RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 METRNQ9UJH8 293 aa11□□□□□ -0.65
CD55-207ENST00000465534 CCDC61Q9Y6R9 512 aa11□□□□□ -0.65
CD55-207ENST00000465534 MIER1Q8N108 512 aa10.99□□□□□ -0.65
CD55-207ENST00000465534 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
CD55-207ENST00000465534 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
CD55-207ENST00000465534 KIF12Q96FN5 646 aa10.96□□□□□ -0.65
CD55-207ENST00000465534 C7P10643 843 aa10.95□□□□□ -0.66
CD55-207ENST00000465534 ATN1P54259 1190 aaPredicted RBP10.93□□□□□ -0.66
CD55-207ENST00000465534 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
CD55-207ENST00000465534 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
CD55-207ENST00000465534 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
CD55-207ENST00000465534 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
CD55-207ENST00000465534 MAP3K13O43283 966 aa10.89□□□□□ -0.67
CD55-207ENST00000465534 BMP2KQ9NSY1 1161 aaPredicted RBP10.88□□□□□ -0.67
CD55-207ENST00000465534 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
CD55-207ENST00000465534 POTEMA6NI47 508 aa10.86□□□□□ -0.67
CD55-207ENST00000465534 MAMSTRQ6ZN01 415 aa10.83□□□□□ -0.68
CD55-207ENST00000465534 TIE1P35590 1138 aa10.82□□□□□ -0.68
CD55-207ENST00000465534 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
CD55-207ENST00000465534 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
CD55-207ENST00000465534 SCUBE2Q9NQ36 999 aa10.79□□□□□ -0.68
CD55-207ENST00000465534 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
CD55-207ENST00000465534 NUBP1P53384 320 aa10.77□□□□□ -0.69
CD55-207ENST00000465534 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
CD55-207ENST00000465534 PCDHB13Q9Y5F0 798 aa10.76□□□□□ -0.69
CD55-207ENST00000465534 FKBP8Q14318 412 aa10.75□□□□□ -0.69
CD55-207ENST00000465534 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
CD55-207ENST00000465534 SEC24BO95487 1268 aa10.73□□□□□ -0.69
CD55-207ENST00000465534 SGIP1Q9BQI5 828 aa10.73□□□□□ -0.69
CD55-207ENST00000465534 FAM163AQ96GL9 167 aaPredicted RBP10.72□□□□□ -0.69
CD55-207ENST00000465534 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
CD55-207ENST00000465534 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
CD55-207ENST00000465534 FAM212AQ96EL1 285 aa10.7□□□□□ -0.7
CD55-207ENST00000465534 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
CD55-207ENST00000465534 IER5LQ5T953 404 aa10.66□□□□□ -0.7
CD55-207ENST00000465534 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
CD55-207ENST00000465534 PCDH10Q9P2E7 1040 aa10.64□□□□□ -0.71
CD55-207ENST00000465534 DCAF8Q5TAQ9 597 aa10.61□□□□□ -0.71
CD55-207ENST00000465534 PYGBP11216 843 aa10.58□□□□□ -0.72
CD55-207ENST00000465534 PLCG2P16885 1265 aa10.56□□□□□ -0.72
CD55-207ENST00000465534 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
CD55-207ENST00000465534 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
CD55-207ENST00000465534 IRX5P78411 483 aaPredicted RBP10.54□□□□□ -0.72
CD55-207ENST00000465534 PCDHB8Q9UN66 801 aa10.53□□□□□ -0.72
CD55-207ENST00000465534 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
CD55-207ENST00000465534 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
CD55-207ENST00000465534 ST18O60284 1047 aa10.46□□□□□ -0.74
CD55-207ENST00000465534 CDAN1Q8IWY9 1227 aa10.45□□□□□ -0.74
CD55-207ENST00000465534 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
CD55-207ENST00000465534 GSE1Q14687 1217 aa10.42□□□□□ -0.74
CD55-207ENST00000465534 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
CD55-207ENST00000465534 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
CD55-207ENST00000465534 GOLGA2Q08379 1002 aa10.36□□□□□ -0.75
CD55-207ENST00000465534 MKRN3Q13064 507 aaKnown RBP10.36□□□□□ -0.75
CD55-207ENST00000465534 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
CD55-207ENST00000465534 CHRM1P11229 460 aaPredicted RBP10.34□□□□□ -0.75
CD55-207ENST00000465534 SNPHO15079 494 aa10.33□□□□□ -0.76
CD55-207ENST00000465534 PSEN1P49768 467 aa10.32□□□□□ -0.76
CD55-207ENST00000465534 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
CD55-207ENST00000465534 TMEM121BQ9BXQ6 578 aaPredicted RBP10.3□□□□□ -0.76
CD55-207ENST00000465534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.761e-7■■■□□ 16.2
CD55-207ENST00000465534 MARVELD3Q96A59 401 aa10.3□□□□□ -0.76
CD55-207ENST00000465534 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
CD55-207ENST00000465534 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
CD55-207ENST00000465534 IFNLR1Q8IU57 520 aaPredicted RBP10.25□□□□□ -0.77
CD55-207ENST00000465534 SPOCK2Q92563 424 aa10.25□□□□□ -0.77
CD55-207ENST00000465534 PDAP1Q13442 181 aaKnown RBP10.24□□□□□ -0.77
CD55-207ENST00000465534 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
CD55-207ENST00000465534 CABP2Q9NPB3 220 aa10.21□□□□□ -0.78
CD55-207ENST00000465534 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
CD55-207ENST00000465534 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
CD55-207ENST00000465534 EMP3P54852 163 aa10.19□□□□□ -0.78
CD55-207ENST00000465534 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
CD55-207ENST00000465534 G3V3G9 751 aa10.14□□□□□ -0.79
CD55-207ENST00000465534 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
CD55-207ENST00000465534 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
CD55-207ENST00000465534 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
CD55-207ENST00000465534 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
CD55-207ENST00000465534 HS3ST6Q96QI5 342 aa10.12□□□□□ -0.79
CD55-207ENST00000465534 HOXB3P14651 431 aaPredicted RBP10.08□□□□□ -0.8
CD55-207ENST00000465534 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
CD55-207ENST00000465534 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
CD55-207ENST00000465534 EFCAB3Q8N7B9 438 aa10.07□□□□□ -0.8
CD55-207ENST00000465534 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
CD55-207ENST00000465534 ZNF710Q8N1W2 664 aa10.04□□□□□ -0.8
CD55-207ENST00000465534 HOXB1P14653 301 aaPredicted RBP10□□□□□ -0.81
CD55-207ENST00000465534 DOK7Q18PE1 504 aa10□□□□□ -0.81
CD55-207ENST00000465534 MICALL2Q8IY33 904 aa9.97□□□□□ -0.81
CD55-207ENST00000465534 ERBB3P21860 1342 aa9.96□□□□□ -0.81
CD55-207ENST00000465534 TMEM92Q6UXU6 159 aa9.96□□□□□ -0.82
CD55-207ENST00000465534 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
CD55-207ENST00000465534 RIOK3O14730 519 aaKnown RBP9.95□□□□□ -0.82
CD55-207ENST00000465534 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.94□□□□□ -0.82
CD55-207ENST00000465534 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
CD55-207ENST00000465534 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
CD55-207ENST00000465534 SOX12O15370 315 aa9.93□□□□□ -0.82
CD55-207ENST00000465534 MS4A4AQ96JQ5 239 aa9.92□□□□□ -0.82
CD55-207ENST00000465534 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
CD55-207ENST00000465534 VGFO15240 615 aaPredicted RBP9.91□□□□□ -0.82
CD55-207ENST00000465534 VARS2Q5ST30 1063 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms