RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 MS4A3Q96HJ5 214 aa5.73□□□□□ -1.49
NUCKS1-202ENST00000464938 METRNQ9UJH8 293 aa5.73□□□□□ -1.49
NUCKS1-202ENST00000464938 PAK3O75914 559 aaPredicted RBP5.71□□□□□ -1.5
NUCKS1-202ENST00000464938 C7P10643 843 aa5.7□□□□□ -1.5
NUCKS1-202ENST00000464938 SLC39A7Q92504 469 aa5.7□□□□□ -1.5
NUCKS1-202ENST00000464938 POTEFA5A3E0 1075 aa5.69□□□□□ -1.5
NUCKS1-202ENST00000464938 SPDYE4A6NLX3 237 aa5.67□□□□□ -1.5
NUCKS1-202ENST00000464938 NPM1P06748 294 aaKnown RBP eCLIP5.67□□□□□ -1.54e-9■□□□□ 11
NUCKS1-202ENST00000464938 ATN1P54259 1190 aaPredicted RBP5.66□□□□□ -1.5
NUCKS1-202ENST00000464938 CCDC61Q9Y6R9 512 aa5.66□□□□□ -1.5
NUCKS1-202ENST00000464938 MAMSTRQ6ZN01 415 aa5.65□□□□□ -1.5
NUCKS1-202ENST00000464938 PROM2Q8N271 834 aa5.62□□□□□ -1.51
NUCKS1-202ENST00000464938 KIF12Q96FN5 646 aa5.62□□□□□ -1.51
NUCKS1-202ENST00000464938 BMP2KQ9NSY1 1161 aaPredicted RBP5.62□□□□□ -1.51
NUCKS1-202ENST00000464938 TRPC6Q9Y210 931 aa5.62□□□□□ -1.51
NUCKS1-202ENST00000464938 SCUBE2Q9NQ36 999 aa5.61□□□□□ -1.51
NUCKS1-202ENST00000464938 FKBP8Q14318 412 aa5.6□□□□□ -1.51
NUCKS1-202ENST00000464938 FAM163AQ96GL9 167 aaPredicted RBP5.6□□□□□ -1.51
NUCKS1-202ENST00000464938 TIE1P35590 1138 aa5.58□□□□□ -1.52
NUCKS1-202ENST00000464938 COLQQ9Y215 455 aaPredicted RBP5.58□□□□□ -1.52
NUCKS1-202ENST00000464938 TSPYL2Q9H2G4 693 aaPredicted RBP5.57□□□□□ -1.52
NUCKS1-202ENST00000464938 MAP3K13O43283 966 aa5.55□□□□□ -1.52
NUCKS1-202ENST00000464938 TTLL13PA6NNM8 815 aa5.54□□□□□ -1.52
NUCKS1-202ENST00000464938 CDAN1Q8IWY9 1227 aa5.54□□□□□ -1.52
NUCKS1-202ENST00000464938 IER5LQ5T953 404 aa5.52□□□□□ -1.53
NUCKS1-202ENST00000464938 RASEFQ8IZ41 740 aa5.52□□□□□ -1.53
NUCKS1-202ENST00000464938 ST18O60284 1047 aa5.5□□□□□ -1.53
NUCKS1-202ENST00000464938 SGIP1Q9BQI5 828 aa5.48□□□□□ -1.53
NUCKS1-202ENST00000464938 TRIM35Q9UPQ4 493 aa5.48□□□□□ -1.53
NUCKS1-202ENST00000464938 SEC24BO95487 1268 aa5.46□□□□□ -1.54
NUCKS1-202ENST00000464938 MMRN1Q13201 1228 aa5.45□□□□□ -1.54
NUCKS1-202ENST00000464938 SPNS2Q8IVW8 549 aa5.45□□□□□ -1.54
NUCKS1-202ENST00000464938 IRX5P78411 483 aaPredicted RBP5.44□□□□□ -1.54
NUCKS1-202ENST00000464938 SLAIN1Q8ND83 568 aa5.44□□□□□ -1.54
NUCKS1-202ENST00000464938 NUBP1P53384 320 aa5.43□□□□□ -1.54
NUCKS1-202ENST00000464938 IFNL1Q8IU54 200 aa5.43□□□□□ -1.54
NUCKS1-202ENST00000464938 PCDHB13Q9Y5F0 798 aa5.43□□□□□ -1.54
NUCKS1-202ENST00000464938 TMEM121BQ9BXQ6 578 aaPredicted RBP5.41□□□□□ -1.54
NUCKS1-202ENST00000464938 MIER1Q8N108 512 aa5.38□□□□□ -1.55
NUCKS1-202ENST00000464938 TMEM106CQ9BVX2 250 aa5.38□□□□□ -1.55
NUCKS1-202ENST00000464938 FBXO3Q9UK99 471 aa5.37□□□□□ -1.55
NUCKS1-202ENST00000464938 PLCG2P16885 1265 aa5.36□□□□□ -1.55
NUCKS1-202ENST00000464938 POTEB3A0JP26 581 aa5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 PLEKHG5O94827 1062 aa5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 AMER1Q5JTC6 1135 aaPredicted RBP5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 POTEBQ6S5H4 581 aa5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 MARVELD3Q96A59 401 aa5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 OCEL1Q9H607 264 aa5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 RTN4Q9NQC3 1192 aaKnown RBP5.35□□□□□ -1.55
NUCKS1-202ENST00000464938 PDCD7Q8N8D1 485 aaKnown RBP5.33□□□□□ -1.56
NUCKS1-202ENST00000464938 SNPHO15079 494 aa5.32□□□□□ -1.56
NUCKS1-202ENST00000464938 VASPP50552 380 aaPredicted RBP5.31□□□□□ -1.56
NUCKS1-202ENST00000464938 PLCD3Q8N3E9 789 aa5.3□□□□□ -1.56
NUCKS1-202ENST00000464938 FAM212AQ96EL1 285 aa5.3□□□□□ -1.56
NUCKS1-202ENST00000464938 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.3□□□□□ -1.56
NUCKS1-202ENST00000464938 ZBTB47Q9UFB7 747 aaPredicted RBP5.29□□□□□ -1.56
NUCKS1-202ENST00000464938 ILDR1Q86SU0 546 aaPredicted RBP5.28□□□□□ -1.56
NUCKS1-202ENST00000464938 HS3ST6Q96QI5 342 aa5.28□□□□□ -1.56
NUCKS1-202ENST00000464938 IFNLR1Q8IU57 520 aaPredicted RBP5.27□□□□□ -1.57
NUCKS1-202ENST00000464938 PCDHB8Q9UN66 801 aa5.27□□□□□ -1.57
NUCKS1-202ENST00000464938 PYGBP11216 843 aa5.26□□□□□ -1.57
NUCKS1-202ENST00000464938 EMP3P54852 163 aa5.26□□□□□ -1.57
NUCKS1-202ENST00000464938 FAM205CA6NFA0 338 aa5.23□□□□□ -1.57
NUCKS1-202ENST00000464938 HOXB3P14651 431 aaPredicted RBP5.23□□□□□ -1.57
NUCKS1-202ENST00000464938 C3orf67Q6ZVT6 689 aa5.22□□□□□ -1.57
NUCKS1-202ENST00000464938 L3MBTL3Q96JM7 780 aaPredicted RBP5.2□□□□□ -1.58
NUCKS1-202ENST00000464938 DCAF8Q5TAQ9 597 aa5.19□□□□□ -1.58
NUCKS1-202ENST00000464938 CHRM1P11229 460 aaPredicted RBP5.17□□□□□ -1.58
NUCKS1-202ENST00000464938 HOXB1P14653 301 aaPredicted RBP5.17□□□□□ -1.58
NUCKS1-202ENST00000464938 DPY19L2Q6NUT2 758 aa5.17□□□□□ -1.58
NUCKS1-202ENST00000464938 ZNF467Q7Z7K2 595 aaPredicted RBP5.17□□□□□ -1.58
NUCKS1-202ENST00000464938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.17□□□□□ -1.583e-14■■■■□ 23.7
NUCKS1-202ENST00000464938 MKRN3Q13064 507 aaKnown RBP5.16□□□□□ -1.58
NUCKS1-202ENST00000464938 PKD2Q13563 968 aa5.16□□□□□ -1.58
NUCKS1-202ENST00000464938 SPOCK2Q92563 424 aa5.16□□□□□ -1.58
NUCKS1-202ENST00000464938 PSEN1P49768 467 aa5.14□□□□□ -1.59
NUCKS1-202ENST00000464938 RNF166Q96A37 237 aaPredicted RBP5.14□□□□□ -1.59
NUCKS1-202ENST00000464938 KLHL34Q8N239 644 aa5.13□□□□□ -1.59
NUCKS1-202ENST00000464938 GOLGA2Q08379 1002 aa5.12□□□□□ -1.59
NUCKS1-202ENST00000464938 BOLA1Q9Y3E2 137 aa5.12□□□□□ -1.59
NUCKS1-202ENST00000464938 GSE1Q14687 1217 aa5.11□□□□□ -1.59
NUCKS1-202ENST00000464938 ERBB3P21860 1342 aa5.1□□□□□ -1.59
NUCKS1-202ENST00000464938 MYT1LQ9UL68 1186 aa5.1□□□□□ -1.59
NUCKS1-202ENST00000464938 PDAP1Q13442 181 aaKnown RBP5.09□□□□□ -1.59
NUCKS1-202ENST00000464938 DOK7Q18PE1 504 aa5.09□□□□□ -1.59
NUCKS1-202ENST00000464938 TMEM92Q6UXU6 159 aa5.09□□□□□ -1.59
NUCKS1-202ENST00000464938 VARS2Q5ST30 1063 aaKnown RBP5.08□□□□□ -1.6
NUCKS1-202ENST00000464938 ZNF687Q8N1G0 1237 aa5.08□□□□□ -1.6
NUCKS1-202ENST00000464938 GPR153Q6NV75 609 aa5.07□□□□□ -1.6
NUCKS1-202ENST00000464938 ZNF710Q8N1W2 664 aa5.07□□□□□ -1.6
NUCKS1-202ENST00000464938 CABP2Q9NPB3 220 aa5.07□□□□□ -1.6
NUCKS1-202ENST00000464938 ZSWIM6Q9HCJ5 1215 aa5.06□□□□□ -1.6
NUCKS1-202ENST00000464938 PTGER2P43116 358 aa5.05□□□□□ -1.6
NUCKS1-202ENST00000464938 ECM2O94769 699 aaPredicted RBP5.04□□□□□ -1.6
NUCKS1-202ENST00000464938 MICALL2Q8IY33 904 aa5.03□□□□□ -1.6
NUCKS1-202ENST00000464938 TRIM41Q8WV44 630 aa5.03□□□□□ -1.6
NUCKS1-202ENST00000464938 RIMBP2O15034 1052 aa5.02□□□□□ -1.61
NUCKS1-202ENST00000464938 RGL2O15211 777 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms