RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
CD55-207ENST00000465534 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
CD55-207ENST00000465534 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
CD55-207ENST00000465534 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
CD55-207ENST00000465534 FOXD1Q16676 465 aa18.08■□□□□ 0.49
CD55-207ENST00000465534 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
CD55-207ENST00000465534 MSH5O43196 834 aa16.95■□□□□ 0.3
CD55-207ENST00000465534 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
CD55-207ENST00000465534 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
CD55-207ENST00000465534 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
CD55-207ENST00000465534 ADRA2BP18089 450 aa16.73■□□□□ 0.27
CD55-207ENST00000465534 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
CD55-207ENST00000465534 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
CD55-207ENST00000465534 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
CD55-207ENST00000465534 PPP4R3CPQ6ZMV5 832 aa14.89□□□□□ -0.03
CD55-207ENST00000465534 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
CD55-207ENST00000465534 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
CD55-207ENST00000465534 CACNB1Q02641 598 aaPredicted RBP14.69□□□□□ -0.06
CD55-207ENST00000465534 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
CD55-207ENST00000465534 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
CD55-207ENST00000465534 RNF39Q9H2S5 420 aa14.46□□□□□ -0.09
CD55-207ENST00000465534 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
CD55-207ENST00000465534 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
CD55-207ENST00000465534 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
CD55-207ENST00000465534 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
CD55-207ENST00000465534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.16
CD55-207ENST00000465534 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
CD55-207ENST00000465534 KCNA4P22459 653 aa13.67□□□□□ -0.22
CD55-207ENST00000465534 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
CD55-207ENST00000465534 CAPN15O75808 1086 aa13.56□□□□□ -0.24
CD55-207ENST00000465534 DSG3P32926 999 aa13.49□□□□□ -0.25
CD55-207ENST00000465534 SLC4A2P04920 1241 aa13.48□□□□□ -0.25
CD55-207ENST00000465534 TRHP20396 242 aaPredicted RBP13.31□□□□□ -0.28
CD55-207ENST00000465534 APLP2Q06481 763 aa13.27□□□□□ -0.29
CD55-207ENST00000465534 ABCB7O75027 752 aa13.24□□□□□ -0.29
CD55-207ENST00000465534 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
CD55-207ENST00000465534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
CD55-207ENST00000465534 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
CD55-207ENST00000465534 POTEHQ6S545 545 aa13.18□□□□□ -0.3
CD55-207ENST00000465534 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
CD55-207ENST00000465534 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
CD55-207ENST00000465534 POLA2Q14181 598 aa12.9□□□□□ -0.34
CD55-207ENST00000465534 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
CD55-207ENST00000465534 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
CD55-207ENST00000465534 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
CD55-207ENST00000465534 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
CD55-207ENST00000465534 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
CD55-207ENST00000465534 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
CD55-207ENST00000465534 ZBTB22O15209 634 aa12.55□□□□□ -0.4
CD55-207ENST00000465534 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
CD55-207ENST00000465534 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
CD55-207ENST00000465534 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
CD55-207ENST00000465534 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
CD55-207ENST00000465534 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
CD55-207ENST00000465534 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
CD55-207ENST00000465534 SP7Q8TDD2 431 aaPredicted RBP12.27□□□□□ -0.45
CD55-207ENST00000465534 FBLN2P98095 1184 aa12.23□□□□□ -0.45
CD55-207ENST00000465534 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.45
CD55-207ENST00000465534 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
CD55-207ENST00000465534 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
CD55-207ENST00000465534 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
CD55-207ENST00000465534 HAX1O00165 279 aa12.17□□□□□ -0.46
CD55-207ENST00000465534 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
CD55-207ENST00000465534 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
CD55-207ENST00000465534 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
CD55-207ENST00000465534 SPDYE1Q8NFV5 336 aaPredicted RBP12.03□□□□□ -0.48
CD55-207ENST00000465534 EVX2Q03828 476 aa12.02□□□□□ -0.49
CD55-207ENST00000465534 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
CD55-207ENST00000465534 PRKAR2AP13861 404 aaKnown RBP12□□□□□ -0.49
CD55-207ENST00000465534 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
CD55-207ENST00000465534 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CD55-207ENST00000465534 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
CD55-207ENST00000465534 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
CD55-207ENST00000465534 PRR29P0C7W0 189 aa11.82□□□□□ -0.52
CD55-207ENST00000465534 GABBR2O75899 941 aa11.72□□□□□ -0.53
CD55-207ENST00000465534 FARP1Q9Y4F1 1045 aaPredicted RBP11.63□□□□□ -0.55
CD55-207ENST00000465534 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
CD55-207ENST00000465534 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
CD55-207ENST00000465534 LHX8Q68G74 356 aa11.51□□□□□ -0.57
CD55-207ENST00000465534 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
CD55-207ENST00000465534 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
CD55-207ENST00000465534 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
CD55-207ENST00000465534 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
CD55-207ENST00000465534 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
CD55-207ENST00000465534 CLCN6P51797 869 aa11.42□□□□□ -0.58
CD55-207ENST00000465534 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
CD55-207ENST00000465534 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
CD55-207ENST00000465534 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
CD55-207ENST00000465534 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.6
CD55-207ENST00000465534 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
CD55-207ENST00000465534 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
CD55-207ENST00000465534 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
CD55-207ENST00000465534 PROM2Q8N271 834 aa11.14□□□□□ -0.63
CD55-207ENST00000465534 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
CD55-207ENST00000465534 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
CD55-207ENST00000465534 MS4A3Q96HJ5 214 aa11.09□□□□□ -0.63
CD55-207ENST00000465534 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
CD55-207ENST00000465534 TSPYL2Q9H2G4 693 aaPredicted RBP11.08□□□□□ -0.64
CD55-207ENST00000465534 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
CD55-207ENST00000465534 ATMINO43313 823 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms