RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 EEA1Q15075 1411 aa15.73■□□□□ 0.11
SMARCAD1-204ENST00000457823 WRNQ14191 1432 aaPredicted RBP eCLIP15.73■□□□□ 0.11
SMARCAD1-204ENST00000457823 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
SMARCAD1-204ENST00000457823 RGL3Q3MIN7 710 aa15.72■□□□□ 0.11
SMARCAD1-204ENST00000457823 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
SMARCAD1-204ENST00000457823 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
SMARCAD1-204ENST00000457823 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
SMARCAD1-204ENST00000457823 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
SMARCAD1-204ENST00000457823 CFDP1Q9UEE9 299 aaPredicted RBP15.66■□□□□ 0.1
SMARCAD1-204ENST00000457823 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
SMARCAD1-204ENST00000457823 TNIKQ9UKE5 1360 aa15.64■□□□□ 0.09
SMARCAD1-204ENST00000457823 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
SMARCAD1-204ENST00000457823 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
SMARCAD1-204ENST00000457823 SIN3AQ96ST3 1273 aa15.6■□□□□ 0.09
SMARCAD1-204ENST00000457823 NBR1Q14596 966 aa15.59■□□□□ 0.09
SMARCAD1-204ENST00000457823 ANP32BQ92688 251 aaKnown RBP15.59■□□□□ 0.09
SMARCAD1-204ENST00000457823 PPP1R15AO75807 674 aaPredicted RBP15.56■□□□□ 0.08
SMARCAD1-204ENST00000457823 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
SMARCAD1-204ENST00000457823 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
SMARCAD1-204ENST00000457823 CARD11Q9BXL7 1154 aa15.55■□□□□ 0.08
SMARCAD1-204ENST00000457823 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
SMARCAD1-204ENST00000457823 NACADO15069 1562 aa15.52■□□□□ 0.08
SMARCAD1-204ENST00000457823 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.08
SMARCAD1-204ENST00000457823 KNSTRNQ9Y448 316 aa15.51■□□□□ 0.07
SMARCAD1-204ENST00000457823 ARXQ96QS3 562 aa15.5■□□□□ 0.07
SMARCAD1-204ENST00000457823 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
SMARCAD1-204ENST00000457823 C14orf37Q86TY3 774 aa15.5■□□□□ 0.07
SMARCAD1-204ENST00000457823 ZBTB7CA1YPR0 619 aa15.48■□□□□ 0.07
SMARCAD1-204ENST00000457823 CDCA8Q53HL2 280 aa15.48■□□□□ 0.07
SMARCAD1-204ENST00000457823 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
SMARCAD1-204ENST00000457823 PPM1GO15355 546 aaPredicted RBP15.46■□□□□ 0.07
SMARCAD1-204ENST00000457823 NEUROD2Q15784 382 aa15.45■□□□□ 0.06
SMARCAD1-204ENST00000457823 CFAP53Q96M91 514 aa15.45■□□□□ 0.06
SMARCAD1-204ENST00000457823 SOGA1O94964 1423 aa15.45■□□□□ 0.06
SMARCAD1-204ENST00000457823 A0A0G2JS52 829 aa15.45■□□□□ 0.06
SMARCAD1-204ENST00000457823 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
SMARCAD1-204ENST00000457823 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
SMARCAD1-204ENST00000457823 ARID4BQ4LE39 1312 aaPredicted RBP15.42■□□□□ 0.06
SMARCAD1-204ENST00000457823 BAZ1AQ9NRL2 1556 aaPredicted RBP15.42■□□□□ 0.06
SMARCAD1-204ENST00000457823 TNNT2P45379 298 aaPredicted RBP15.38■□□□□ 0.05
SMARCAD1-204ENST00000457823 DCAF11Q8TEB1 546 aa15.37■□□□□ 0.05
SMARCAD1-204ENST00000457823 CUX2O14529 1486 aa15.37■□□□□ 0.05
SMARCAD1-204ENST00000457823 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
SMARCAD1-204ENST00000457823 POGKQ9P215 609 aa15.36■□□□□ 0.05
SMARCAD1-204ENST00000457823 CC2D1BQ5T0F9 858 aaKnown RBP15.35■□□□□ 0.05
SMARCAD1-204ENST00000457823 KANK4Q5T7N3 995 aaPredicted RBP15.35■□□□□ 0.05
SMARCAD1-204ENST00000457823 BECN1Q14457 450 aa15.33■□□□□ 0.04
SMARCAD1-204ENST00000457823 LAS1LQ9Y4W2 734 aaKnown RBP15.33■□□□□ 0.04
SMARCAD1-204ENST00000457823 ERCC6Q03468 1493 aa15.32■□□□□ 0.04
SMARCAD1-204ENST00000457823 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
SMARCAD1-204ENST00000457823 NUDCQ9Y266 331 aa15.32■□□□□ 0.04
SMARCAD1-204ENST00000457823 TIMELESSQ9UNS1 1208 aa15.31■□□□□ 0.04
SMARCAD1-204ENST00000457823 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
SMARCAD1-204ENST00000457823 FRAT1Q92837 279 aaPredicted RBP15.31■□□□□ 0.04
SMARCAD1-204ENST00000457823 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
SMARCAD1-204ENST00000457823 PPP4R2Q9NY27 417 aa15.3■□□□□ 0.04
SMARCAD1-204ENST00000457823 RGS3P49796 1198 aa15.29■□□□□ 0.04
SMARCAD1-204ENST00000457823 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
SMARCAD1-204ENST00000457823 U2SURPO15042 1029 aaKnown RBP15.28■□□□□ 0.04
SMARCAD1-204ENST00000457823 FOXD1Q16676 465 aa15.28■□□□□ 0.04
SMARCAD1-204ENST00000457823 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
SMARCAD1-204ENST00000457823 TMF1P82094 1093 aa15.27■□□□□ 0.04
SMARCAD1-204ENST00000457823 B4GALNT3Q6L9W6 998 aa15.27■□□□□ 0.03
SMARCAD1-204ENST00000457823 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
SMARCAD1-204ENST00000457823 PKD2Q13563 968 aa15.25■□□□□ 0.03
SMARCAD1-204ENST00000457823 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
SMARCAD1-204ENST00000457823 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
SMARCAD1-204ENST00000457823 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
SMARCAD1-204ENST00000457823 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
SMARCAD1-204ENST00000457823 HSPA5P11021 654 aaKnown RBP15.24■□□□□ 0.03
SMARCAD1-204ENST00000457823 MLECQ14165 292 aa15.22■□□□□ 0.03
SMARCAD1-204ENST00000457823 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
SMARCAD1-204ENST00000457823 SAFB2Q14151 953 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMARCAD1-204ENST00000457823 GGT6Q6P531 493 aa15.21■□□□□ 0.03
SMARCAD1-204ENST00000457823 GOLGA6L22H0YM25 854 aa15.21■□□□□ 0.03
SMARCAD1-204ENST00000457823 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
SMARCAD1-204ENST00000457823 NCLP19338 710 aaKnown RBP15.2■□□□□ 0.02
SMARCAD1-204ENST00000457823 SRPK2P78362 688 aaKnown RBP15.19■□□□□ 0.02
SMARCAD1-204ENST00000457823 CCER2I3L3R5 266 aa15.18■□□□□ 0.02
SMARCAD1-204ENST00000457823 SOX12O15370 315 aa15.18■□□□□ 0.02
SMARCAD1-204ENST00000457823 ANP32EQ9BTT0 268 aa15.18■□□□□ 0.02
SMARCAD1-204ENST00000457823 KANK1Q14678 1352 aa15.17■□□□□ 0.02
SMARCAD1-204ENST00000457823 MPHOSPH9Q99550 1183 aa15.17■□□□□ 0.02
SMARCAD1-204ENST00000457823 MORC1Q86VD1 984 aa15.16■□□□□ 0.02
SMARCAD1-204ENST00000457823 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
SMARCAD1-204ENST00000457823 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
SMARCAD1-204ENST00000457823 CASC1Q6TDU7 716 aa15.15■□□□□ 0.02
SMARCAD1-204ENST00000457823 RAB3GAP2Q9H2M9 1393 aa15.15■□□□□ 0.02
SMARCAD1-204ENST00000457823 TPRNQ4KMQ1 711 aa15.14■□□□□ 0.01
SMARCAD1-204ENST00000457823 STK26Q9P289 416 aa15.14■□□□□ 0.01
SMARCAD1-204ENST00000457823 MS4A1P11836 297 aa15.13■□□□□ 0.01
SMARCAD1-204ENST00000457823 NUP155O75694 1391 aa15.12■□□□□ 0.01
SMARCAD1-204ENST00000457823 PNNQ9H307 717 aaKnown RBP15.12■□□□□ 0.01
SMARCAD1-204ENST00000457823 CHMP4BQ9H444 224 aaKnown RBP15.11■□□□□ 0.01
SMARCAD1-204ENST00000457823 EFCAB2Q5VUJ9 269 aa15.1■□□□□ 0.01
SMARCAD1-204ENST00000457823 HDGFP51858 240 aaKnown RBP15.1■□□□□ 0.01
SMARCAD1-204ENST00000457823 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
SMARCAD1-204ENST00000457823 GLIPR1L2Q4G1C9 344 aa15.09■□□□□ 0.01
SMARCAD1-204ENST00000457823 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
SMARCAD1-204ENST00000457823 L3MBTL2Q969R5 705 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms