RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 SHROOM4Q9ULL8 1493 aa7.04□□□□□ -1.28
SORT1-202ENST00000466471 DCBLD2Q96PD2 775 aa7.04□□□□□ -1.28
SORT1-202ENST00000466471 CLCN6P51797 869 aa7.03□□□□□ -1.28
SORT1-202ENST00000466471 GALR2O43603 387 aaPredicted RBP7□□□□□ -1.29
SORT1-202ENST00000466471 PHF12Q96QT6 1004 aa7□□□□□ -1.29
SORT1-202ENST00000466471 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
SORT1-202ENST00000466471 NPM1P06748 294 aaKnown RBP eCLIP6.99□□□□□ -1.29
SORT1-202ENST00000466471 MNX1P50219 401 aaPredicted RBP6.99□□□□□ -1.29
SORT1-202ENST00000466471 EIF4G1Q04637 1599 aaKnown RBP6.99□□□□□ -1.29
SORT1-202ENST00000466471 PROM2Q8N271 834 aa6.94□□□□□ -1.3
SORT1-202ENST00000466471 TSPYL2Q9H2G4 693 aaPredicted RBP6.91□□□□□ -1.3
SORT1-202ENST00000466471 FKBP8Q14318 412 aa6.89□□□□□ -1.31
SORT1-202ENST00000466471 PELP1Q8IZL8 1130 aaKnown RBP6.89□□□□□ -1.31
SORT1-202ENST00000466471 MS4A3Q96HJ5 214 aa6.89□□□□□ -1.31
SORT1-202ENST00000466471 MIER1Q8N108 512 aa6.87□□□□□ -1.31
SORT1-202ENST00000466471 POTEB2H3BUK9 544 aa6.86□□□□□ -1.31
SORT1-202ENST00000466471 OTUD5Q96G74 571 aa6.84□□□□□ -1.31
SORT1-202ENST00000466471 CCDC61Q9Y6R9 512 aa6.84□□□□□ -1.31
SORT1-202ENST00000466471 MYO15BQ96JP2 1530 aa6.84□□□□□ -1.31
SORT1-202ENST00000466471 ERCC6Q03468 1493 aa6.84□□□□□ -1.31
SORT1-202ENST00000466471 PLEKHG5O94827 1062 aa6.83□□□□□ -1.32
SORT1-202ENST00000466471 ATMINO43313 823 aaPredicted RBP6.82□□□□□ -1.32
SORT1-202ENST00000466471 ASTLQ6HA08 431 aaPredicted RBP6.82□□□□□ -1.32
SORT1-202ENST00000466471 RASEFQ8IZ41 740 aa6.81□□□□□ -1.32
SORT1-202ENST00000466471 METRNQ9UJH8 293 aa6.81□□□□□ -1.32
SORT1-202ENST00000466471 PLCD3Q8N3E9 789 aa6.8□□□□□ -1.32
SORT1-202ENST00000466471 KIF12Q96FN5 646 aa6.8□□□□□ -1.32
SORT1-202ENST00000466471 THOC2Q8NI27 1593 aaKnown RBP6.78□□□□□ -1.32
SORT1-202ENST00000466471 MAP3K13O43283 966 aa6.78□□□□□ -1.32
SORT1-202ENST00000466471 C7P10643 843 aa6.78□□□□□ -1.32
SORT1-202ENST00000466471 ATN1P54259 1190 aaPredicted RBP6.78□□□□□ -1.32
SORT1-202ENST00000466471 SLC39A7Q92504 469 aa6.78□□□□□ -1.32
SORT1-202ENST00000466471 TRPC6Q9Y210 931 aa6.78□□□□□ -1.32
SORT1-202ENST00000466471 POTEJP0CG39 1038 aa6.76□□□□□ -1.33
SORT1-202ENST00000466471 ILDR1Q86SU0 546 aaPredicted RBP6.75□□□□□ -1.33
SORT1-202ENST00000466471 BMP2KQ9NSY1 1161 aaPredicted RBP6.75□□□□□ -1.33
SORT1-202ENST00000466471 NUBP1P53384 320 aa6.72□□□□□ -1.33
SORT1-202ENST00000466471 PLSCR2Q9NRY7 297 aa6.72□□□□□ -1.33
SORT1-202ENST00000466471 POTEFA5A3E0 1075 aa6.7□□□□□ -1.34
SORT1-202ENST00000466471 TIE1P35590 1138 aa6.7□□□□□ -1.34
SORT1-202ENST00000466471 ZBTB47Q9UFB7 747 aaPredicted RBP6.7□□□□□ -1.34
SORT1-202ENST00000466471 PCDHB13Q9Y5F0 798 aa6.7□□□□□ -1.34
SORT1-202ENST00000466471 BAZ1AQ9NRL2 1556 aaPredicted RBP6.69□□□□□ -1.34
SORT1-202ENST00000466471 RIMBP3CA6NJZ7 1639 aa6.69□□□□□ -1.34
SORT1-202ENST00000466471 RIMBP3BA6NNM3 1639 aa6.69□□□□□ -1.34
SORT1-202ENST00000466471 RIMBP3Q9UFD9 1639 aa6.69□□□□□ -1.34
SORT1-202ENST00000466471 TTLL13PA6NNM8 815 aa6.69□□□□□ -1.34
SORT1-202ENST00000466471 POTEMA6NI47 508 aa6.68□□□□□ -1.34
SORT1-202ENST00000466471 MAMSTRQ6ZN01 415 aa6.68□□□□□ -1.34
SORT1-202ENST00000466471 COLQQ9Y215 455 aaPredicted RBP6.67□□□□□ -1.34
SORT1-202ENST00000466471 SEC24BO95487 1268 aa6.66□□□□□ -1.34
SORT1-202ENST00000466471 POTEGQ6S5H5 508 aa6.66□□□□□ -1.34
SORT1-202ENST00000466471 IFNL1Q8IU54 200 aa6.66□□□□□ -1.34
SORT1-202ENST00000466471 FAM212AQ96EL1 285 aa6.66□□□□□ -1.34
SORT1-202ENST00000466471 SCUBE2Q9NQ36 999 aa6.66□□□□□ -1.34
SORT1-202ENST00000466471 FBXO3Q9UK99 471 aa6.66□□□□□ -1.34
SORT1-202ENST00000466471 SGIP1Q9BQI5 828 aa6.65□□□□□ -1.34
SORT1-202ENST00000466471 TRIM35Q9UPQ4 493 aa6.65□□□□□ -1.34
SORT1-202ENST00000466471 PLCB2Q00722 1185 aa6.64□□□□□ -1.35
SORT1-202ENST00000466471 DCAF8Q5TAQ9 597 aa6.64□□□□□ -1.35
SORT1-202ENST00000466471 FAM163AQ96GL9 167 aaPredicted RBP6.64□□□□□ -1.35
SORT1-202ENST00000466471 TMEM106CQ9BVX2 250 aa6.62□□□□□ -1.35
SORT1-202ENST00000466471 PYGBP11216 843 aa6.61□□□□□ -1.35
SORT1-202ENST00000466471 IER5LQ5T953 404 aa6.6□□□□□ -1.35
SORT1-202ENST00000466471 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
SORT1-202ENST00000466471 SCRIBQ14160 1630 aa6.6□□□□□ -1.35
SORT1-202ENST00000466471 NESP48681 1621 aa6.59□□□□□ -1.35
SORT1-202ENST00000466471 ARHGEF11O15085 1522 aa6.59□□□□□ -1.35
SORT1-202ENST00000466471 KLHL34Q8N239 644 aa6.58□□□□□ -1.36
SORT1-202ENST00000466471 PCDHB8Q9UN66 801 aa6.58□□□□□ -1.36
SORT1-202ENST00000466471 DCAF8L2P0C7V8 631 aa6.57□□□□□ -1.36
SORT1-202ENST00000466471 BCANQ96GW7 911 aa6.57□□□□□ -1.36
SORT1-202ENST00000466471 PCDH10Q9P2E7 1040 aa6.57□□□□□ -1.36
SORT1-202ENST00000466471 KIF21AQ7Z4S6 1674 aa6.57□□□□□ -1.36
SORT1-202ENST00000466471 SMARCA2P51531 1590 aa6.57□□□□□ -1.36
SORT1-202ENST00000466471 PLCG2P16885 1265 aa6.55□□□□□ -1.36
SORT1-202ENST00000466471 VASPP50552 380 aaPredicted RBP6.55□□□□□ -1.36
SORT1-202ENST00000466471 SLAIN1Q8ND83 568 aa6.54□□□□□ -1.36
SORT1-202ENST00000466471 IRX5P78411 483 aaPredicted RBP6.53□□□□□ -1.36
SORT1-202ENST00000466471 VSIG10Q8N0Z9 540 aa6.53□□□□□ -1.36
SORT1-202ENST00000466471 LAMC3Q9Y6N6 1575 aa6.52□□□□□ -1.36
SORT1-202ENST00000466471 NCAPD3P42695 1498 aa6.52□□□□□ -1.37
SORT1-202ENST00000466471 OCEL1Q9H607 264 aa6.51□□□□□ -1.37
SORT1-202ENST00000466471 WDR62O43379 1518 aa6.5□□□□□ -1.37
SORT1-202ENST00000466471 GSE1Q14687 1217 aa6.5□□□□□ -1.37
SORT1-202ENST00000466471 HMGXB3Q12766 1538 aa6.49□□□□□ -1.37
SORT1-202ENST00000466471 DCAF1Q9Y4B6 1507 aa6.49□□□□□ -1.37
SORT1-202ENST00000466471 ARAP1Q96P48 1450 aa6.48□□□□□ -1.37
SORT1-202ENST00000466471 ST18O60284 1047 aa6.47□□□□□ -1.37
SORT1-202ENST00000466471 HAP1P54257 671 aaPredicted RBP6.47□□□□□ -1.37
SORT1-202ENST00000466471 ZNF467Q7Z7K2 595 aaPredicted RBP6.47□□□□□ -1.37
SORT1-202ENST00000466471 GOLGA2Q08379 1002 aa6.46□□□□□ -1.38
SORT1-202ENST00000466471 CHRM1P11229 460 aaPredicted RBP6.45□□□□□ -1.38
SORT1-202ENST00000466471 PSEN1P49768 467 aa6.45□□□□□ -1.38
SORT1-202ENST00000466471 CDAN1Q8IWY9 1227 aa6.45□□□□□ -1.38
SORT1-202ENST00000466471 MRC2Q9UBG0 1479 aa6.45□□□□□ -1.38
SORT1-202ENST00000466471 MKRN3Q13064 507 aaKnown RBP6.44□□□□□ -1.38
SORT1-202ENST00000466471 IFNLR1Q8IU57 520 aaPredicted RBP6.44□□□□□ -1.38
SORT1-202ENST00000466471 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.44□□□□□ -1.38
SORT1-202ENST00000466471 CIZ1Q9ULV3 898 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms