RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 OTUD5Q96G74 571 aa15.05■□□□□ -0
SPTA1-203ENST00000465741 IFNLR1Q8IU57 520 aaPredicted RBP15.02■□□□□ -0
SPTA1-203ENST00000465741 MS4A3Q96HJ5 214 aa14.98□□□□□ -0.01
SPTA1-203ENST00000465741 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
SPTA1-203ENST00000465741 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
SPTA1-203ENST00000465741 ASTLQ6HA08 431 aaPredicted RBP14.92□□□□□ -0.02
SPTA1-203ENST00000465741 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
SPTA1-203ENST00000465741 ATMINO43313 823 aaPredicted RBP14.89□□□□□ -0.03
SPTA1-203ENST00000465741 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
SPTA1-203ENST00000465741 MIER1Q8N108 512 aa14.88□□□□□ -0.03
SPTA1-203ENST00000465741 POTEJP0CG39 1038 aa14.86□□□□□ -0.03
SPTA1-203ENST00000465741 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
SPTA1-203ENST00000465741 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
SPTA1-203ENST00000465741 SPOCK2Q92563 424 aa14.85□□□□□ -0.03
SPTA1-203ENST00000465741 METRNQ9UJH8 293 aa14.84□□□□□ -0.03
SPTA1-203ENST00000465741 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
SPTA1-203ENST00000465741 PLSCR2Q9NRY7 297 aa14.79□□□□□ -0.04
SPTA1-203ENST00000465741 SLC39A7Q92504 469 aa14.77□□□□□ -0.05
SPTA1-203ENST00000465741 KIF12Q96FN5 646 aa14.77□□□□□ -0.05
SPTA1-203ENST00000465741 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
SPTA1-203ENST00000465741 TRPC6Q9Y210 931 aa14.76□□□□□ -0.05
SPTA1-203ENST00000465741 C7P10643 843 aa14.75□□□□□ -0.05
SPTA1-203ENST00000465741 RASEFQ8IZ41 740 aa14.72□□□□□ -0.05
SPTA1-203ENST00000465741 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
SPTA1-203ENST00000465741 POTEFA5A3E0 1075 aa14.7□□□□□ -0.06
SPTA1-203ENST00000465741 POTEMA6NI47 508 aa14.7□□□□□ -0.06
SPTA1-203ENST00000465741 PKD2Q13563 968 aa14.69□□□□□ -0.06
SPTA1-203ENST00000465741 BMP2KQ9NSY1 1161 aaPredicted RBP14.69□□□□□ -0.06
SPTA1-203ENST00000465741 MAP3K13O43283 966 aa14.67□□□□□ -0.06
SPTA1-203ENST00000465741 POTEGQ6S5H5 508 aa14.66□□□□□ -0.06
SPTA1-203ENST00000465741 LCE2DQ5TA82 110 aaPredicted RBP14.63□□□□□ -0.07
SPTA1-203ENST00000465741 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
SPTA1-203ENST00000465741 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
SPTA1-203ENST00000465741 TIE1P35590 1138 aa14.58□□□□□ -0.08
SPTA1-203ENST00000465741 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
SPTA1-203ENST00000465741 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
SPTA1-203ENST00000465741 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
SPTA1-203ENST00000465741 COLQQ9Y215 455 aaPredicted RBP14.53□□□□□ -0.08
SPTA1-203ENST00000465741 NUBP1P53384 320 aa14.51□□□□□ -0.09
SPTA1-203ENST00000465741 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
SPTA1-203ENST00000465741 SCUBE2Q9NQ36 999 aa14.49□□□□□ -0.09
SPTA1-203ENST00000465741 GSE1Q14687 1217 aa14.47□□□□□ -0.09
SPTA1-203ENST00000465741 FAM163AQ96GL9 167 aaPredicted RBP14.43□□□□□ -0.1
SPTA1-203ENST00000465741 PCDHB13Q9Y5F0 798 aa14.43□□□□□ -0.1
SPTA1-203ENST00000465741 SGIP1Q9BQI5 828 aa14.42□□□□□ -0.1
SPTA1-203ENST00000465741 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
SPTA1-203ENST00000465741 IFNL1Q8IU54 200 aa14.41□□□□□ -0.1
SPTA1-203ENST00000465741 PCDH10Q9P2E7 1040 aa14.38□□□□□ -0.11
SPTA1-203ENST00000465741 RGL2O15211 777 aa14.37□□□□□ -0.11
SPTA1-203ENST00000465741 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
SPTA1-203ENST00000465741 SEC24BO95487 1268 aa14.36□□□□□ -0.11
SPTA1-203ENST00000465741 IER5LQ5T953 404 aa14.36□□□□□ -0.11
SPTA1-203ENST00000465741 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
SPTA1-203ENST00000465741 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
SPTA1-203ENST00000465741 TMEM106CQ9BVX2 250 aa14.29□□□□□ -0.12
SPTA1-203ENST00000465741 BBXQ8WY36 941 aaPredicted RBP14.27□□□□□ -0.13
SPTA1-203ENST00000465741 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.27□□□□□ -0.13
SPTA1-203ENST00000465741 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
SPTA1-203ENST00000465741 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
SPTA1-203ENST00000465741 CHGAP10645 457 aaKnown RBP14.18□□□□□ -0.14
SPTA1-203ENST00000465741 PYGBP11216 843 aa14.18□□□□□ -0.14
SPTA1-203ENST00000465741 CHRM1P11229 460 aaPredicted RBP14.18□□□□□ -0.14
SPTA1-203ENST00000465741 SLAIN1Q8ND83 568 aa14.18□□□□□ -0.14
SPTA1-203ENST00000465741 RIOK3O14730 519 aaKnown RBP14.16□□□□□ -0.14
SPTA1-203ENST00000465741 PLCG2P16885 1265 aa14.16□□□□□ -0.14
SPTA1-203ENST00000465741 ST18O60284 1047 aa14.15□□□□□ -0.14
SPTA1-203ENST00000465741 HAP1P54257 671 aaPredicted RBP14.14□□□□□ -0.15
SPTA1-203ENST00000465741 RNF25Q96BH1 459 aaPredicted RBP14.14□□□□□ -0.15
SPTA1-203ENST00000465741 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
SPTA1-203ENST00000465741 CDAN1Q8IWY9 1227 aa14.12□□□□□ -0.15
SPTA1-203ENST00000465741 HS6ST3Q8IZP7 471 aa14.11□□□□□ -0.15
SPTA1-203ENST00000465741 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
SPTA1-203ENST00000465741 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
SPTA1-203ENST00000465741 OCEL1Q9H607 264 aa14.08□□□□□ -0.16
SPTA1-203ENST00000465741 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
SPTA1-203ENST00000465741 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
SPTA1-203ENST00000465741 DNAJC5Q9H3Z4 198 aa14.01□□□□□ -0.17
SPTA1-203ENST00000465741 PDCD7Q8N8D1 485 aaKnown RBP14□□□□□ -0.17
SPTA1-203ENST00000465741 STK25O00506 426 aa13.99□□□□□ -0.17
SPTA1-203ENST00000465741 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
SPTA1-203ENST00000465741 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
SPTA1-203ENST00000465741 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
SPTA1-203ENST00000465741 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
SPTA1-203ENST00000465741 ZFP91Q96JP5 570 aaPredicted RBP13.93□□□□□ -0.18
SPTA1-203ENST00000465741 STK24Q9Y6E0 443 aa13.91□□□□□ -0.18
SPTA1-203ENST00000465741 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.18
SPTA1-203ENST00000465741 TMEM121BQ9BXQ6 578 aaPredicted RBP13.89□□□□□ -0.19
SPTA1-203ENST00000465741 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
SPTA1-203ENST00000465741 PDAP1Q13442 181 aaKnown RBP13.85□□□□□ -0.19
SPTA1-203ENST00000465741 RYDENQ9NUL5 291 aaKnown RBP13.85□□□□□ -0.19
SPTA1-203ENST00000465741 SNPHO15079 494 aa13.84□□□□□ -0.19
SPTA1-203ENST00000465741 PSEN1P49768 467 aa13.84□□□□□ -0.19
SPTA1-203ENST00000465741 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.2
SPTA1-203ENST00000465741 ILDR1Q86SU0 546 aaPredicted RBP13.83□□□□□ -0.2
SPTA1-203ENST00000465741 MKRN3Q13064 507 aaKnown RBP13.82□□□□□ -0.2
SPTA1-203ENST00000465741 SPNS2Q8IVW8 549 aa13.81□□□□□ -0.2
SPTA1-203ENST00000465741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.2
SPTA1-203ENST00000465741 MMRN1Q13201 1228 aa13.8□□□□□ -0.2
SPTA1-203ENST00000465741 GOLGA2Q08379 1002 aa13.78□□□□□ -0.2
SPTA1-203ENST00000465741 DPY19L2Q6NUT2 758 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms