RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-206ENST00000471167 SPOCK2Q92563 424 aa15.83■□□□□ 0.12
PRPF40A-206ENST00000471167 GALR2O43603 387 aaPredicted RBP15.78■□□□□ 0.12
PRPF40A-206ENST00000471167 KIF12Q96FN5 646 aa15.78■□□□□ 0.12
PRPF40A-206ENST00000471167 FAM212AQ96EL1 285 aa15.76■□□□□ 0.11
PRPF40A-206ENST00000471167 DCAF8Q5TAQ9 597 aa15.75■□□□□ 0.11
PRPF40A-206ENST00000471167 MAP3K13O43283 966 aa15.71■□□□□ 0.11
PRPF40A-206ENST00000471167 POTEIP0CG38 1075 aa15.71■□□□□ 0.11
PRPF40A-206ENST00000471167 MS4A3Q96HJ5 214 aa15.71■□□□□ 0.11
PRPF40A-206ENST00000471167 CLCN6P51797 869 aa15.67■□□□□ 0.1
PRPF40A-206ENST00000471167 PYGBP11216 843 aa15.65■□□□□ 0.1
PRPF40A-206ENST00000471167 TRPC6Q9Y210 931 aa15.65■□□□□ 0.1
PRPF40A-206ENST00000471167 GSE1Q14687 1217 aa15.63■□□□□ 0.09
PRPF40A-206ENST00000471167 CIZ1Q9ULV3 898 aaPredicted RBP15.6■□□□□ 0.09
PRPF40A-206ENST00000471167 IFNL1Q8IU54 200 aa15.58■□□□□ 0.08
PRPF40A-206ENST00000471167 CHRM1P11229 460 aaPredicted RBP15.57■□□□□ 0.08
PRPF40A-206ENST00000471167 PCDHB13Q9Y5F0 798 aa15.55■□□□□ 0.08
PRPF40A-206ENST00000471167 SGIP1Q9BQI5 828 aa15.54■□□□□ 0.08
PRPF40A-206ENST00000471167 PELP1Q8IZL8 1130 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-206ENST00000471167 PCDHB8Q9UN66 801 aa15.51■□□□□ 0.07
PRPF40A-206ENST00000471167 PKD2Q13563 968 aa15.5■□□□□ 0.07
PRPF40A-206ENST00000471167 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
PRPF40A-206ENST00000471167 ATMINO43313 823 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-206ENST00000471167 DCBLD2Q96PD2 775 aa15.46■□□□□ 0.07
PRPF40A-206ENST00000471167 ASTLQ6HA08 431 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-206ENST00000471167 RNF25Q96BH1 459 aaPredicted RBP15.44■□□□□ 0.06
PRPF40A-206ENST00000471167 ATN1P54259 1190 aaPredicted RBP15.42■□□□□ 0.06
PRPF40A-206ENST00000471167 TTLL13PA6NNM8 815 aa15.39■□□□□ 0.05
PRPF40A-206ENST00000471167 TIE1P35590 1138 aa15.39■□□□□ 0.05
PRPF40A-206ENST00000471167 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
PRPF40A-206ENST00000471167 ZNF467Q7Z7K2 595 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-206ENST00000471167 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
PRPF40A-206ENST00000471167 ECM2O94769 699 aaPredicted RBP15.28■□□□□ 0.04
PRPF40A-206ENST00000471167 RGL2O15211 777 aa15.27■□□□□ 0.04
PRPF40A-206ENST00000471167 POTEFA5A3E0 1075 aa15.26■□□□□ 0.03
PRPF40A-206ENST00000471167 PSEN1P49768 467 aa15.26■□□□□ 0.03
PRPF40A-206ENST00000471167 TRIM35Q9UPQ4 493 aa15.26■□□□□ 0.03
PRPF40A-206ENST00000471167 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-206ENST00000471167 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
PRPF40A-206ENST00000471167 PDAP1Q13442 181 aaKnown RBP15.22■□□□□ 0.03
PRPF40A-206ENST00000471167 METRNQ9UJH8 293 aa15.18■□□□□ 0.02
PRPF40A-206ENST00000471167 SLC39A7Q92504 469 aa15.17■□□□□ 0.02
PRPF40A-206ENST00000471167 COLQQ9Y215 455 aaPredicted RBP15.17■□□□□ 0.02
PRPF40A-206ENST00000471167 C7P10643 843 aa15.16■□□□□ 0.02
PRPF40A-206ENST00000471167 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.15■□□□□ 0.02
PRPF40A-206ENST00000471167 ZFP91Q96JP5 570 aaPredicted RBP15.15■□□□□ 0.02
PRPF40A-206ENST00000471167 POTEJP0CG39 1038 aa15.14■□□□□ 0.01
PRPF40A-206ENST00000471167 VGFO15240 615 aaPredicted RBP15.11■□□□□ 0.01
PRPF40A-206ENST00000471167 IRX5P78411 483 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-206ENST00000471167 LHX8Q68G74 356 aa15.1■□□□□ 0.01
PRPF40A-206ENST00000471167 IER5LQ5T953 404 aa15.09■□□□□ 0.01
PRPF40A-206ENST00000471167 RTN4Q9NQC3 1192 aaKnown RBP15.08■□□□□ 0
PRPF40A-206ENST00000471167 CABP2Q9NPB3 220 aa15.07■□□□□ 0
PRPF40A-206ENST00000471167 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
PRPF40A-206ENST00000471167 EFCAB3Q8N7B9 438 aa15.01□□□□□ -0.01
PRPF40A-206ENST00000471167 PDCD7Q8N8D1 485 aaKnown RBP15.01□□□□□ -0.01
PRPF40A-206ENST00000471167 BCL11BQ9C0K0 894 aaPredicted RBP15.01□□□□□ -0.01
PRPF40A-206ENST00000471167 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
PRPF40A-206ENST00000471167 SEC24BO95487 1268 aa14.95□□□□□ -0.02
PRPF40A-206ENST00000471167 MKRN3Q13064 507 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-206ENST00000471167 OTUD5Q96G74 571 aa14.95□□□□□ -0.02
PRPF40A-206ENST00000471167 STK25O00506 426 aa14.94□□□□□ -0.02
PRPF40A-206ENST00000471167 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
PRPF40A-206ENST00000471167 DPY19L2Q6NUT2 758 aa14.93□□□□□ -0.02
PRPF40A-206ENST00000471167 STK24Q9Y6E0 443 aa14.93□□□□□ -0.02
PRPF40A-206ENST00000471167 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
PRPF40A-206ENST00000471167 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.91□□□□□ -0.022e-9■■■■■ 29.1
PRPF40A-206ENST00000471167 PLCG2P16885 1265 aa14.9□□□□□ -0.02
PRPF40A-206ENST00000471167 MS4A4AQ96JQ5 239 aa14.89□□□□□ -0.03
PRPF40A-206ENST00000471167 TAOK2Q9UL54 1235 aa14.89□□□□□ -0.03
PRPF40A-206ENST00000471167 HS6ST3Q8IZP7 471 aa14.87□□□□□ -0.03
PRPF40A-206ENST00000471167 PHF8Q9UPP1 1060 aa14.87□□□□□ -0.03
PRPF40A-206ENST00000471167 FBXO22Q8NEZ5 403 aa14.85□□□□□ -0.03
PRPF40A-206ENST00000471167 MFRPQ9BY79 579 aa14.85□□□□□ -0.03
PRPF40A-206ENST00000471167 CHGAP10645 457 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-206ENST00000471167 SOX12O15370 315 aa14.83□□□□□ -0.04
PRPF40A-206ENST00000471167 NKX1-1Q15270 411 aaPredicted RBP14.81□□□□□ -0.04
PRPF40A-206ENST00000471167 DNAJC5Q9H3Z4 198 aa14.78□□□□□ -0.04
PRPF40A-206ENST00000471167 NLRP6P59044 892 aa14.71□□□□□ -0.05
PRPF40A-206ENST00000471167 TMEM121BQ9BXQ6 578 aaPredicted RBP14.71□□□□□ -0.05
PRPF40A-206ENST00000471167 PPP1R37O75864 691 aa14.69□□□□□ -0.06
PRPF40A-206ENST00000471167 MAMSTRQ6ZN01 415 aa14.69□□□□□ -0.06
PRPF40A-206ENST00000471167 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
PRPF40A-206ENST00000471167 L3MBTL3Q96JM7 780 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-206ENST00000471167 BOLA1Q9Y3E2 137 aa14.67□□□□□ -0.06
PRPF40A-206ENST00000471167 SCUBE2Q9NQ36 999 aa14.66□□□□□ -0.06
PRPF40A-206ENST00000471167 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
PRPF40A-206ENST00000471167 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
PRPF40A-206ENST00000471167 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
PRPF40A-206ENST00000471167 SLAIN1Q8ND83 568 aa14.58□□□□□ -0.08
PRPF40A-206ENST00000471167 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.55□□□□□ -0.08
PRPF40A-206ENST00000471167 LCE2DQ5TA82 110 aaPredicted RBP14.52□□□□□ -0.09
PRPF40A-206ENST00000471167 C3orf67Q6ZVT6 689 aa14.52□□□□□ -0.09
PRPF40A-206ENST00000471167 BBXQ8WY36 941 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-206ENST00000471167 G3V3G9 751 aa14.45□□□□□ -0.1
PRPF40A-206ENST00000471167 KIF3CO14782 793 aa14.42□□□□□ -0.1
PRPF40A-206ENST00000471167 HOXB3P14651 431 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-206ENST00000471167 C2orf72A6NCS6 295 aa14.36□□□□□ -0.11
PRPF40A-206ENST00000471167 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
PRPF40A-206ENST00000471167 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms