RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 SPRYD3Q8NCJ5 442 aa11.37□□□□□ -0.59
SPTBN1-204ENST00000467371 BCCIPQ9P287 314 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPTBN1-204ENST00000467371 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
SPTBN1-204ENST00000467371 PKNOX2Q96KN3 472 aa11.34□□□□□ -0.59
SPTBN1-204ENST00000467371 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
SPTBN1-204ENST00000467371 ACIN1Q9UKV3 1341 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-204ENST00000467371 FGD1P98174 961 aa11.3□□□□□ -0.6
SPTBN1-204ENST00000467371 RSPH4AQ5TD94 716 aa11.29□□□□□ -0.6
SPTBN1-204ENST00000467371 ZEB1P37275 1124 aaPredicted RBP11.27□□□□□ -0.61
SPTBN1-204ENST00000467371 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
SPTBN1-204ENST00000467371 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
SPTBN1-204ENST00000467371 DNAJC5BQ9UF47 199 aa11.23□□□□□ -0.61
SPTBN1-204ENST00000467371 ZNF428Q96B54 188 aa11.23□□□□□ -0.61
SPTBN1-204ENST00000467371 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-204ENST00000467371 RAD21O60216 631 aa11.22□□□□□ -0.61
SPTBN1-204ENST00000467371 POLR3GLQ9BT43 218 aa11.22□□□□□ -0.61
SPTBN1-204ENST00000467371 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
SPTBN1-204ENST00000467371 NEUROD1Q13562 356 aa11.19□□□□□ -0.62
SPTBN1-204ENST00000467371 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
SPTBN1-204ENST00000467371 TICAM2Q86XR7 235 aa11.15□□□□□ -0.62
SPTBN1-204ENST00000467371 CENPBP07199 599 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-204ENST00000467371 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
SPTBN1-204ENST00000467371 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
SPTBN1-204ENST00000467371 FAM177A1Q8N128 213 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-204ENST00000467371 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
SPTBN1-204ENST00000467371 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
SPTBN1-204ENST00000467371 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
SPTBN1-204ENST00000467371 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
SPTBN1-204ENST00000467371 FOXD4L5Q5VV16 416 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-204ENST00000467371 FOXD4L4Q8WXT5 416 aaPredicted RBP11.09□□□□□ -0.63
SPTBN1-204ENST00000467371 ZFP91Q96JP5 570 aaPredicted RBP11.08□□□□□ -0.64
SPTBN1-204ENST00000467371 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
SPTBN1-204ENST00000467371 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-204ENST00000467371 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
SPTBN1-204ENST00000467371 CERS3Q8IU89 383 aa11.04□□□□□ -0.64
SPTBN1-204ENST00000467371 TRAIPQ9BWF2 469 aa11.04□□□□□ -0.64
SPTBN1-204ENST00000467371 CLSTN1O94985 981 aa11.04□□□□□ -0.64
SPTBN1-204ENST00000467371 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.64
SPTBN1-204ENST00000467371 APBB1O00213 710 aa11.02□□□□□ -0.65
SPTBN1-204ENST00000467371 CWC22Q9HCG8 908 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-204ENST00000467371 ZCCHC6Q5VYS8 1495 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-204ENST00000467371 IRX6P78412 446 aaPredicted RBP11.01□□□□□ -0.65
SPTBN1-204ENST00000467371 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
SPTBN1-204ENST00000467371 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
SPTBN1-204ENST00000467371 PSMD1Q99460 953 aa10.97□□□□□ -0.65
SPTBN1-204ENST00000467371 CCDC136Q96JN2 1154 aa10.97□□□□□ -0.65
SPTBN1-204ENST00000467371 RGL2O15211 777 aa10.97□□□□□ -0.65
SPTBN1-204ENST00000467371 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
SPTBN1-204ENST00000467371 USP35Q9P2H5 1018 aa10.96□□□□□ -0.66
SPTBN1-204ENST00000467371 TMCO4Q5TGY1 634 aa10.95□□□□□ -0.66
SPTBN1-204ENST00000467371 ANP32EQ9BTT0 268 aa10.95□□□□□ -0.66
SPTBN1-204ENST00000467371 E9PSI1 815 aa10.93□□□□□ -0.66
SPTBN1-204ENST00000467371 FOXD1Q16676 465 aa10.92□□□□□ -0.66
SPTBN1-204ENST00000467371 AAMPQ13685 434 aa10.92□□□□□ -0.66
SPTBN1-204ENST00000467371 PRDM16Q9HAZ2 1276 aa10.92□□□□□ -0.66
SPTBN1-204ENST00000467371 PIAS4Q8N2W9 510 aaPredicted RBP10.91□□□□□ -0.66
SPTBN1-204ENST00000467371 CCDC125Q86Z20 511 aa10.9□□□□□ -0.66
SPTBN1-204ENST00000467371 CCDC82Q8N4S0 544 aa10.89□□□□□ -0.67
SPTBN1-204ENST00000467371 AEBP1Q8IUX7 1158 aa10.86□□□□□ -0.67
SPTBN1-204ENST00000467371 SLC24A3Q9HC58 644 aa10.86□□□□□ -0.67
SPTBN1-204ENST00000467371 NAP1L5Q96NT1 182 aaPredicted RBP10.86□□□□□ -0.67
SPTBN1-204ENST00000467371 PPM1GO15355 546 aaPredicted RBP10.86□□□□□ -0.67
SPTBN1-204ENST00000467371 CADPSQ9ULU8 1353 aa10.86□□□□□ -0.67
SPTBN1-204ENST00000467371 ABCC9O60706 1549 aa10.86□□□□□ -0.67
SPTBN1-204ENST00000467371 PROM2Q8N271 834 aa10.85□□□□□ -0.67
SPTBN1-204ENST00000467371 CCDC27Q2M243 656 aa10.83□□□□□ -0.68
SPTBN1-204ENST00000467371 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-204ENST00000467371 GZF1Q9H116 711 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-204ENST00000467371 MAPK8IP2Q13387 824 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-204ENST00000467371 TEX2Q8IWB9 1127 aa10.82□□□□□ -0.68
SPTBN1-204ENST00000467371 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
SPTBN1-204ENST00000467371 ARID4BQ4LE39 1312 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-204ENST00000467371 A0A0U1RQG5 324 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-204ENST00000467371 ANO8Q9HCE9 1232 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-204ENST00000467371 MKRN3Q13064 507 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-204ENST00000467371 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-204ENST00000467371 DIEXFQ68CQ4 756 aaKnown RBP10.78□□□□□ -0.68
SPTBN1-204ENST00000467371 TRIM41Q8WV44 630 aa10.77□□□□□ -0.69
SPTBN1-204ENST00000467371 NCLP19338 710 aaKnown RBP10.74□□□□□ -0.69
SPTBN1-204ENST00000467371 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
SPTBN1-204ENST00000467371 SCRIBQ14160 1630 aa10.74□□□□□ -0.69
SPTBN1-204ENST00000467371 KDM4AO75164 1064 aa10.72□□□□□ -0.69
SPTBN1-204ENST00000467371 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-204ENST00000467371 IGSF5Q9NSI5 407 aa10.72□□□□□ -0.69
SPTBN1-204ENST00000467371 SETQ01105 290 aaPredicted RBP10.71□□□□□ -0.69
SPTBN1-204ENST00000467371 BARGINQ6ZT62 677 aa10.71□□□□□ -0.7
SPTBN1-204ENST00000467371 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
SPTBN1-204ENST00000467371 CHRM1P11229 460 aaPredicted RBP10.69□□□□□ -0.7
SPTBN1-204ENST00000467371 IRF5Q13568 498 aa10.69□□□□□ -0.7
SPTBN1-204ENST00000467371 MAFGO15525 162 aa10.69□□□□□ -0.7
SPTBN1-204ENST00000467371 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
SPTBN1-204ENST00000467371 ZNF526Q8TF50 670 aaPredicted RBP10.67□□□□□ -0.7
SPTBN1-204ENST00000467371 PLCD4Q9BRC7 762 aa10.66□□□□□ -0.7
SPTBN1-204ENST00000467371 AMOTL2Q9Y2J4 779 aa10.66□□□□□ -0.7
SPTBN1-204ENST00000467371 CANXP27824 592 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-204ENST00000467371 IL27Q8NEV9 243 aa10.64□□□□□ -0.71
SPTBN1-204ENST00000467371 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
SPTBN1-204ENST00000467371 HS6ST3Q8IZP7 471 aa10.64□□□□□ -0.71
SPTBN1-204ENST00000467371 TRAK2O60296 914 aa10.63□□□□□ -0.71
SPTBN1-204ENST00000467371 GRIPAP1Q4V328 841 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms