RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
CLSTN1-204ENST00000464286 PHF12Q96QT6 1004 aa11.6□□□□□ -0.55
CLSTN1-204ENST00000464286 TSPYL2Q9H2G4 693 aaPredicted RBP11.58□□□□□ -0.56
CLSTN1-204ENST00000464286 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
CLSTN1-204ENST00000464286 POTEIP0CG38 1075 aa11.55□□□□□ -0.56
CLSTN1-204ENST00000464286 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
CLSTN1-204ENST00000464286 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
CLSTN1-204ENST00000464286 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
CLSTN1-204ENST00000464286 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
CLSTN1-204ENST00000464286 NUBP1P53384 320 aa11.52□□□□□ -0.57
CLSTN1-204ENST00000464286 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
CLSTN1-204ENST00000464286 PCGF6Q9BYE7 350 aa11.49□□□□□ -0.57
CLSTN1-204ENST00000464286 DCBLD2Q96PD2 775 aa11.48□□□□□ -0.57
CLSTN1-204ENST00000464286 MYO15BQ96JP2 1530 aa11.48□□□□□ -0.57
CLSTN1-204ENST00000464286 MS4A3Q96HJ5 214 aa11.45□□□□□ -0.58
CLSTN1-204ENST00000464286 KIF12Q96FN5 646 aa11.44□□□□□ -0.58
CLSTN1-204ENST00000464286 TRIM26Q12899 539 aaPredicted RBP11.41□□□□□ -0.58
CLSTN1-204ENST00000464286 MAP3K13O43283 966 aa11.39□□□□□ -0.59
CLSTN1-204ENST00000464286 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
CLSTN1-204ENST00000464286 FAM212AQ96EL1 285 aa11.38□□□□□ -0.59
CLSTN1-204ENST00000464286 MYT1Q01538 1121 aa11.35□□□□□ -0.59
CLSTN1-204ENST00000464286 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
CLSTN1-204ENST00000464286 IFNLR1Q8IU57 520 aaPredicted RBP11.34□□□□□ -0.59
CLSTN1-204ENST00000464286 ASTLQ6HA08 431 aaPredicted RBP11.33□□□□□ -0.6
CLSTN1-204ENST00000464286 LHX8Q68G74 356 aa11.32□□□□□ -0.6
CLSTN1-204ENST00000464286 TRPC6Q9Y210 931 aa11.32□□□□□ -0.6
CLSTN1-204ENST00000464286 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
CLSTN1-204ENST00000464286 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
CLSTN1-204ENST00000464286 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
CLSTN1-204ENST00000464286 BMP2KQ9NSY1 1161 aaPredicted RBP11.26□□□□□ -0.61
CLSTN1-204ENST00000464286 PYGBP11216 843 aa11.25□□□□□ -0.61
CLSTN1-204ENST00000464286 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
CLSTN1-204ENST00000464286 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
CLSTN1-204ENST00000464286 TIE1P35590 1138 aa11.24□□□□□ -0.61
CLSTN1-204ENST00000464286 GSE1Q14687 1217 aa11.24□□□□□ -0.61
CLSTN1-204ENST00000464286 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
CLSTN1-204ENST00000464286 PPARGC1BQ86YN6 1023 aaKnown RBP11.22□□□□□ -0.61
CLSTN1-204ENST00000464286 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
CLSTN1-204ENST00000464286 ABCC9O60706 1549 aa11.19□□□□□ -0.62
CLSTN1-204ENST00000464286 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
CLSTN1-204ENST00000464286 POTEB2H3BUK9 544 aa11.19□□□□□ -0.62
CLSTN1-204ENST00000464286 METRNQ9UJH8 293 aa11.18□□□□□ -0.62
CLSTN1-204ENST00000464286 C7P10643 843 aa11.17□□□□□ -0.62
CLSTN1-204ENST00000464286 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
CLSTN1-204ENST00000464286 PCDHB8Q9UN66 801 aa11.15□□□□□ -0.62
CLSTN1-204ENST00000464286 DCAF8L2P0C7V8 631 aa11.14□□□□□ -0.63
CLSTN1-204ENST00000464286 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
CLSTN1-204ENST00000464286 POTEFA5A3E0 1075 aa11.11□□□□□ -0.63
CLSTN1-204ENST00000464286 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
CLSTN1-204ENST00000464286 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
CLSTN1-204ENST00000464286 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
CLSTN1-204ENST00000464286 POTEJP0CG39 1038 aa11.07□□□□□ -0.64
CLSTN1-204ENST00000464286 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
CLSTN1-204ENST00000464286 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
CLSTN1-204ENST00000464286 RB1CC1Q8TDY2 1594 aa11.06□□□□□ -0.64
CLSTN1-204ENST00000464286 IER5LQ5T953 404 aa11.04□□□□□ -0.64
CLSTN1-204ENST00000464286 COLQQ9Y215 455 aaPredicted RBP11.04□□□□□ -0.64
CLSTN1-204ENST00000464286 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
CLSTN1-204ENST00000464286 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.65
CLSTN1-204ENST00000464286 SEC24BO95487 1268 aa11□□□□□ -0.65
CLSTN1-204ENST00000464286 PSEN1P49768 467 aa10.99□□□□□ -0.65
CLSTN1-204ENST00000464286 IRX5P78411 483 aaPredicted RBP10.97□□□□□ -0.65
CLSTN1-204ENST00000464286 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
CLSTN1-204ENST00000464286 PDAP1Q13442 181 aaKnown RBP10.95□□□□□ -0.66
CLSTN1-204ENST00000464286 MAMSTRQ6ZN01 415 aa10.94□□□□□ -0.66
CLSTN1-204ENST00000464286 ACIN1Q9UKV3 1341 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-204ENST00000464286 PLCG2P16885 1265 aa10.91□□□□□ -0.66
CLSTN1-204ENST00000464286 OCEL1Q9H607 264 aa10.91□□□□□ -0.66
CLSTN1-204ENST00000464286 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
CLSTN1-204ENST00000464286 SCUBE2Q9NQ36 999 aa10.89□□□□□ -0.67
CLSTN1-204ENST00000464286 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
CLSTN1-204ENST00000464286 MKRN3Q13064 507 aaKnown RBP10.88□□□□□ -0.67
CLSTN1-204ENST00000464286 DNAJC5Q9H3Z4 198 aa10.88□□□□□ -0.67
CLSTN1-204ENST00000464286 RIOK3O14730 519 aaKnown RBP10.85□□□□□ -0.67
CLSTN1-204ENST00000464286 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
CLSTN1-204ENST00000464286 CABP2Q9NPB3 220 aa10.85□□□□□ -0.67
CLSTN1-204ENST00000464286 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
CLSTN1-204ENST00000464286 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
CLSTN1-204ENST00000464286 NACADO15069 1562 aa10.82□□□□□ -0.68
CLSTN1-204ENST00000464286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.82□□□□□ -0.682e-7■■□□□ 12.1
CLSTN1-204ENST00000464286 PKD2Q13563 968 aa10.81□□□□□ -0.68
CLSTN1-204ENST00000464286 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
CLSTN1-204ENST00000464286 WRNQ14191 1432 aaPredicted RBP eCLIP10.81□□□□□ -0.68
CLSTN1-204ENST00000464286 VGFO15240 615 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-204ENST00000464286 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
CLSTN1-204ENST00000464286 DIEXFQ68CQ4 756 aaKnown RBP10.79□□□□□ -0.68
CLSTN1-204ENST00000464286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
CLSTN1-204ENST00000464286 ZFP91Q96JP5 570 aaPredicted RBP10.78□□□□□ -0.68
CLSTN1-204ENST00000464286 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
CLSTN1-204ENST00000464286 EEA1Q15075 1411 aa10.76□□□□□ -0.69
CLSTN1-204ENST00000464286 EFCAB3Q8N7B9 438 aa10.76□□□□□ -0.69
CLSTN1-204ENST00000464286 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
CLSTN1-204ENST00000464286 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
CLSTN1-204ENST00000464286 SLAIN1Q8ND83 568 aa10.74□□□□□ -0.69
CLSTN1-204ENST00000464286 L3MBTL3Q96JM7 780 aaPredicted RBP10.73□□□□□ -0.69
CLSTN1-204ENST00000464286 RGL2O15211 777 aa10.72□□□□□ -0.69
CLSTN1-204ENST00000464286 FAM9AQ8IZU1 332 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-204ENST00000464286 NEUROD1Q13562 356 aa10.71□□□□□ -0.69
CLSTN1-204ENST00000464286 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.71□□□□□ -0.69
CLSTN1-204ENST00000464286 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms