RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
EPB41-208ENST00000460378 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
EPB41-208ENST00000460378 TRIM52Q96A61 297 aa14.67□□□□□ -0.06
EPB41-208ENST00000460378 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
EPB41-208ENST00000460378 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
EPB41-208ENST00000460378 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
EPB41-208ENST00000460378 GOLGA3Q08378 1498 aa14.64□□□□□ -0.07
EPB41-208ENST00000460378 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
EPB41-208ENST00000460378 CLIP1P30622 1438 aa14.63□□□□□ -0.07
EPB41-208ENST00000460378 EEA1Q15075 1411 aa14.63□□□□□ -0.07
EPB41-208ENST00000460378 CFDP1Q9UEE9 299 aaPredicted RBP14.62□□□□□ -0.07
EPB41-208ENST00000460378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.073e-7■■■■□ 23.3
EPB41-208ENST00000460378 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
EPB41-208ENST00000460378 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
EPB41-208ENST00000460378 POLA1P09884 1462 aaPredicted RBP14.59□□□□□ -0.07
EPB41-208ENST00000460378 SYNJ2O15056 1496 aa14.58□□□□□ -0.07
EPB41-208ENST00000460378 HDGFP51858 240 aaKnown RBP14.57□□□□□ -0.08
EPB41-208ENST00000460378 URB2Q14146 1524 aaKnown RBP14.54□□□□□ -0.08
EPB41-208ENST00000460378 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
EPB41-208ENST00000460378 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
EPB41-208ENST00000460378 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
EPB41-208ENST00000460378 RAPGEF2Q9Y4G8 1499 aa14.51□□□□□ -0.09
EPB41-208ENST00000460378 GGT6Q6P531 493 aa14.51□□□□□ -0.09
EPB41-208ENST00000460378 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
EPB41-208ENST00000460378 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
EPB41-208ENST00000460378 WDR62O43379 1518 aa14.49□□□□□ -0.09
EPB41-208ENST00000460378 POGZQ7Z3K3 1410 aa14.48□□□□□ -0.09
EPB41-208ENST00000460378 PPARGC1BQ86YN6 1023 aaKnown RBP14.47□□□□□ -0.09
EPB41-208ENST00000460378 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
EPB41-208ENST00000460378 ZNF326Q5BKZ1 582 aaKnown RBP14.46□□□□□ -0.09
EPB41-208ENST00000460378 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
EPB41-208ENST00000460378 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
EPB41-208ENST00000460378 EID1Q9Y6B2 187 aa14.42□□□□□ -0.1
EPB41-208ENST00000460378 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
EPB41-208ENST00000460378 KANK1Q14678 1352 aa14.42□□□□□ -0.1
EPB41-208ENST00000460378 LOC105371045A0A1W2PR82 267 aa14.4□□□□□ -0.1
EPB41-208ENST00000460378 SPAG9O60271 1321 aaKnown RBP14.39□□□□□ -0.11
EPB41-208ENST00000460378 GRIN2AQ12879 1464 aa14.37□□□□□ -0.11
EPB41-208ENST00000460378 IGF1RP08069 1367 aa14.37□□□□□ -0.11
EPB41-208ENST00000460378 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
EPB41-208ENST00000460378 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
EPB41-208ENST00000460378 TEX14Q8IWB6 1497 aa14.33□□□□□ -0.12
EPB41-208ENST00000460378 ABCA10Q8WWZ4 1543 aa14.33□□□□□ -0.12
EPB41-208ENST00000460378 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
EPB41-208ENST00000460378 UACAQ9BZF9 1416 aa14.32□□□□□ -0.12
EPB41-208ENST00000460378 PLB1Q6P1J6 1458 aa14.32□□□□□ -0.12
EPB41-208ENST00000460378 A0A0G2JS52 829 aa14.31□□□□□ -0.12
EPB41-208ENST00000460378 MYT1Q01538 1121 aa14.31□□□□□ -0.12
EPB41-208ENST00000460378 FOXD1Q16676 465 aa14.31□□□□□ -0.12
EPB41-208ENST00000460378 WASHC2CQ9Y4E1 1318 aa14.3□□□□□ -0.12
EPB41-208ENST00000460378 RSPH4AQ5TD94 716 aa14.29□□□□□ -0.12
EPB41-208ENST00000460378 CUX1P39880 1505 aa14.29□□□□□ -0.12
EPB41-208ENST00000460378 KIF3BO15066 747 aa14.28□□□□□ -0.12
EPB41-208ENST00000460378 CD109Q6YHK3 1445 aa14.28□□□□□ -0.12
EPB41-208ENST00000460378 MEX3CQ5U5Q3 659 aaKnown RBP14.28□□□□□ -0.12
EPB41-208ENST00000460378 ARHGEF11O15085 1522 aa14.26□□□□□ -0.13
EPB41-208ENST00000460378 POLR3GLQ9BT43 218 aa14.25□□□□□ -0.13
EPB41-208ENST00000460378 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
EPB41-208ENST00000460378 THOC2Q8NI27 1593 aaKnown RBP14.21□□□□□ -0.13
EPB41-208ENST00000460378 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
EPB41-208ENST00000460378 ERICH3Q5RHP9 1530 aa14.21□□□□□ -0.13
EPB41-208ENST00000460378 LMOD2Q6P5Q4 547 aa14.21□□□□□ -0.14
EPB41-208ENST00000460378 RAPGEF3O95398 923 aa14.2□□□□□ -0.14
EPB41-208ENST00000460378 FHOD3Q2V2M9 1422 aa14.2□□□□□ -0.14
EPB41-208ENST00000460378 HNRNPMP52272 730 aaKnown RBP eCLIP14.19□□□□□ -0.14
EPB41-208ENST00000460378 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
EPB41-208ENST00000460378 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
EPB41-208ENST00000460378 PCGF6Q9BYE7 350 aa14.16□□□□□ -0.14
EPB41-208ENST00000460378 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
EPB41-208ENST00000460378 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.14
EPB41-208ENST00000460378 PHLDB1Q86UU1 1377 aa14.14□□□□□ -0.15
EPB41-208ENST00000460378 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
EPB41-208ENST00000460378 AKNAQ7Z591 1439 aa14.14□□□□□ -0.15
EPB41-208ENST00000460378 THEMISQ8N1K5 641 aaPredicted RBP14.14□□□□□ -0.15
EPB41-208ENST00000460378 TOP2BQ02880 1626 aa14.13□□□□□ -0.15
EPB41-208ENST00000460378 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
EPB41-208ENST00000460378 ASXL2Q76L83 1435 aa14.12□□□□□ -0.15
EPB41-208ENST00000460378 ZBTB7CA1YPR0 619 aa14.11□□□□□ -0.15
EPB41-208ENST00000460378 CCDC9Q9Y3X0 531 aaKnown RBP14.11□□□□□ -0.15
EPB41-208ENST00000460378 ANKLE2Q86XL3 938 aa14.1□□□□□ -0.15
EPB41-208ENST00000460378 WDR97A6NE52 1622 aa14.08□□□□□ -0.16
EPB41-208ENST00000460378 IQGAP2Q13576 1575 aa14.07□□□□□ -0.16
EPB41-208ENST00000460378 POGKQ9P215 609 aa14.07□□□□□ -0.16
EPB41-208ENST00000460378 UBAP1LF5GYI3 381 aa14.07□□□□□ -0.16
EPB41-208ENST00000460378 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
EPB41-208ENST00000460378 TOM1O60784 492 aa14.06□□□□□ -0.16
EPB41-208ENST00000460378 SCAPERQ9BY12 1400 aa14.06□□□□□ -0.16
EPB41-208ENST00000460378 ATF3P18847 181 aa14.05□□□□□ -0.16
EPB41-208ENST00000460378 DENND4BO75064 1496 aaPredicted RBP14.05□□□□□ -0.16
EPB41-208ENST00000460378 AFAP1Q8N556 730 aa14.04□□□□□ -0.16
EPB41-208ENST00000460378 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
EPB41-208ENST00000460378 CUL7Q14999 1698 aa14.04□□□□□ -0.16
EPB41-208ENST00000460378 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
EPB41-208ENST00000460378 PROSER2Q86WR7 435 aaPredicted RBP14.01□□□□□ -0.17
EPB41-208ENST00000460378 ANKRD30AQ9BXX3 1397 aa14.01□□□□□ -0.17
EPB41-208ENST00000460378 SLC24A1O60721 1099 aa14□□□□□ -0.17
EPB41-208ENST00000460378 NUP160Q12769 1436 aa14□□□□□ -0.17
EPB41-208ENST00000460378 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
EPB41-208ENST00000460378 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
EPB41-208ENST00000460378 NEUROD1Q13562 356 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms