RNA–Protein interactions for RNA: ENST00000460004.1

USP34-206, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-206ENST00000460004 PLEKHG5O94827 1062 aa13.52□□□□□ -0.25
USP34-206ENST00000460004 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
USP34-206ENST00000460004 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
USP34-206ENST00000460004 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
USP34-206ENST00000460004 CLCN6P51797 869 aa13.46□□□□□ -0.25
USP34-206ENST00000460004 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
USP34-206ENST00000460004 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
USP34-206ENST00000460004 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
USP34-206ENST00000460004 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
USP34-206ENST00000460004 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
USP34-206ENST00000460004 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
USP34-206ENST00000460004 CCDC61Q9Y6R9 512 aa13.35□□□□□ -0.27
USP34-206ENST00000460004 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
USP34-206ENST00000460004 MS4A3Q96HJ5 214 aa13.32□□□□□ -0.28
USP34-206ENST00000460004 NUBP1P53384 320 aa13.3□□□□□ -0.28
USP34-206ENST00000460004 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.29
USP34-206ENST00000460004 VASPP50552 380 aaPredicted RBP13.26□□□□□ -0.29
USP34-206ENST00000460004 KIF12Q96FN5 646 aa13.25□□□□□ -0.29
USP34-206ENST00000460004 LHX8Q68G74 356 aa13.24□□□□□ -0.29
USP34-206ENST00000460004 MAP3K13O43283 966 aa13.21□□□□□ -0.29
USP34-206ENST00000460004 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
USP34-206ENST00000460004 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
USP34-206ENST00000460004 FAM212AQ96EL1 285 aa13.18□□□□□ -0.3
USP34-206ENST00000460004 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
USP34-206ENST00000460004 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
USP34-206ENST00000460004 ATMINO43313 823 aaPredicted RBP13.14□□□□□ -0.31
USP34-206ENST00000460004 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
USP34-206ENST00000460004 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
USP34-206ENST00000460004 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
USP34-206ENST00000460004 PCDHB13Q9Y5F0 798 aa13.1□□□□□ -0.31
USP34-206ENST00000460004 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
USP34-206ENST00000460004 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
USP34-206ENST00000460004 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
USP34-206ENST00000460004 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
USP34-206ENST00000460004 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
USP34-206ENST00000460004 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
USP34-206ENST00000460004 PYGBP11216 843 aa13.05□□□□□ -0.32
USP34-206ENST00000460004 MROH2BQ7Z745 1585 aa13.05□□□□□ -0.32
USP34-206ENST00000460004 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
USP34-206ENST00000460004 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
USP34-206ENST00000460004 TIE1P35590 1138 aa13.03□□□□□ -0.32
USP34-206ENST00000460004 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
USP34-206ENST00000460004 METRNQ9UJH8 293 aa13.03□□□□□ -0.32
USP34-206ENST00000460004 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
USP34-206ENST00000460004 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
USP34-206ENST00000460004 C7P10643 843 aa12.98□□□□□ -0.33
USP34-206ENST00000460004 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
USP34-206ENST00000460004 GSE1Q14687 1217 aa12.96□□□□□ -0.33
USP34-206ENST00000460004 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
USP34-206ENST00000460004 WIZO95785 1651 aa12.95□□□□□ -0.34
USP34-206ENST00000460004 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
USP34-206ENST00000460004 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
USP34-206ENST00000460004 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
USP34-206ENST00000460004 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
USP34-206ENST00000460004 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
USP34-206ENST00000460004 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
USP34-206ENST00000460004 POTEFA5A3E0 1075 aa12.9□□□□□ -0.34
USP34-206ENST00000460004 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
USP34-206ENST00000460004 TOP2AP11388 1531 aaKnown RBP12.89□□□□□ -0.35
USP34-206ENST00000460004 POTEJP0CG39 1038 aa12.88□□□□□ -0.35
USP34-206ENST00000460004 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
USP34-206ENST00000460004 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
USP34-206ENST00000460004 SEC24BO95487 1268 aa12.82□□□□□ -0.36
USP34-206ENST00000460004 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
USP34-206ENST00000460004 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
USP34-206ENST00000460004 BAZ1BQ9UIG0 1483 aaKnown RBP12.8□□□□□ -0.36
USP34-206ENST00000460004 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
USP34-206ENST00000460004 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
USP34-206ENST00000460004 IER5LQ5T953 404 aa12.78□□□□□ -0.36
USP34-206ENST00000460004 PSEN1P49768 467 aa12.73□□□□□ -0.37
USP34-206ENST00000460004 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
USP34-206ENST00000460004 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
USP34-206ENST00000460004 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
USP34-206ENST00000460004 PLCG2P16885 1265 aa12.7□□□□□ -0.38
USP34-206ENST00000460004 IRX5P78411 483 aaPredicted RBP12.7□□□□□ -0.38
USP34-206ENST00000460004 CCDC88BA6NC98 1476 aa12.69□□□□□ -0.38
USP34-206ENST00000460004 PDAP1Q13442 181 aaKnown RBP12.67□□□□□ -0.38
USP34-206ENST00000460004 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
USP34-206ENST00000460004 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
USP34-206ENST00000460004 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
USP34-206ENST00000460004 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
USP34-206ENST00000460004 CABP2Q9NPB3 220 aa12.59□□□□□ -0.39
USP34-206ENST00000460004 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
USP34-206ENST00000460004 PDCD7Q8N8D1 485 aaKnown RBP12.56□□□□□ -0.4
USP34-206ENST00000460004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.41e-14■■■□□ 15.5
USP34-206ENST00000460004 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
USP34-206ENST00000460004 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
USP34-206ENST00000460004 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
USP34-206ENST00000460004 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
USP34-206ENST00000460004 CFTRP13569 1480 aa12.47□□□□□ -0.41
USP34-206ENST00000460004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
USP34-206ENST00000460004 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
USP34-206ENST00000460004 DPY19L2Q6NUT2 758 aa12.47□□□□□ -0.41
USP34-206ENST00000460004 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
USP34-206ENST00000460004 POTEMA6NI47 508 aa12.46□□□□□ -0.41
USP34-206ENST00000460004 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
USP34-206ENST00000460004 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
USP34-206ENST00000460004 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
USP34-206ENST00000460004 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
USP34-206ENST00000460004 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms