RNA–Protein interactions for RNA: ENST00000467744.2

CHM-202, Transcript of CHM, Rab escort protein 1, humanhuman

TSL 5

Gene CHM, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-202ENST00000467744 PCDH10Q9P2E7 1040 aa9.49□□□□□ -0.89
CHM-202ENST00000467744 ZNF579Q8NAF0 562 aaKnown RBP9.48□□□□□ -0.89
CHM-202ENST00000467744 STAG3Q9UJ98 1225 aa9.48□□□□□ -0.89
CHM-202ENST00000467744 GALR2O43603 387 aaPredicted RBP9.44□□□□□ -0.9
CHM-202ENST00000467744 CLCN6P51797 869 aa9.43□□□□□ -0.9
CHM-202ENST00000467744 DCBLD2Q96PD2 775 aa9.43□□□□□ -0.9
CHM-202ENST00000467744 MNX1P50219 401 aaPredicted RBP9.41□□□□□ -0.9
CHM-202ENST00000467744 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
CHM-202ENST00000467744 DNAJC5Q9H3Z4 198 aa9.39□□□□□ -0.91
CHM-202ENST00000467744 POTEB2H3BUK9 544 aa9.31□□□□□ -0.92
CHM-202ENST00000467744 PAK3O75914 559 aaPredicted RBP9.31□□□□□ -0.92
CHM-202ENST00000467744 NCAPD3P42695 1498 aa9.3□□□□□ -0.92
CHM-202ENST00000467744 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHM-202ENST00000467744 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
CHM-202ENST00000467744 PROM2Q8N271 834 aa9.29□□□□□ -0.92
CHM-202ENST00000467744 CUX2O14529 1486 aa9.28□□□□□ -0.92
CHM-202ENST00000467744 OTUD5Q96G74 571 aa9.27□□□□□ -0.93
CHM-202ENST00000467744 MS4A3Q96HJ5 214 aa9.25□□□□□ -0.93
CHM-202ENST00000467744 ERCC6Q03468 1493 aa9.25□□□□□ -0.93
CHM-202ENST00000467744 ATAD2BQ9ULI0 1458 aa9.23□□□□□ -0.93
CHM-202ENST00000467744 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
CHM-202ENST00000467744 SMARCA2P51531 1590 aa9.21□□□□□ -0.94
CHM-202ENST00000467744 HMGXB3Q12766 1538 aa9.19□□□□□ -0.94
CHM-202ENST00000467744 ATMINO43313 823 aaPredicted RBP9.18□□□□□ -0.94
CHM-202ENST00000467744 ASTLQ6HA08 431 aaPredicted RBP9.18□□□□□ -0.94
CHM-202ENST00000467744 CCDC61Q9Y6R9 512 aa9.17□□□□□ -0.94
CHM-202ENST00000467744 POTEJP0CG39 1038 aa9.16□□□□□ -0.94
CHM-202ENST00000467744 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
CHM-202ENST00000467744 METRNQ9UJH8 293 aa9.15□□□□□ -0.94
CHM-202ENST00000467744 POTEMA6NI47 508 aa9.14□□□□□ -0.95
CHM-202ENST00000467744 BAZ1AQ9NRL2 1556 aaPredicted RBP9.14□□□□□ -0.95
CHM-202ENST00000467744 BAZ1BQ9UIG0 1483 aaKnown RBP9.14□□□□□ -0.95
CHM-202ENST00000467744 KIF12Q96FN5 646 aa9.13□□□□□ -0.95
CHM-202ENST00000467744 TRPC6Q9Y210 931 aa9.13□□□□□ -0.95
CHM-202ENST00000467744 ATN1P54259 1190 aaPredicted RBP9.12□□□□□ -0.95
CHM-202ENST00000467744 RASEFQ8IZ41 740 aa9.11□□□□□ -0.95
CHM-202ENST00000467744 NESP48681 1621 aa9.1□□□□□ -0.95
CHM-202ENST00000467744 MIER1Q8N108 512 aa9.1□□□□□ -0.95
CHM-202ENST00000467744 SLC39A7Q92504 469 aa9.1□□□□□ -0.95
CHM-202ENST00000467744 PEG3Q9GZU2 1588 aa9.09□□□□□ -0.95
CHM-202ENST00000467744 C7P10643 843 aa9.09□□□□□ -0.95
CHM-202ENST00000467744 MAP3K13O43283 966 aa9.08□□□□□ -0.96
CHM-202ENST00000467744 PDS5BQ9NTI5 1447 aa9.08□□□□□ -0.96
CHM-202ENST00000467744 BMP2KQ9NSY1 1161 aaPredicted RBP9.07□□□□□ -0.96
CHM-202ENST00000467744 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
CHM-202ENST00000467744 POTEFA5A3E0 1075 aa9.06□□□□□ -0.96
CHM-202ENST00000467744 POTEGQ6S5H5 508 aa9.03□□□□□ -0.96
CHM-202ENST00000467744 MROH2BQ7Z745 1585 aa9.03□□□□□ -0.96
CHM-202ENST00000467744 THOC2Q8NI27 1593 aaKnown RBP9.02□□□□□ -0.97
CHM-202ENST00000467744 CADPSQ9ULU8 1353 aa9.02□□□□□ -0.97
CHM-202ENST00000467744 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
CHM-202ENST00000467744 PLCD3Q8N3E9 789 aa9□□□□□ -0.97
CHM-202ENST00000467744 LCE2DQ5TA82 110 aaPredicted RBP8.98□□□□□ -0.97
CHM-202ENST00000467744 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
CHM-202ENST00000467744 TIE1P35590 1138 aa8.98□□□□□ -0.97
CHM-202ENST00000467744 NUBP1P53384 320 aa8.98□□□□□ -0.97
CHM-202ENST00000467744 COLQQ9Y215 455 aaPredicted RBP8.97□□□□□ -0.97
CHM-202ENST00000467744 MRC2Q9UBG0 1479 aa8.96□□□□□ -0.97
CHM-202ENST00000467744 MAMSTRQ6ZN01 415 aa8.96□□□□□ -0.98
CHM-202ENST00000467744 PCDHB13Q9Y5F0 798 aa8.93□□□□□ -0.98
CHM-202ENST00000467744 KIF21AQ7Z4S6 1674 aa8.93□□□□□ -0.98
CHM-202ENST00000467744 FKBP8Q14318 412 aa8.93□□□□□ -0.98
CHM-202ENST00000467744 SCUBE2Q9NQ36 999 aa8.93□□□□□ -0.98
CHM-202ENST00000467744 WDR62O43379 1518 aa8.92□□□□□ -0.98
CHM-202ENST00000467744 FAM163AQ96GL9 167 aaPredicted RBP8.92□□□□□ -0.98
CHM-202ENST00000467744 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
CHM-202ENST00000467744 TRIM35Q9UPQ4 493 aa8.92□□□□□ -0.98
CHM-202ENST00000467744 CEP164Q9UPV0 1460 aa8.91□□□□□ -0.98
CHM-202ENST00000467744 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
CHM-202ENST00000467744 SEC24BO95487 1268 aa8.88□□□□□ -0.99
CHM-202ENST00000467744 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
CHM-202ENST00000467744 FANCD2Q9BXW9 1451 aa8.88□□□□□ -0.99
CHM-202ENST00000467744 CFTRP13569 1480 aa8.88□□□□□ -0.99
CHM-202ENST00000467744 WIZO95785 1651 aa8.87□□□□□ -0.99
CHM-202ENST00000467744 ZBTB47Q9UFB7 747 aaPredicted RBP8.87□□□□□ -0.99
CHM-202ENST00000467744 FAM212AQ96EL1 285 aa8.85□□□□□ -0.99
CHM-202ENST00000467744 RSF1Q96T23 1441 aaPredicted RBP8.84□□□□□ -0.99
CHM-202ENST00000467744 IER5LQ5T953 404 aa8.84□□□□□ -0.99
CHM-202ENST00000467744 TMEM106CQ9BVX2 250 aa8.84□□□□□ -0.99
CHM-202ENST00000467744 TOP2AP11388 1531 aaKnown RBP8.82□□□□□ -1
CHM-202ENST00000467744 PYGBP11216 843 aa8.81□□□□□ -1
CHM-202ENST00000467744 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
CHM-202ENST00000467744 DCAF8Q5TAQ9 597 aa8.79□□□□□ -1
CHM-202ENST00000467744 IRX5P78411 483 aaPredicted RBP8.78□□□□□ -1
CHM-202ENST00000467744 PCDHB8Q9UN66 801 aa8.77□□□□□ -1.01
CHM-202ENST00000467744 SLAIN1Q8ND83 568 aa8.76□□□□□ -1.01
CHM-202ENST00000467744 IFT140Q96RY7 1462 aa8.76□□□□□ -1.01
CHM-202ENST00000467744 PLCG2P16885 1265 aa8.75□□□□□ -1.01
CHM-202ENST00000467744 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
CHM-202ENST00000467744 ST18O60284 1047 aa8.72□□□□□ -1.01
CHM-202ENST00000467744 CCDC88BA6NC98 1476 aa8.72□□□□□ -1.01
CHM-202ENST00000467744 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
CHM-202ENST00000467744 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
CHM-202ENST00000467744 FBXO3Q9UK99 471 aa8.7□□□□□ -1.02
CHM-202ENST00000467744 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
CHM-202ENST00000467744 ZNF608Q9ULD9 1512 aaPredicted RBP8.69□□□□□ -1.02
CHM-202ENST00000467744 VASPP50552 380 aaPredicted RBP8.67□□□□□ -1.02
CHM-202ENST00000467744 RIMBP3CA6NJZ7 1639 aa8.66□□□□□ -1.02
CHM-202ENST00000467744 RIMBP3BA6NNM3 1639 aa8.66□□□□□ -1.02
CHM-202ENST00000467744 RIMBP3Q9UFD9 1639 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms