RNA–Protein interactions for RNA: ENST00000467748.1

RABGGTB-206, Transcript of Rab geranylgeranyltransferase subunit beta, humanhuman

TSL 3

Gene RABGGTB, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTB-206ENST00000467748 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
RABGGTB-206ENST00000467748 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
RABGGTB-206ENST00000467748 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
RABGGTB-206ENST00000467748 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
RABGGTB-206ENST00000467748 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
RABGGTB-206ENST00000467748 PHF12Q96QT6 1004 aa12.8□□□□□ -0.36
RABGGTB-206ENST00000467748 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
RABGGTB-206ENST00000467748 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
RABGGTB-206ENST00000467748 RASEFQ8IZ41 740 aa12.74□□□□□ -0.37
RABGGTB-206ENST00000467748 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
RABGGTB-206ENST00000467748 NUBP1P53384 320 aa12.73□□□□□ -0.37
RABGGTB-206ENST00000467748 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
RABGGTB-206ENST00000467748 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
RABGGTB-206ENST00000467748 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
RABGGTB-206ENST00000467748 LCE2DQ5TA82 110 aaPredicted RBP12.68□□□□□ -0.38
RABGGTB-206ENST00000467748 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
RABGGTB-206ENST00000467748 FAM163AQ96GL9 167 aaPredicted RBP12.64□□□□□ -0.39
RABGGTB-206ENST00000467748 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
RABGGTB-206ENST00000467748 SLC39A7Q92504 469 aa12.63□□□□□ -0.39
RABGGTB-206ENST00000467748 C7P10643 843 aa12.62□□□□□ -0.39
RABGGTB-206ENST00000467748 SPOCK2Q92563 424 aa12.62□□□□□ -0.39
RABGGTB-206ENST00000467748 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
RABGGTB-206ENST00000467748 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
RABGGTB-206ENST00000467748 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
RABGGTB-206ENST00000467748 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
RABGGTB-206ENST00000467748 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
RABGGTB-206ENST00000467748 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
RABGGTB-206ENST00000467748 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
RABGGTB-206ENST00000467748 PYGBP11216 843 aa12.48□□□□□ -0.41
RABGGTB-206ENST00000467748 KIF12Q96FN5 646 aa12.48□□□□□ -0.41
RABGGTB-206ENST00000467748 MAP3K13O43283 966 aa12.46□□□□□ -0.41
RABGGTB-206ENST00000467748 GSE1Q14687 1217 aa12.46□□□□□ -0.41
RABGGTB-206ENST00000467748 ATN1P54259 1190 aaPredicted RBP12.45□□□□□ -0.42
RABGGTB-206ENST00000467748 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
RABGGTB-206ENST00000467748 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
RABGGTB-206ENST00000467748 TRPC6Q9Y210 931 aa12.39□□□□□ -0.43
RABGGTB-206ENST00000467748 PCDHB13Q9Y5F0 798 aa12.39□□□□□ -0.43
RABGGTB-206ENST00000467748 IFNL1Q8IU54 200 aa12.36□□□□□ -0.43
RABGGTB-206ENST00000467748 PCDHB8Q9UN66 801 aa12.34□□□□□ -0.43
RABGGTB-206ENST00000467748 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
RABGGTB-206ENST00000467748 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
RABGGTB-206ENST00000467748 PKD2Q13563 968 aa12.31□□□□□ -0.44
RABGGTB-206ENST00000467748 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
RABGGTB-206ENST00000467748 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
RABGGTB-206ENST00000467748 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
RABGGTB-206ENST00000467748 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
RABGGTB-206ENST00000467748 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
RABGGTB-206ENST00000467748 SEC24BO95487 1268 aa12.22□□□□□ -0.45
RABGGTB-206ENST00000467748 TIE1P35590 1138 aa12.21□□□□□ -0.45
RABGGTB-206ENST00000467748 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
RABGGTB-206ENST00000467748 TTLL13PA6NNM8 815 aa12.2□□□□□ -0.46
RABGGTB-206ENST00000467748 RGL2O15211 777 aa12.18□□□□□ -0.46
RABGGTB-206ENST00000467748 ST18O60284 1047 aa12.18□□□□□ -0.46
RABGGTB-206ENST00000467748 TMEM106CQ9BVX2 250 aa12.18□□□□□ -0.46
RABGGTB-206ENST00000467748 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
RABGGTB-206ENST00000467748 PSEN1P49768 467 aa12.15□□□□□ -0.46
RABGGTB-206ENST00000467748 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
RABGGTB-206ENST00000467748 SLAIN1Q8ND83 568 aa12.14□□□□□ -0.47
RABGGTB-206ENST00000467748 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
RABGGTB-206ENST00000467748 SPNS2Q8IVW8 549 aa12.12□□□□□ -0.47
RABGGTB-206ENST00000467748 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
RABGGTB-206ENST00000467748 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
RABGGTB-206ENST00000467748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
RABGGTB-206ENST00000467748 IER5LQ5T953 404 aa12.07□□□□□ -0.48
RABGGTB-206ENST00000467748 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
RABGGTB-206ENST00000467748 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
RABGGTB-206ENST00000467748 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
RABGGTB-206ENST00000467748 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
RABGGTB-206ENST00000467748 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
RABGGTB-206ENST00000467748 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
RABGGTB-206ENST00000467748 STK25O00506 426 aa11.96□□□□□ -0.49
RABGGTB-206ENST00000467748 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
RABGGTB-206ENST00000467748 STK24Q9Y6E0 443 aa11.95□□□□□ -0.5
RABGGTB-206ENST00000467748 PLCG2P16885 1265 aa11.94□□□□□ -0.5
RABGGTB-206ENST00000467748 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
RABGGTB-206ENST00000467748 EFCAB3Q8N7B9 438 aa11.94□□□□□ -0.5
RABGGTB-206ENST00000467748 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
RABGGTB-206ENST00000467748 MARVELD3Q96A59 401 aa11.93□□□□□ -0.5
RABGGTB-206ENST00000467748 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
RABGGTB-206ENST00000467748 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
RABGGTB-206ENST00000467748 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
RABGGTB-206ENST00000467748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.515e-7■□□□□ 11.2
RABGGTB-206ENST00000467748 SNPHO15079 494 aa11.87□□□□□ -0.51
RABGGTB-206ENST00000467748 OCEL1Q9H607 264 aa11.87□□□□□ -0.51
RABGGTB-206ENST00000467748 PDCD7Q8N8D1 485 aaKnown RBP11.86□□□□□ -0.51
RABGGTB-206ENST00000467748 DPY19L2Q6NUT2 758 aa11.84□□□□□ -0.51
RABGGTB-206ENST00000467748 HS6ST3Q8IZP7 471 aa11.84□□□□□ -0.51
RABGGTB-206ENST00000467748 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
RABGGTB-206ENST00000467748 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
RABGGTB-206ENST00000467748 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
RABGGTB-206ENST00000467748 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
RABGGTB-206ENST00000467748 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
RABGGTB-206ENST00000467748 SOX12O15370 315 aa11.78□□□□□ -0.52
RABGGTB-206ENST00000467748 EMP3P54852 163 aa11.77□□□□□ -0.53
RABGGTB-206ENST00000467748 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
RABGGTB-206ENST00000467748 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
RABGGTB-206ENST00000467748 KRTAP3-3Q9BYR6 98 aa11.75□□□□□ -0.53
RABGGTB-206ENST00000467748 KRTAP3-2Q9BYR7 98 aa11.75□□□□□ -0.53
RABGGTB-206ENST00000467748 NLRP6P59044 892 aa11.72□□□□□ -0.53
RABGGTB-206ENST00000467748 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms