RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
LSM5-209ENST00000468872 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
LSM5-209ENST00000468872 FAM212AQ96EL1 285 aa14.81□□□□□ -0.04
LSM5-209ENST00000468872 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
LSM5-209ENST00000468872 POTEIP0CG38 1075 aa14.78□□□□□ -0.04
LSM5-209ENST00000468872 KIF12Q96FN5 646 aa14.78□□□□□ -0.04
LSM5-209ENST00000468872 MS4A3Q96HJ5 214 aa14.77□□□□□ -0.05
LSM5-209ENST00000468872 DCBLD2Q96PD2 775 aa14.77□□□□□ -0.05
LSM5-209ENST00000468872 DCAF8Q5TAQ9 597 aa14.72□□□□□ -0.05
LSM5-209ENST00000468872 MAP3K13O43283 966 aa14.71□□□□□ -0.05
LSM5-209ENST00000468872 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
LSM5-209ENST00000468872 GSE1Q14687 1217 aa14.63□□□□□ -0.07
LSM5-209ENST00000468872 PCDHB13Q9Y5F0 798 aa14.62□□□□□ -0.07
LSM5-209ENST00000468872 SGIP1Q9BQI5 828 aa14.61□□□□□ -0.07
LSM5-209ENST00000468872 PYGBP11216 843 aa14.6□□□□□ -0.07
LSM5-209ENST00000468872 TRPC6Q9Y210 931 aa14.59□□□□□ -0.07
LSM5-209ENST00000468872 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
LSM5-209ENST00000468872 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
LSM5-209ENST00000468872 IFNL1Q8IU54 200 aa14.55□□□□□ -0.08
LSM5-209ENST00000468872 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
LSM5-209ENST00000468872 TIE1P35590 1138 aa14.52□□□□□ -0.09
LSM5-209ENST00000468872 BMP2KQ9NSY1 1161 aaPredicted RBP14.52□□□□□ -0.09
LSM5-209ENST00000468872 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
LSM5-209ENST00000468872 ATN1P54259 1190 aaPredicted RBP14.49□□□□□ -0.09
LSM5-209ENST00000468872 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
LSM5-209ENST00000468872 LHX8Q68G74 356 aa14.47□□□□□ -0.09
LSM5-209ENST00000468872 TTLL13PA6NNM8 815 aa14.46□□□□□ -0.09
LSM5-209ENST00000468872 PCDHB8Q9UN66 801 aa14.45□□□□□ -0.1
LSM5-209ENST00000468872 SLC39A7Q92504 469 aa14.42□□□□□ -0.1
LSM5-209ENST00000468872 METRNQ9UJH8 293 aa14.41□□□□□ -0.1
LSM5-209ENST00000468872 C7P10643 843 aa14.4□□□□□ -0.1
LSM5-209ENST00000468872 ZNF467Q7Z7K2 595 aaPredicted RBP14.4□□□□□ -0.1
LSM5-209ENST00000468872 TMEM106CQ9BVX2 250 aa14.39□□□□□ -0.11
LSM5-209ENST00000468872 TRIM35Q9UPQ4 493 aa14.36□□□□□ -0.11
LSM5-209ENST00000468872 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
LSM5-209ENST00000468872 POTEB2H3BUK9 544 aa14.31□□□□□ -0.12
LSM5-209ENST00000468872 IER5LQ5T953 404 aa14.27□□□□□ -0.13
LSM5-209ENST00000468872 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
LSM5-209ENST00000468872 PSEN1P49768 467 aa14.26□□□□□ -0.13
LSM5-209ENST00000468872 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
LSM5-209ENST00000468872 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
LSM5-209ENST00000468872 SEC24BO95487 1268 aa14.22□□□□□ -0.13
LSM5-209ENST00000468872 POTEJP0CG39 1038 aa14.19□□□□□ -0.14
LSM5-209ENST00000468872 RNF25Q96BH1 459 aaPredicted RBP14.18□□□□□ -0.14
LSM5-209ENST00000468872 OTUD5Q96G74 571 aa14.17□□□□□ -0.14
LSM5-209ENST00000468872 RIOK3O14730 519 aaKnown RBP14.16□□□□□ -0.14
LSM5-209ENST00000468872 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
LSM5-209ENST00000468872 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
LSM5-209ENST00000468872 PKD2Q13563 968 aa14.14□□□□□ -0.15
LSM5-209ENST00000468872 ECM2O94769 699 aaPredicted RBP14.12□□□□□ -0.15
LSM5-209ENST00000468872 PLCG2P16885 1265 aa14.12□□□□□ -0.15
LSM5-209ENST00000468872 MKRN3Q13064 507 aaKnown RBP14.11□□□□□ -0.15
LSM5-209ENST00000468872 OCEL1Q9H607 264 aa14.1□□□□□ -0.15
LSM5-209ENST00000468872 CABP2Q9NPB3 220 aa14.09□□□□□ -0.15
LSM5-209ENST00000468872 MAMSTRQ6ZN01 415 aa14.08□□□□□ -0.16
LSM5-209ENST00000468872 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
LSM5-209ENST00000468872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.04□□□□□ -0.16
LSM5-209ENST00000468872 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
LSM5-209ENST00000468872 SCUBE2Q9NQ36 999 aa14.03□□□□□ -0.16
LSM5-209ENST00000468872 PDCD7Q8N8D1 485 aaKnown RBP14.02□□□□□ -0.17
LSM5-209ENST00000468872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.02□□□□□ -0.174e-7■□□□□ 10.5
LSM5-209ENST00000468872 RGL2O15211 777 aa14□□□□□ -0.17
LSM5-209ENST00000468872 TAOK2Q9UL54 1235 aa13.99□□□□□ -0.17
LSM5-209ENST00000468872 ILDR1Q86SU0 546 aaPredicted RBP13.98□□□□□ -0.17
LSM5-209ENST00000468872 EFCAB3Q8N7B9 438 aa13.97□□□□□ -0.17
LSM5-209ENST00000468872 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
LSM5-209ENST00000468872 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
LSM5-209ENST00000468872 STK25O00506 426 aa13.88□□□□□ -0.19
LSM5-209ENST00000468872 L3MBTL3Q96JM7 780 aaPredicted RBP13.88□□□□□ -0.19
LSM5-209ENST00000468872 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
LSM5-209ENST00000468872 SOX12O15370 315 aa13.86□□□□□ -0.19
LSM5-209ENST00000468872 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
LSM5-209ENST00000468872 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
LSM5-209ENST00000468872 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
LSM5-209ENST00000468872 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
LSM5-209ENST00000468872 BOLA1Q9Y3E2 137 aa13.79□□□□□ -0.2
LSM5-209ENST00000468872 MS4A4AQ96JQ5 239 aa13.78□□□□□ -0.2
LSM5-209ENST00000468872 G3V3G9 751 aa13.76□□□□□ -0.21
LSM5-209ENST00000468872 NLRP6P59044 892 aa13.75□□□□□ -0.21
LSM5-209ENST00000468872 FBXO22Q8NEZ5 403 aa13.73□□□□□ -0.21
LSM5-209ENST00000468872 MFRPQ9BY79 579 aa13.73□□□□□ -0.21
LSM5-209ENST00000468872 TMEM121BQ9BXQ6 578 aaPredicted RBP13.72□□□□□ -0.21
LSM5-209ENST00000468872 HS6ST3Q8IZP7 471 aa13.71□□□□□ -0.21
LSM5-209ENST00000468872 FAM163AQ96GL9 167 aaPredicted RBP13.7□□□□□ -0.22
LSM5-209ENST00000468872 CHGAP10645 457 aaKnown RBP13.68□□□□□ -0.22
LSM5-209ENST00000468872 MICALL2Q8IY33 904 aa13.68□□□□□ -0.22
LSM5-209ENST00000468872 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
LSM5-209ENST00000468872 SNPHO15079 494 aa13.6□□□□□ -0.23
LSM5-209ENST00000468872 POTEMA6NI47 508 aa13.59□□□□□ -0.23
LSM5-209ENST00000468872 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
LSM5-209ENST00000468872 ST18O60284 1047 aa13.56□□□□□ -0.24
LSM5-209ENST00000468872 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
LSM5-209ENST00000468872 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
LSM5-209ENST00000468872 TMEM92Q6UXU6 159 aa13.55□□□□□ -0.24
LSM5-209ENST00000468872 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
LSM5-209ENST00000468872 NKX1-1Q15270 411 aaPredicted RBP13.53□□□□□ -0.24
LSM5-209ENST00000468872 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
LSM5-209ENST00000468872 PPP1R37O75864 691 aa13.52□□□□□ -0.25
LSM5-209ENST00000468872 HOXB3P14651 431 aaPredicted RBP13.46□□□□□ -0.25
LSM5-209ENST00000468872 RYDENQ9NUL5 291 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms