RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 KLHL34Q8N239 644 aa17.87■□□□□ 0.45
SSB-207ENST00000465871 GALR2O43603 387 aaPredicted RBP17.82■□□□□ 0.44
SSB-207ENST00000465871 FAM212AQ96EL1 285 aa17.82■□□□□ 0.44
SSB-207ENST00000465871 IFNLR1Q8IU57 520 aaPredicted RBP17.79■□□□□ 0.44
SSB-207ENST00000465871 KIF12Q96FN5 646 aa17.74■□□□□ 0.43
SSB-207ENST00000465871 MS4A3Q96HJ5 214 aa17.74■□□□□ 0.43
SSB-207ENST00000465871 DCBLD2Q96PD2 775 aa17.72■□□□□ 0.43
SSB-207ENST00000465871 POTEIP0CG38 1075 aa17.7■□□□□ 0.42
SSB-207ENST00000465871 DCAF8Q5TAQ9 597 aa17.68■□□□□ 0.42
SSB-207ENST00000465871 SPOCK2Q92563 424 aa17.67■□□□□ 0.42
SSB-207ENST00000465871 MAP3K13O43283 966 aa17.66■□□□□ 0.42
SSB-207ENST00000465871 GSE1Q14687 1217 aa17.62■□□□□ 0.41
SSB-207ENST00000465871 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
SSB-207ENST00000465871 PCDHB13Q9Y5F0 798 aa17.57■□□□□ 0.4
SSB-207ENST00000465871 PYGBP11216 843 aa17.54■□□□□ 0.4
SSB-207ENST00000465871 ASTLQ6HA08 431 aaPredicted RBP17.51■□□□□ 0.39
SSB-207ENST00000465871 TRPC6Q9Y210 931 aa17.49■□□□□ 0.39
SSB-207ENST00000465871 IFNL1Q8IU54 200 aa17.48■□□□□ 0.39
SSB-207ENST00000465871 ATMINO43313 823 aaPredicted RBP17.47■□□□□ 0.39
SSB-207ENST00000465871 TIE1P35590 1138 aa17.46■□□□□ 0.39
SSB-207ENST00000465871 CIZ1Q9ULV3 898 aaPredicted RBP17.46■□□□□ 0.39
SSB-207ENST00000465871 BMP2KQ9NSY1 1161 aaPredicted RBP17.44■□□□□ 0.38
SSB-207ENST00000465871 CHRM1P11229 460 aaPredicted RBP17.41■□□□□ 0.38
SSB-207ENST00000465871 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
SSB-207ENST00000465871 ATN1P54259 1190 aaPredicted RBP17.39■□□□□ 0.37
SSB-207ENST00000465871 TTLL13PA6NNM8 815 aa17.36■□□□□ 0.37
SSB-207ENST00000465871 PCDHB8Q9UN66 801 aa17.34■□□□□ 0.37
SSB-207ENST00000465871 LHX8Q68G74 356 aa17.33■□□□□ 0.36
SSB-207ENST00000465871 ZNF467Q7Z7K2 595 aaPredicted RBP17.33■□□□□ 0.36
SSB-207ENST00000465871 SLC39A7Q92504 469 aa17.33■□□□□ 0.36
SSB-207ENST00000465871 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
SSB-207ENST00000465871 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
SSB-207ENST00000465871 METRNQ9UJH8 293 aa17.29■□□□□ 0.36
SSB-207ENST00000465871 C7P10643 843 aa17.28■□□□□ 0.36
SSB-207ENST00000465871 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
SSB-207ENST00000465871 IER5LQ5T953 404 aa17.16■□□□□ 0.34
SSB-207ENST00000465871 PSEN1P49768 467 aa17.14■□□□□ 0.33
SSB-207ENST00000465871 PDAP1Q13442 181 aaKnown RBP17.14■□□□□ 0.33
SSB-207ENST00000465871 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
SSB-207ENST00000465871 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
SSB-207ENST00000465871 SEC24BO95487 1268 aa17.07■□□□□ 0.32
SSB-207ENST00000465871 RNF25Q96BH1 459 aaPredicted RBP17.06■□□□□ 0.32
SSB-207ENST00000465871 COLQQ9Y215 455 aaPredicted RBP17.05■□□□□ 0.32
SSB-207ENST00000465871 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
SSB-207ENST00000465871 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
SSB-207ENST00000465871 PKD2Q13563 968 aa17.01■□□□□ 0.31
SSB-207ENST00000465871 ECM2O94769 699 aaPredicted RBP17■□□□□ 0.31
SSB-207ENST00000465871 IRX5P78411 483 aaPredicted RBP17■□□□□ 0.31
SSB-207ENST00000465871 PLCG2P16885 1265 aa16.98■□□□□ 0.31
SSB-207ENST00000465871 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
SSB-207ENST00000465871 OTUD5Q96G74 571 aa16.97■□□□□ 0.31
SSB-207ENST00000465871 MKRN3Q13064 507 aaKnown RBP16.96■□□□□ 0.31
SSB-207ENST00000465871 VGFO15240 615 aaPredicted RBP16.94■□□□□ 0.3
SSB-207ENST00000465871 OCEL1Q9H607 264 aa16.93■□□□□ 0.3
SSB-207ENST00000465871 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
SSB-207ENST00000465871 MAMSTRQ6ZN01 415 aa16.92■□□□□ 0.3
SSB-207ENST00000465871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.88■□□□□ 0.29
SSB-207ENST00000465871 ZFP91Q96JP5 570 aaPredicted RBP16.88■□□□□ 0.29
SSB-207ENST00000465871 TAOK2Q9UL54 1235 aa16.88■□□□□ 0.29
SSB-207ENST00000465871 SCUBE2Q9NQ36 999 aa16.87■□□□□ 0.29
SSB-207ENST00000465871 RGL2O15211 777 aa16.84■□□□□ 0.29
SSB-207ENST00000465871 PDCD7Q8N8D1 485 aaKnown RBP16.84■□□□□ 0.29
SSB-207ENST00000465871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.84■□□□□ 0.293e-10■■■□□ 15.2
SSB-207ENST00000465871 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
SSB-207ENST00000465871 EFCAB3Q8N7B9 438 aa16.79■□□□□ 0.28
SSB-207ENST00000465871 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
SSB-207ENST00000465871 STK25O00506 426 aa16.7■□□□□ 0.26
SSB-207ENST00000465871 STK24Q9Y6E0 443 aa16.7■□□□□ 0.26
SSB-207ENST00000465871 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
SSB-207ENST00000465871 SOX12O15370 315 aa16.68■□□□□ 0.26
SSB-207ENST00000465871 DPY19L2Q6NUT2 758 aa16.65■□□□□ 0.26
SSB-207ENST00000465871 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
SSB-207ENST00000465871 SLAIN1Q8ND83 568 aa16.6■□□□□ 0.25
SSB-207ENST00000465871 PHF8Q9UPP1 1060 aa16.6■□□□□ 0.25
SSB-207ENST00000465871 C3orf67Q6ZVT6 689 aa16.59■□□□□ 0.25
SSB-207ENST00000465871 BOLA1Q9Y3E2 137 aa16.57■□□□□ 0.24
SSB-207ENST00000465871 G3V3G9 751 aa16.56■□□□□ 0.24
SSB-207ENST00000465871 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
SSB-207ENST00000465871 NLRP6P59044 892 aa16.54■□□□□ 0.24
SSB-207ENST00000465871 HS6ST3Q8IZP7 471 aa16.52■□□□□ 0.24
SSB-207ENST00000465871 FBXO22Q8NEZ5 403 aa16.51■□□□□ 0.23
SSB-207ENST00000465871 MFRPQ9BY79 579 aa16.51■□□□□ 0.23
SSB-207ENST00000465871 TMEM121BQ9BXQ6 578 aaPredicted RBP16.48■□□□□ 0.23
SSB-207ENST00000465871 CHGAP10645 457 aaKnown RBP16.45■□□□□ 0.22
SSB-207ENST00000465871 MICALL2Q8IY33 904 aa16.44■□□□□ 0.22
SSB-207ENST00000465871 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
SSB-207ENST00000465871 LCE2DQ5TA82 110 aaPredicted RBP16.38■□□□□ 0.21
SSB-207ENST00000465871 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
SSB-207ENST00000465871 SNPHO15079 494 aa16.35■□□□□ 0.21
SSB-207ENST00000465871 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
SSB-207ENST00000465871 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
SSB-207ENST00000465871 POTEMA6NI47 508 aa16.29■□□□□ 0.2
SSB-207ENST00000465871 ST18O60284 1047 aa16.27■□□□□ 0.2
SSB-207ENST00000465871 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
SSB-207ENST00000465871 POTEGQ6S5H5 508 aa16.27■□□□□ 0.2
SSB-207ENST00000465871 TMEM92Q6UXU6 159 aa16.27■□□□□ 0.2
SSB-207ENST00000465871 RTN4Q9NQC3 1192 aaKnown RBP16.24■□□□□ 0.19
SSB-207ENST00000465871 PPP1R37O75864 691 aa16.22■□□□□ 0.19
SSB-207ENST00000465871 RYDENQ9NUL5 291 aaKnown RBP16.2■□□□□ 0.18
SSB-207ENST00000465871 HOXB3P14651 431 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms