RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 MS4A3Q96HJ5 214 aa10.43□□□□□ -0.74
TPR-204ENST00000469463 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.74
TPR-204ENST00000469463 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
TPR-204ENST00000469463 KIF12Q96FN5 646 aa10.38□□□□□ -0.75
TPR-204ENST00000469463 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
TPR-204ENST00000469463 ATMINO43313 823 aaPredicted RBP10.35□□□□□ -0.75
TPR-204ENST00000469463 SLC39A7Q92504 469 aa10.35□□□□□ -0.75
TPR-204ENST00000469463 C7P10643 843 aa10.33□□□□□ -0.76
TPR-204ENST00000469463 NUBP1P53384 320 aa10.31□□□□□ -0.76
TPR-204ENST00000469463 PELP1Q8IZL8 1130 aaKnown RBP10.31□□□□□ -0.76
TPR-204ENST00000469463 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
TPR-204ENST00000469463 SGIP1Q9BQI5 828 aa10.31□□□□□ -0.76
TPR-204ENST00000469463 METRNQ9UJH8 293 aa10.31□□□□□ -0.76
TPR-204ENST00000469463 MAP3K13O43283 966 aa10.3□□□□□ -0.76
TPR-204ENST00000469463 TIE1P35590 1138 aa10.29□□□□□ -0.76
TPR-204ENST00000469463 ATN1P54259 1190 aaPredicted RBP10.26□□□□□ -0.77
TPR-204ENST00000469463 BMP2KQ9NSY1 1161 aaPredicted RBP10.26□□□□□ -0.77
TPR-204ENST00000469463 POTEB2H3BUK9 544 aa10.24□□□□□ -0.77
TPR-204ENST00000469463 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
TPR-204ENST00000469463 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
TPR-204ENST00000469463 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
TPR-204ENST00000469463 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
TPR-204ENST00000469463 TTLL13PA6NNM8 815 aa10.19□□□□□ -0.78
TPR-204ENST00000469463 VASPP50552 380 aaPredicted RBP10.18□□□□□ -0.78
TPR-204ENST00000469463 IER5LQ5T953 404 aa10.16□□□□□ -0.78
TPR-204ENST00000469463 DCAF8Q5TAQ9 597 aa10.16□□□□□ -0.78
TPR-204ENST00000469463 IFNL1Q8IU54 200 aa10.15□□□□□ -0.78
TPR-204ENST00000469463 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
TPR-204ENST00000469463 KLHL34Q8N239 644 aa10.13□□□□□ -0.79
TPR-204ENST00000469463 TRIM35Q9UPQ4 493 aa10.13□□□□□ -0.79
TPR-204ENST00000469463 SEC24BO95487 1268 aa10.12□□□□□ -0.79
TPR-204ENST00000469463 GSE1Q14687 1217 aa10.12□□□□□ -0.79
TPR-204ENST00000469463 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
TPR-204ENST00000469463 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
TPR-204ENST00000469463 POTEFA5A3E0 1075 aa10.09□□□□□ -0.79
TPR-204ENST00000469463 PYGBP11216 843 aa10.08□□□□□ -0.8
TPR-204ENST00000469463 ZNF467Q7Z7K2 595 aaPredicted RBP10.04□□□□□ -0.8
TPR-204ENST00000469463 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
TPR-204ENST00000469463 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
TPR-204ENST00000469463 PLCG2P16885 1265 aa10.01□□□□□ -0.81
TPR-204ENST00000469463 SPOCK2Q92563 424 aa9.99□□□□□ -0.81
TPR-204ENST00000469463 PCDHB8Q9UN66 801 aa9.99□□□□□ -0.81
TPR-204ENST00000469463 POTEMA6NI47 508 aa9.98□□□□□ -0.81
TPR-204ENST00000469463 IRX5P78411 483 aaPredicted RBP9.98□□□□□ -0.81
TPR-204ENST00000469463 POTEGQ6S5H5 508 aa9.96□□□□□ -0.82
TPR-204ENST00000469463 PLSCR2Q9NRY7 297 aa9.96□□□□□ -0.82
TPR-204ENST00000469463 IFNLR1Q8IU57 520 aaPredicted RBP9.95□□□□□ -0.82
TPR-204ENST00000469463 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
TPR-204ENST00000469463 GOLGA2Q08379 1002 aa9.93□□□□□ -0.82
TPR-204ENST00000469463 PCDH10Q9P2E7 1040 aa9.93□□□□□ -0.82
TPR-204ENST00000469463 FAM163AQ96GL9 167 aaPredicted RBP9.9□□□□□ -0.82
TPR-204ENST00000469463 CIZ1Q9ULV3 898 aaPredicted RBP9.9□□□□□ -0.82
TPR-204ENST00000469463 MKRN3Q13064 507 aaKnown RBP9.89□□□□□ -0.83
TPR-204ENST00000469463 PSEN1P49768 467 aa9.88□□□□□ -0.83
TPR-204ENST00000469463 SLAIN1Q8ND83 568 aa9.88□□□□□ -0.83
TPR-204ENST00000469463 PDAP1Q13442 181 aaKnown RBP9.87□□□□□ -0.83
TPR-204ENST00000469463 TRIM41Q8WV44 630 aa9.87□□□□□ -0.83
TPR-204ENST00000469463 LCE2DQ5TA82 110 aaPredicted RBP9.86□□□□□ -0.83
TPR-204ENST00000469463 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.83□□□□□ -0.84
TPR-204ENST00000469463 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
TPR-204ENST00000469463 L3MBTL3Q96JM7 780 aaPredicted RBP9.82□□□□□ -0.84
TPR-204ENST00000469463 SNPHO15079 494 aa9.8□□□□□ -0.84
TPR-204ENST00000469463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.8□□□□□ -0.842e-13■■■□□ 17.2
TPR-204ENST00000469463 C3orf67Q6ZVT6 689 aa9.78□□□□□ -0.84
TPR-204ENST00000469463 ILDR1Q86SU0 546 aaPredicted RBP9.77□□□□□ -0.85
TPR-204ENST00000469463 CABP2Q9NPB3 220 aa9.76□□□□□ -0.85
TPR-204ENST00000469463 TMEM121BQ9BXQ6 578 aaPredicted RBP9.75□□□□□ -0.85
TPR-204ENST00000469463 ST18O60284 1047 aa9.74□□□□□ -0.85
TPR-204ENST00000469463 G3V3G9 751 aa9.72□□□□□ -0.85
TPR-204ENST00000469463 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
TPR-204ENST00000469463 CDAN1Q8IWY9 1227 aa9.67□□□□□ -0.86
TPR-204ENST00000469463 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
TPR-204ENST00000469463 VGFO15240 615 aaPredicted RBP9.64□□□□□ -0.87
TPR-204ENST00000469463 DPY19L2Q6NUT2 758 aa9.63□□□□□ -0.87
TPR-204ENST00000469463 EFCAB3Q8N7B9 438 aa9.63□□□□□ -0.87
TPR-204ENST00000469463 TAOK2Q9UL54 1235 aa9.63□□□□□ -0.87
TPR-204ENST00000469463 SOX12O15370 315 aa9.61□□□□□ -0.87
TPR-204ENST00000469463 RNF25Q96BH1 459 aaPredicted RBP9.6□□□□□ -0.87
TPR-204ENST00000469463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.58□□□□□ -0.88
TPR-204ENST00000469463 ZFP91Q96JP5 570 aaPredicted RBP9.58□□□□□ -0.88
TPR-204ENST00000469463 EMP3P54852 163 aa9.56□□□□□ -0.88
TPR-204ENST00000469463 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
TPR-204ENST00000469463 DOK7Q18PE1 504 aa9.52□□□□□ -0.89
TPR-204ENST00000469463 MICALL2Q8IY33 904 aa9.52□□□□□ -0.89
TPR-204ENST00000469463 ZNF710Q8N1W2 664 aa9.51□□□□□ -0.89
TPR-204ENST00000469463 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
TPR-204ENST00000469463 HOXB3P14651 431 aaPredicted RBP9.49□□□□□ -0.89
TPR-204ENST00000469463 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
TPR-204ENST00000469463 PHF8Q9UPP1 1060 aa9.49□□□□□ -0.89
TPR-204ENST00000469463 ECM2O94769 699 aaPredicted RBP9.48□□□□□ -0.89
TPR-204ENST00000469463 NLRP6P59044 892 aa9.48□□□□□ -0.89
TPR-204ENST00000469463 MS4A4AQ96JQ5 239 aa9.47□□□□□ -0.89
TPR-204ENST00000469463 HOXB1P14653 301 aaPredicted RBP9.46□□□□□ -0.9
TPR-204ENST00000469463 HS3ST6Q96QI5 342 aa9.46□□□□□ -0.9
TPR-204ENST00000469463 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
TPR-204ENST00000469463 FAM205CA6NFA0 338 aa9.45□□□□□ -0.9
TPR-204ENST00000469463 STK25O00506 426 aa9.44□□□□□ -0.9
TPR-204ENST00000469463 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
TPR-204ENST00000469463 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
TPR-204ENST00000469463 FBXO22Q8NEZ5 403 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms