RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 PLCD3Q8N3E9 789 aa8.7□□□□□ -1.02
LRCH3-213ENST00000471667 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
LRCH3-213ENST00000471667 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
LRCH3-213ENST00000471667 CCDC180Q9P1Z9 1646 aa8.66□□□□□ -1.02
LRCH3-213ENST00000471667 RASEFQ8IZ41 740 aa8.66□□□□□ -1.02
LRCH3-213ENST00000471667 RB1CC1Q8TDY2 1594 aa8.64□□□□□ -1.03
LRCH3-213ENST00000471667 PELP1Q8IZL8 1130 aaKnown RBP8.63□□□□□ -1.03
LRCH3-213ENST00000471667 KIF12Q96FN5 646 aa8.63□□□□□ -1.03
LRCH3-213ENST00000471667 ZBTB47Q9UFB7 747 aaPredicted RBP8.62□□□□□ -1.03
LRCH3-213ENST00000471667 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-213ENST00000471667 ASTLQ6HA08 431 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-213ENST00000471667 MAP3K13O43283 966 aa8.58□□□□□ -1.04
LRCH3-213ENST00000471667 NUBP1P53384 320 aa8.58□□□□□ -1.04
LRCH3-213ENST00000471667 POTEB2H3BUK9 544 aa8.57□□□□□ -1.04
LRCH3-213ENST00000471667 METRNQ9UJH8 293 aa8.56□□□□□ -1.04
LRCH3-213ENST00000471667 FBXO3Q9UK99 471 aa8.56□□□□□ -1.04
LRCH3-213ENST00000471667 SLC39A7Q92504 469 aa8.55□□□□□ -1.04
LRCH3-213ENST00000471667 TRPC6Q9Y210 931 aa8.55□□□□□ -1.04
LRCH3-213ENST00000471667 C7P10643 843 aa8.54□□□□□ -1.04
LRCH3-213ENST00000471667 ATN1P54259 1190 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-213ENST00000471667 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-213ENST00000471667 OTUD5Q96G74 571 aa8.53□□□□□ -1.04
LRCH3-213ENST00000471667 CECR2Q9BXF3 1484 aa8.52□□□□□ -1.05
LRCH3-213ENST00000471667 FAM212AQ96EL1 285 aa8.52□□□□□ -1.05
LRCH3-213ENST00000471667 TIE1P35590 1138 aa8.51□□□□□ -1.05
LRCH3-213ENST00000471667 TRIM41Q8WV44 630 aa8.5□□□□□ -1.05
LRCH3-213ENST00000471667 SGIP1Q9BQI5 828 aa8.5□□□□□ -1.05
LRCH3-213ENST00000471667 PCDHB13Q9Y5F0 798 aa8.5□□□□□ -1.05
LRCH3-213ENST00000471667 TTLL13PA6NNM8 815 aa8.47□□□□□ -1.05
LRCH3-213ENST00000471667 VASPP50552 380 aaPredicted RBP8.47□□□□□ -1.05
LRCH3-213ENST00000471667 POTEJP0CG39 1038 aa8.46□□□□□ -1.06
LRCH3-213ENST00000471667 DCAF8Q5TAQ9 597 aa8.46□□□□□ -1.06
LRCH3-213ENST00000471667 IFNL1Q8IU54 200 aa8.45□□□□□ -1.06
LRCH3-213ENST00000471667 POTEFA5A3E0 1075 aa8.43□□□□□ -1.06
LRCH3-213ENST00000471667 KLHL34Q8N239 644 aa8.43□□□□□ -1.06
LRCH3-213ENST00000471667 MAMSTRQ6ZN01 415 aa8.42□□□□□ -1.06
LRCH3-213ENST00000471667 TRIM35Q9UPQ4 493 aa8.42□□□□□ -1.06
LRCH3-213ENST00000471667 PYGBP11216 843 aa8.41□□□□□ -1.06
LRCH3-213ENST00000471667 NACADO15069 1562 aa8.4□□□□□ -1.06
LRCH3-213ENST00000471667 TMEM106CQ9BVX2 250 aa8.4□□□□□ -1.06
LRCH3-213ENST00000471667 SEC24BO95487 1268 aa8.39□□□□□ -1.07
LRCH3-213ENST00000471667 COLQQ9Y215 455 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-213ENST00000471667 CUX2O14529 1486 aa8.38□□□□□ -1.07
LRCH3-213ENST00000471667 IER5LQ5T953 404 aa8.38□□□□□ -1.07
LRCH3-213ENST00000471667 SCUBE2Q9NQ36 999 aa8.38□□□□□ -1.07
LRCH3-213ENST00000471667 CC2D2AQ9P2K1 1620 aa8.36□□□□□ -1.07
LRCH3-213ENST00000471667 GSE1Q14687 1217 aa8.35□□□□□ -1.07
LRCH3-213ENST00000471667 PCDHB8Q9UN66 801 aa8.35□□□□□ -1.07
LRCH3-213ENST00000471667 DCAF8L2P0C7V8 631 aa8.31□□□□□ -1.08
LRCH3-213ENST00000471667 IFNLR1Q8IU57 520 aaPredicted RBP8.31□□□□□ -1.08
LRCH3-213ENST00000471667 PLCG2P16885 1265 aa8.3□□□□□ -1.08
LRCH3-213ENST00000471667 POTEMA6NI47 508 aa8.29□□□□□ -1.08
LRCH3-213ENST00000471667 ZNF467Q7Z7K2 595 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-213ENST00000471667 SPOCK2Q92563 424 aa8.29□□□□□ -1.08
LRCH3-213ENST00000471667 CHRM1P11229 460 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-213ENST00000471667 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-213ENST00000471667 POTEGQ6S5H5 508 aa8.27□□□□□ -1.09
LRCH3-213ENST00000471667 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
LRCH3-213ENST00000471667 FAM163AQ96GL9 167 aaPredicted RBP8.26□□□□□ -1.09
LRCH3-213ENST00000471667 OCEL1Q9H607 264 aa8.26□□□□□ -1.09
LRCH3-213ENST00000471667 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
LRCH3-213ENST00000471667 BICRAQ9NZM4 1560 aa8.24□□□□□ -1.09
LRCH3-213ENST00000471667 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
LRCH3-213ENST00000471667 ERCC6Q03468 1493 aa8.23□□□□□ -1.09
LRCH3-213ENST00000471667 PSEN1P49768 467 aa8.22□□□□□ -1.09
LRCH3-213ENST00000471667 UNC13AQ9UPW8 1703 aa8.22□□□□□ -1.09
LRCH3-213ENST00000471667 GOLGA2Q08379 1002 aa8.21□□□□□ -1.1
LRCH3-213ENST00000471667 SLAIN1Q8ND83 568 aa8.21□□□□□ -1.1
LRCH3-213ENST00000471667 PLSCR2Q9NRY7 297 aa8.21□□□□□ -1.1
LRCH3-213ENST00000471667 EIF4G1Q04637 1599 aaKnown RBP8.2□□□□□ -1.1
LRCH3-213ENST00000471667 MKRN3Q13064 507 aaKnown RBP8.19□□□□□ -1.1
LRCH3-213ENST00000471667 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
LRCH3-213ENST00000471667 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
LRCH3-213ENST00000471667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.15□□□□□ -1.1
LRCH3-213ENST00000471667 PCDH10Q9P2E7 1040 aa8.15□□□□□ -1.1
LRCH3-213ENST00000471667 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
LRCH3-213ENST00000471667 CABP2Q9NPB3 220 aa8.12□□□□□ -1.11
LRCH3-213ENST00000471667 L3MBTL3Q96JM7 780 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-213ENST00000471667 ST18O60284 1047 aa8.1□□□□□ -1.11
LRCH3-213ENST00000471667 C3orf67Q6ZVT6 689 aa8.1□□□□□ -1.11
LRCH3-213ENST00000471667 ILDR1Q86SU0 546 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-213ENST00000471667 SNPHO15079 494 aa8.06□□□□□ -1.12
LRCH3-213ENST00000471667 DPY19L2Q6NUT2 758 aa8.06□□□□□ -1.12
LRCH3-213ENST00000471667 MYO15BQ96JP2 1530 aa8.05□□□□□ -1.12
LRCH3-213ENST00000471667 RIOK3O14730 519 aaKnown RBP8.03□□□□□ -1.12
LRCH3-213ENST00000471667 CDAN1Q8IWY9 1227 aa8.03□□□□□ -1.12
LRCH3-213ENST00000471667 RNF25Q96BH1 459 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-213ENST00000471667 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
LRCH3-213ENST00000471667 EFCAB3Q8N7B9 438 aa8.02□□□□□ -1.13
LRCH3-213ENST00000471667 BOLA1Q9Y3E2 137 aa8.02□□□□□ -1.13
LRCH3-213ENST00000471667 G3V3G9 751 aa8.01□□□□□ -1.13
LRCH3-213ENST00000471667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-213ENST00000471667 VGFO15240 615 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-213ENST00000471667 ZFP91Q96JP5 570 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-213ENST00000471667 MARVELD3Q96A59 401 aa7.98□□□□□ -1.13
LRCH3-213ENST00000471667 SOX12O15370 315 aa7.94□□□□□ -1.14
LRCH3-213ENST00000471667 EMP3P54852 163 aa7.93□□□□□ -1.14
LRCH3-213ENST00000471667 MICALL2Q8IY33 904 aa7.91□□□□□ -1.14
LRCH3-213ENST00000471667 MS4A4AQ96JQ5 239 aa7.91□□□□□ -1.14
LRCH3-213ENST00000471667 TAOK2Q9UL54 1235 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms