RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 GSE1Q14687 1217 aa16.37■□□□□ 0.21
CCNL1-209ENST00000467081 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
CCNL1-209ENST00000467081 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
CCNL1-209ENST00000467081 PHF12Q96QT6 1004 aa16.33■□□□□ 0.2
CCNL1-209ENST00000467081 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
CCNL1-209ENST00000467081 PYGBP11216 843 aa16.26■□□□□ 0.19
CCNL1-209ENST00000467081 KIF12Q96FN5 646 aa16.2■□□□□ 0.18
CCNL1-209ENST00000467081 MAP3K13O43283 966 aa16.17■□□□□ 0.18
CCNL1-209ENST00000467081 GABBR2O75899 941 aa16.17■□□□□ 0.18
CCNL1-209ENST00000467081 PKD2Q13563 968 aa16.17■□□□□ 0.18
CCNL1-209ENST00000467081 TRIM41Q8WV44 630 aa16.14■□□□□ 0.17
CCNL1-209ENST00000467081 CHRM1P11229 460 aaPredicted RBP16.13■□□□□ 0.17
CCNL1-209ENST00000467081 CLCN6P51797 869 aa16.13■□□□□ 0.17
CCNL1-209ENST00000467081 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
CCNL1-209ENST00000467081 PCDHB13Q9Y5F0 798 aa16.12■□□□□ 0.17
CCNL1-209ENST00000467081 GALR2O43603 387 aaPredicted RBP16.11■□□□□ 0.17
CCNL1-209ENST00000467081 MS4A3Q96HJ5 214 aa16.11■□□□□ 0.17
CCNL1-209ENST00000467081 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
CCNL1-209ENST00000467081 SGIP1Q9BQI5 828 aa16.06■□□□□ 0.16
CCNL1-209ENST00000467081 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
CCNL1-209ENST00000467081 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
CCNL1-209ENST00000467081 PCDHB8Q9UN66 801 aa16.04■□□□□ 0.16
CCNL1-209ENST00000467081 ZNF467Q7Z7K2 595 aaPredicted RBP16■□□□□ 0.15
CCNL1-209ENST00000467081 RNF25Q96BH1 459 aaPredicted RBP15.97■□□□□ 0.15
CCNL1-209ENST00000467081 TRPC6Q9Y210 931 aa15.97■□□□□ 0.15
CCNL1-209ENST00000467081 RGL2O15211 777 aa15.95■□□□□ 0.14
CCNL1-209ENST00000467081 RIOK3O14730 519 aaKnown RBP15.93■□□□□ 0.14
CCNL1-209ENST00000467081 DCBLD2Q96PD2 775 aa15.92■□□□□ 0.14
CCNL1-209ENST00000467081 TIE1P35590 1138 aa15.86■□□□□ 0.13
CCNL1-209ENST00000467081 PDAP1Q13442 181 aaKnown RBP15.85■□□□□ 0.13
CCNL1-209ENST00000467081 BMP2KQ9NSY1 1161 aaPredicted RBP15.85■□□□□ 0.13
CCNL1-209ENST00000467081 PSEN1P49768 467 aa15.84■□□□□ 0.13
CCNL1-209ENST00000467081 TMEM106CQ9BVX2 250 aa15.84■□□□□ 0.13
CCNL1-209ENST00000467081 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
CCNL1-209ENST00000467081 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
CCNL1-209ENST00000467081 TTLL13PA6NNM8 815 aa15.81■□□□□ 0.12
CCNL1-209ENST00000467081 ATMINO43313 823 aaPredicted RBP15.8■□□□□ 0.12
CCNL1-209ENST00000467081 ASTLQ6HA08 431 aaPredicted RBP15.8■□□□□ 0.12
CCNL1-209ENST00000467081 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
CCNL1-209ENST00000467081 DCAF8L2P0C7V8 631 aa15.78■□□□□ 0.12
CCNL1-209ENST00000467081 ATN1P54259 1190 aaPredicted RBP15.78■□□□□ 0.12
CCNL1-209ENST00000467081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.77■□□□□ 0.12
CCNL1-209ENST00000467081 ZFP91Q96JP5 570 aaPredicted RBP15.77■□□□□ 0.12
CCNL1-209ENST00000467081 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
CCNL1-209ENST00000467081 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
CCNL1-209ENST00000467081 STK25O00506 426 aa15.69■□□□□ 0.1
CCNL1-209ENST00000467081 BCL11BQ9C0K0 894 aaPredicted RBP15.68■□□□□ 0.1
CCNL1-209ENST00000467081 CABP2Q9NPB3 220 aa15.67■□□□□ 0.1
CCNL1-209ENST00000467081 STK24Q9Y6E0 443 aa15.67■□□□□ 0.1
CCNL1-209ENST00000467081 GOLGA2Q08379 1002 aa15.66■□□□□ 0.1
CCNL1-209ENST00000467081 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
CCNL1-209ENST00000467081 SLC39A7Q92504 469 aa15.6■□□□□ 0.09
CCNL1-209ENST00000467081 MKRN3Q13064 507 aaKnown RBP15.59■□□□□ 0.09
CCNL1-209ENST00000467081 HS6ST3Q8IZP7 471 aa15.59■□□□□ 0.09
CCNL1-209ENST00000467081 EFCAB3Q8N7B9 438 aa15.57■□□□□ 0.08
CCNL1-209ENST00000467081 METRNQ9UJH8 293 aa15.57■□□□□ 0.08
CCNL1-209ENST00000467081 C7P10643 843 aa15.56■□□□□ 0.08
CCNL1-209ENST00000467081 IER5LQ5T953 404 aa15.55■□□□□ 0.08
CCNL1-209ENST00000467081 SEC24BO95487 1268 aa15.51■□□□□ 0.07
CCNL1-209ENST00000467081 COLQQ9Y215 455 aaPredicted RBP15.48■□□□□ 0.07
CCNL1-209ENST00000467081 IRX5P78411 483 aaPredicted RBP15.47■□□□□ 0.07
CCNL1-209ENST00000467081 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.47■□□□□ 0.074e-9■■□□□ 14
CCNL1-209ENST00000467081 POTEFA5A3E0 1075 aa15.45■□□□□ 0.06
CCNL1-209ENST00000467081 SOX12O15370 315 aa15.45■□□□□ 0.06
CCNL1-209ENST00000467081 PLCG2P16885 1265 aa15.45■□□□□ 0.06
CCNL1-209ENST00000467081 OCEL1Q9H607 264 aa15.44■□□□□ 0.06
CCNL1-209ENST00000467081 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
CCNL1-209ENST00000467081 MFRPQ9BY79 579 aa15.4■□□□□ 0.06
CCNL1-209ENST00000467081 DNAJC5Q9H3Z4 198 aa15.4■□□□□ 0.06
CCNL1-209ENST00000467081 PDCD7Q8N8D1 485 aaKnown RBP15.39■□□□□ 0.05
CCNL1-209ENST00000467081 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
CCNL1-209ENST00000467081 NLRP6P59044 892 aa15.37■□□□□ 0.05
CCNL1-209ENST00000467081 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
CCNL1-209ENST00000467081 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
CCNL1-209ENST00000467081 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
CCNL1-209ENST00000467081 BBXQ8WY36 941 aaPredicted RBP15.34■□□□□ 0.05
CCNL1-209ENST00000467081 DPY19L2Q6NUT2 758 aa15.33■□□□□ 0.04
CCNL1-209ENST00000467081 MS4A4AQ96JQ5 239 aa15.33■□□□□ 0.04
CCNL1-209ENST00000467081 LHX8Q68G74 356 aa15.29■□□□□ 0.04
CCNL1-209ENST00000467081 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
CCNL1-209ENST00000467081 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
CCNL1-209ENST00000467081 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
CCNL1-209ENST00000467081 RYDENQ9NUL5 291 aaKnown RBP15.23■□□□□ 0.03
CCNL1-209ENST00000467081 GTPBP6O43824 516 aaPredicted RBP15.22■□□□□ 0.03
CCNL1-209ENST00000467081 G3V3G9 751 aa15.21■□□□□ 0.03
CCNL1-209ENST00000467081 BOLA1Q9Y3E2 137 aa15.2■□□□□ 0.02
CCNL1-209ENST00000467081 PPP1R37O75864 691 aa15.19■□□□□ 0.02
CCNL1-209ENST00000467081 PAXIP1Q6ZW49 1069 aaPredicted RBP15.15■□□□□ 0.02
CCNL1-209ENST00000467081 SPRYD3Q8NCJ5 442 aa15.15■□□□□ 0.02
CCNL1-209ENST00000467081 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
CCNL1-209ENST00000467081 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
CCNL1-209ENST00000467081 MAMSTRQ6ZN01 415 aa15.13■□□□□ 0.01
CCNL1-209ENST00000467081 SCUBE2Q9NQ36 999 aa15.13■□□□□ 0.01
CCNL1-209ENST00000467081 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
CCNL1-209ENST00000467081 TMEM121BQ9BXQ6 578 aaPredicted RBP15.11■□□□□ 0.01
CCNL1-209ENST00000467081 OTUD5Q96G74 571 aa15.1■□□□□ 0.01
CCNL1-209ENST00000467081 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
CCNL1-209ENST00000467081 SLAIN1Q8ND83 568 aa15□□□□□ -0.01
CCNL1-209ENST00000467081 PLCB2Q00722 1185 aa14.96□□□□□ -0.01
CCNL1-209ENST00000467081 TMEM92Q6UXU6 159 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms