RNA–Protein interactions for RNA: ENST00000470386.5

GTF3C3-210, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-210ENST00000470386 SLC39A7Q92504 469 aa9.74□□□□□ -0.85
GTF3C3-210ENST00000470386 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
GTF3C3-210ENST00000470386 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
GTF3C3-210ENST00000470386 ATMINO43313 823 aaPredicted RBP9.72□□□□□ -0.85
GTF3C3-210ENST00000470386 C7P10643 843 aa9.72□□□□□ -0.85
GTF3C3-210ENST00000470386 MIER1Q8N108 512 aa9.72□□□□□ -0.85
GTF3C3-210ENST00000470386 CCDC61Q9Y6R9 512 aa9.7□□□□□ -0.86
GTF3C3-210ENST00000470386 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
GTF3C3-210ENST00000470386 KIF12Q96FN5 646 aa9.65□□□□□ -0.86
GTF3C3-210ENST00000470386 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
GTF3C3-210ENST00000470386 POTEMA6NI47 508 aa9.63□□□□□ -0.87
GTF3C3-210ENST00000470386 ATN1P54259 1190 aaPredicted RBP9.63□□□□□ -0.87
GTF3C3-210ENST00000470386 SCUBE2Q9NQ36 999 aa9.62□□□□□ -0.87
GTF3C3-210ENST00000470386 MAP3K13O43283 966 aa9.6□□□□□ -0.87
GTF3C3-210ENST00000470386 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
GTF3C3-210ENST00000470386 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
GTF3C3-210ENST00000470386 TIE1P35590 1138 aa9.59□□□□□ -0.87
GTF3C3-210ENST00000470386 POTEGQ6S5H5 508 aa9.59□□□□□ -0.87
GTF3C3-210ENST00000470386 BMP2KQ9NSY1 1161 aaPredicted RBP9.59□□□□□ -0.87
GTF3C3-210ENST00000470386 POTEJP0CG39 1038 aa9.55□□□□□ -0.88
GTF3C3-210ENST00000470386 TRPC6Q9Y210 931 aa9.55□□□□□ -0.88
GTF3C3-210ENST00000470386 SEC24BO95487 1268 aa9.54□□□□□ -0.88
GTF3C3-210ENST00000470386 SGIP1Q9BQI5 828 aa9.52□□□□□ -0.89
GTF3C3-210ENST00000470386 PCDHB13Q9Y5F0 798 aa9.52□□□□□ -0.89
GTF3C3-210ENST00000470386 TTLL13PA6NNM8 815 aa9.51□□□□□ -0.89
GTF3C3-210ENST00000470386 FAM212AQ96EL1 285 aa9.5□□□□□ -0.89
GTF3C3-210ENST00000470386 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
GTF3C3-210ENST00000470386 PCDH10Q9P2E7 1040 aa9.5□□□□□ -0.89
GTF3C3-210ENST00000470386 POTEFA5A3E0 1075 aa9.48□□□□□ -0.89
GTF3C3-210ENST00000470386 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
GTF3C3-210ENST00000470386 NUBP1P53384 320 aa9.47□□□□□ -0.89
GTF3C3-210ENST00000470386 FKBP8Q14318 412 aa9.47□□□□□ -0.89
GTF3C3-210ENST00000470386 IER5LQ5T953 404 aa9.46□□□□□ -0.9
GTF3C3-210ENST00000470386 COLQQ9Y215 455 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-210ENST00000470386 IFNL1Q8IU54 200 aa9.42□□□□□ -0.9
GTF3C3-210ENST00000470386 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
GTF3C3-210ENST00000470386 PLCG2P16885 1265 aa9.39□□□□□ -0.91
GTF3C3-210ENST00000470386 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
GTF3C3-210ENST00000470386 DCAF8Q5TAQ9 597 aa9.38□□□□□ -0.91
GTF3C3-210ENST00000470386 FBXO3Q9UK99 471 aa9.37□□□□□ -0.91
GTF3C3-210ENST00000470386 SLAIN1Q8ND83 568 aa9.35□□□□□ -0.91
GTF3C3-210ENST00000470386 PYGBP11216 843 aa9.33□□□□□ -0.92
GTF3C3-210ENST00000470386 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
GTF3C3-210ENST00000470386 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
GTF3C3-210ENST00000470386 OCEL1Q9H607 264 aa9.28□□□□□ -0.92
GTF3C3-210ENST00000470386 CDAN1Q8IWY9 1227 aa9.27□□□□□ -0.93
GTF3C3-210ENST00000470386 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
GTF3C3-210ENST00000470386 GSE1Q14687 1217 aa9.25□□□□□ -0.93
GTF3C3-210ENST00000470386 ST18O60284 1047 aa9.24□□□□□ -0.93
GTF3C3-210ENST00000470386 GOLGA2Q08379 1002 aa9.24□□□□□ -0.93
GTF3C3-210ENST00000470386 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.24□□□□□ -0.93
GTF3C3-210ENST00000470386 ZNF467Q7Z7K2 595 aaPredicted RBP9.23□□□□□ -0.93
GTF3C3-210ENST00000470386 SNPHO15079 494 aa9.22□□□□□ -0.93
GTF3C3-210ENST00000470386 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
GTF3C3-210ENST00000470386 MKRN3Q13064 507 aaKnown RBP9.2□□□□□ -0.94
GTF3C3-210ENST00000470386 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
GTF3C3-210ENST00000470386 C3orf67Q6ZVT6 689 aa9.17□□□□□ -0.94
GTF3C3-210ENST00000470386 L3MBTL3Q96JM7 780 aaPredicted RBP9.15□□□□□ -0.94
GTF3C3-210ENST00000470386 NISCHQ9Y2I1 1504 aa9.15□□□□□ -0.95
GTF3C3-210ENST00000470386 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
GTF3C3-210ENST00000470386 PSEN1P49768 467 aa9.12□□□□□ -0.95
GTF3C3-210ENST00000470386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.12□□□□□ -0.953e-7■■■□□ 15
GTF3C3-210ENST00000470386 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
GTF3C3-210ENST00000470386 MARVELD3Q96A59 401 aa9.09□□□□□ -0.95
GTF3C3-210ENST00000470386 PDAP1Q13442 181 aaKnown RBP9.08□□□□□ -0.96
GTF3C3-210ENST00000470386 G3V3G9 751 aa9.07□□□□□ -0.96
GTF3C3-210ENST00000470386 CIZ1Q9ULV3 898 aaPredicted RBP9.07□□□□□ -0.96
GTF3C3-210ENST00000470386 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
GTF3C3-210ENST00000470386 EMP3P54852 163 aa9.04□□□□□ -0.96
GTF3C3-210ENST00000470386 MMRN1Q13201 1228 aa9.02□□□□□ -0.97
GTF3C3-210ENST00000470386 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
GTF3C3-210ENST00000470386 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
GTF3C3-210ENST00000470386 IFNLR1Q8IU57 520 aaPredicted RBP8.99□□□□□ -0.97
GTF3C3-210ENST00000470386 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
GTF3C3-210ENST00000470386 FAM205CA6NFA0 338 aa8.97□□□□□ -0.97
GTF3C3-210ENST00000470386 DPY19L2Q6NUT2 758 aa8.96□□□□□ -0.98
GTF3C3-210ENST00000470386 ILDR1Q86SU0 546 aaPredicted RBP8.96□□□□□ -0.98
GTF3C3-210ENST00000470386 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.98
GTF3C3-210ENST00000470386 ZNF710Q8N1W2 664 aa8.93□□□□□ -0.98
GTF3C3-210ENST00000470386 TRIM41Q8WV44 630 aa8.93□□□□□ -0.98
GTF3C3-210ENST00000470386 DOK7Q18PE1 504 aa8.89□□□□□ -0.99
GTF3C3-210ENST00000470386 RIMBP2O15034 1052 aa8.88□□□□□ -0.99
GTF3C3-210ENST00000470386 KRTAP3-3Q9BYR6 98 aa8.88□□□□□ -0.99
GTF3C3-210ENST00000470386 KRTAP3-2Q9BYR7 98 aa8.88□□□□□ -0.99
GTF3C3-210ENST00000470386 POTEB3A0JP26 581 aa8.87□□□□□ -0.99
GTF3C3-210ENST00000470386 POTEBQ6S5H4 581 aa8.87□□□□□ -0.99
GTF3C3-210ENST00000470386 EFCAB3Q8N7B9 438 aa8.87□□□□□ -0.99
GTF3C3-210ENST00000470386 HOXB3P14651 431 aaPredicted RBP8.86□□□□□ -0.99
GTF3C3-210ENST00000470386 ERBB3P21860 1342 aa8.85□□□□□ -0.99
GTF3C3-210ENST00000470386 HOXB1P14653 301 aaPredicted RBP8.85□□□□□ -0.99
GTF3C3-210ENST00000470386 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
GTF3C3-210ENST00000470386 MICALL2Q8IY33 904 aa8.8□□□□□ -1
GTF3C3-210ENST00000470386 SOX12O15370 315 aa8.79□□□□□ -1
GTF3C3-210ENST00000470386 VGFO15240 615 aaPredicted RBP8.77□□□□□ -1.01
GTF3C3-210ENST00000470386 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
GTF3C3-210ENST00000470386 ZSWIM6Q9HCJ5 1215 aa8.77□□□□□ -1.01
GTF3C3-210ENST00000470386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.76□□□□□ -1.01
GTF3C3-210ENST00000470386 ZFP91Q96JP5 570 aaPredicted RBP8.76□□□□□ -1.01
GTF3C3-210ENST00000470386 TAOK2Q9UL54 1235 aa8.73□□□□□ -1.01
GTF3C3-210ENST00000470386 PHF8Q9UPP1 1060 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms