RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-215ENST00000461974 RNF25Q96BH1 459 aaPredicted RBP9.94□□□□□ -0.82
FN1-215ENST00000461974 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
FN1-215ENST00000461974 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
FN1-215ENST00000461974 CHRDL2Q6WN34 429 aa9.93□□□□□ -0.82
FN1-215ENST00000461974 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
FN1-215ENST00000461974 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
FN1-215ENST00000461974 HS6ST3Q8IZP7 471 aa9.91□□□□□ -0.82
FN1-215ENST00000461974 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
FN1-215ENST00000461974 RIOK3O14730 519 aaKnown RBP9.9□□□□□ -0.82
FN1-215ENST00000461974 SGIP1Q9BQI5 828 aa9.89□□□□□ -0.83
FN1-215ENST00000461974 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
FN1-215ENST00000461974 CHGAP10645 457 aaKnown RBP9.85□□□□□ -0.83
FN1-215ENST00000461974 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
FN1-215ENST00000461974 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
FN1-215ENST00000461974 PYGBP11216 843 aa9.8□□□□□ -0.84
FN1-215ENST00000461974 ZNF467Q7Z7K2 595 aaPredicted RBP9.8□□□□□ -0.84
FN1-215ENST00000461974 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
FN1-215ENST00000461974 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
FN1-215ENST00000461974 TSPYL2Q9H2G4 693 aaPredicted RBP9.78□□□□□ -0.84
FN1-215ENST00000461974 HAP1P54257 671 aaPredicted RBP9.77□□□□□ -0.85
FN1-215ENST00000461974 PAXIP1Q6ZW49 1069 aaPredicted RBP9.76□□□□□ -0.85
FN1-215ENST00000461974 VSIG10Q8N0Z9 540 aa9.76□□□□□ -0.85
FN1-215ENST00000461974 STK25O00506 426 aa9.74□□□□□ -0.85
FN1-215ENST00000461974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.73□□□□□ -0.85
FN1-215ENST00000461974 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
FN1-215ENST00000461974 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
FN1-215ENST00000461974 CFAP44Q96MT7 982 aa9.72□□□□□ -0.85
FN1-215ENST00000461974 RYDENQ9NUL5 291 aaKnown RBP9.71□□□□□ -0.86
FN1-215ENST00000461974 PDAP1Q13442 181 aaKnown RBP9.7□□□□□ -0.86
FN1-215ENST00000461974 NKX1-1Q15270 411 aaPredicted RBP9.7□□□□□ -0.86
FN1-215ENST00000461974 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
FN1-215ENST00000461974 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
FN1-215ENST00000461974 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
FN1-215ENST00000461974 GTPBP6O43824 516 aaPredicted RBP9.66□□□□□ -0.86
FN1-215ENST00000461974 CD44P16070 742 aaKnown RBP9.66□□□□□ -0.86
FN1-215ENST00000461974 PCDHB13Q9Y5F0 798 aa9.64□□□□□ -0.87
FN1-215ENST00000461974 C19orf67A6NJJ6 358 aa9.63□□□□□ -0.87
FN1-215ENST00000461974 MAP3K13O43283 966 aa9.62□□□□□ -0.87
FN1-215ENST00000461974 ZRANB1Q9UGI0 708 aa9.62□□□□□ -0.87
FN1-215ENST00000461974 PCDHB8Q9UN66 801 aa9.62□□□□□ -0.87
FN1-215ENST00000461974 PSEN1P49768 467 aa9.61□□□□□ -0.87
FN1-215ENST00000461974 IFNL1Q8IU54 200 aa9.61□□□□□ -0.87
FN1-215ENST00000461974 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
FN1-215ENST00000461974 KDM2AQ9Y2K7 1162 aa9.58□□□□□ -0.88
FN1-215ENST00000461974 CLCN6P51797 869 aa9.56□□□□□ -0.88
FN1-215ENST00000461974 PHF12Q96QT6 1004 aa9.54□□□□□ -0.88
FN1-215ENST00000461974 SOX12O15370 315 aa9.51□□□□□ -0.89
FN1-215ENST00000461974 BCANQ96GW7 911 aa9.51□□□□□ -0.89
FN1-215ENST00000461974 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
FN1-215ENST00000461974 TIE1P35590 1138 aa9.48□□□□□ -0.89
FN1-215ENST00000461974 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
FN1-215ENST00000461974 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
FN1-215ENST00000461974 NLRP6P59044 892 aa9.46□□□□□ -0.9
FN1-215ENST00000461974 FBXO22Q8NEZ5 403 aa9.46□□□□□ -0.9
FN1-215ENST00000461974 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
FN1-215ENST00000461974 TMEM106CQ9BVX2 250 aa9.42□□□□□ -0.9
FN1-215ENST00000461974 HAX1O00165 279 aa9.4□□□□□ -0.9
FN1-215ENST00000461974 ILDR1Q86SU0 546 aaPredicted RBP9.4□□□□□ -0.9
FN1-215ENST00000461974 TRPC6Q9Y210 931 aa9.4□□□□□ -0.9
FN1-215ENST00000461974 TTLL13PA6NNM8 815 aa9.39□□□□□ -0.91
FN1-215ENST00000461974 GOLGA2Q08379 1002 aa9.39□□□□□ -0.91
FN1-215ENST00000461974 PHF8Q9UPP1 1060 aa9.39□□□□□ -0.91
FN1-215ENST00000461974 GALR2O43603 387 aaPredicted RBP9.36□□□□□ -0.91
FN1-215ENST00000461974 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
FN1-215ENST00000461974 MKRN3Q13064 507 aaKnown RBP9.35□□□□□ -0.91
FN1-215ENST00000461974 MS4A4AQ96JQ5 239 aa9.35□□□□□ -0.91
FN1-215ENST00000461974 EVX2Q03828 476 aa9.34□□□□□ -0.91
FN1-215ENST00000461974 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
FN1-215ENST00000461974 PPP1R37O75864 691 aa9.33□□□□□ -0.92
FN1-215ENST00000461974 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
FN1-215ENST00000461974 ASTLQ6HA08 431 aaPredicted RBP9.31□□□□□ -0.92
FN1-215ENST00000461974 TRIM35Q9UPQ4 493 aa9.31□□□□□ -0.92
FN1-215ENST00000461974 IER5LQ5T953 404 aa9.3□□□□□ -0.92
FN1-215ENST00000461974 NBR1Q14596 966 aa9.29□□□□□ -0.92
FN1-215ENST00000461974 WDR70Q9NW82 654 aa9.28□□□□□ -0.92
FN1-215ENST00000461974 ATMINO43313 823 aaPredicted RBP9.27□□□□□ -0.93
FN1-215ENST00000461974 POTEHQ6S545 545 aa9.27□□□□□ -0.93
FN1-215ENST00000461974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.26□□□□□ -0.93
FN1-215ENST00000461974 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
FN1-215ENST00000461974 ATN1P54259 1190 aaPredicted RBP9.24□□□□□ -0.93
FN1-215ENST00000461974 MFSD10Q14728 455 aa9.24□□□□□ -0.93
FN1-215ENST00000461974 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
FN1-215ENST00000461974 NCKAP5LQ9HCH0 1330 aa9.23□□□□□ -0.93
FN1-215ENST00000461974 GABBR2O75899 941 aa9.22□□□□□ -0.93
FN1-215ENST00000461974 PDE4AP27815 886 aa9.22□□□□□ -0.93
FN1-215ENST00000461974 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
FN1-215ENST00000461974 KCNV2Q8TDN2 545 aa9.22□□□□□ -0.93
FN1-215ENST00000461974 OCEL1Q9H607 264 aa9.2□□□□□ -0.94
FN1-215ENST00000461974 E2F4Q16254 413 aa9.19□□□□□ -0.94
FN1-215ENST00000461974 ARHGEF1Q92888 912 aaKnown RBP9.19□□□□□ -0.94
FN1-215ENST00000461974 ARIH1Q9Y4X5 557 aaPredicted RBP9.19□□□□□ -0.94
FN1-215ENST00000461974 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
FN1-215ENST00000461974 MICALL2Q8IY33 904 aa9.16□□□□□ -0.94
FN1-215ENST00000461974 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
FN1-215ENST00000461974 CAMK2BQ13554 666 aa9.15□□□□□ -0.94
FN1-215ENST00000461974 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.94
FN1-215ENST00000461974 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
FN1-215ENST00000461974 SLC39A7Q92504 469 aa9.14□□□□□ -0.95
FN1-215ENST00000461974 DCBLD2Q96PD2 775 aa9.14□□□□□ -0.95
FN1-215ENST00000461974 PLCG2P16885 1265 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms