ5 239 aa16.14■□□□□ 0.17
AC078828.1-201ENST00000471993 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
AC078828.1-201ENST00000471993 RNF25Q96BH1 459 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms