RNA–Protein interactions for RNA: ENST00000456208.2

LRRC3B-205, Transcript of leucine rich repeat containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC3B, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3B-205ENST00000456208 METRNQ9UJH8 293 aa13.29□□□□□ -0.28
LRRC3B-205ENST00000456208 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
LRRC3B-205ENST00000456208 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
LRRC3B-205ENST00000456208 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
LRRC3B-205ENST00000456208 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
LRRC3B-205ENST00000456208 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
LRRC3B-205ENST00000456208 PROM2Q8N271 834 aa13.2□□□□□ -0.3
LRRC3B-205ENST00000456208 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
LRRC3B-205ENST00000456208 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
LRRC3B-205ENST00000456208 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
LRRC3B-205ENST00000456208 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
LRRC3B-205ENST00000456208 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
LRRC3B-205ENST00000456208 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
LRRC3B-205ENST00000456208 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
LRRC3B-205ENST00000456208 TIE1P35590 1138 aa13.06□□□□□ -0.32
LRRC3B-205ENST00000456208 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
LRRC3B-205ENST00000456208 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
LRRC3B-205ENST00000456208 MIER1Q8N108 512 aa13.01□□□□□ -0.33
LRRC3B-205ENST00000456208 MAP3K13O43283 966 aa13□□□□□ -0.33
LRRC3B-205ENST00000456208 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
LRRC3B-205ENST00000456208 LCE2DQ5TA82 110 aaPredicted RBP12.98□□□□□ -0.33
LRRC3B-205ENST00000456208 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
LRRC3B-205ENST00000456208 TRPC6Q9Y210 931 aa12.96□□□□□ -0.33
LRRC3B-205ENST00000456208 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
LRRC3B-205ENST00000456208 SEC24BO95487 1268 aa12.94□□□□□ -0.34
LRRC3B-205ENST00000456208 TTLL13PA6NNM8 815 aa12.92□□□□□ -0.34
LRRC3B-205ENST00000456208 IER5LQ5T953 404 aa12.92□□□□□ -0.34
LRRC3B-205ENST00000456208 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
LRRC3B-205ENST00000456208 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
LRRC3B-205ENST00000456208 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
LRRC3B-205ENST00000456208 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
LRRC3B-205ENST00000456208 PCDHB13Q9Y5F0 798 aa12.84□□□□□ -0.35
LRRC3B-205ENST00000456208 NUBP1P53384 320 aa12.77□□□□□ -0.36
LRRC3B-205ENST00000456208 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
LRRC3B-205ENST00000456208 FAM212AQ96EL1 285 aa12.74□□□□□ -0.37
LRRC3B-205ENST00000456208 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
LRRC3B-205ENST00000456208 SLAIN1Q8ND83 568 aa12.73□□□□□ -0.37
LRRC3B-205ENST00000456208 PLCG2P16885 1265 aa12.72□□□□□ -0.37
LRRC3B-205ENST00000456208 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
LRRC3B-205ENST00000456208 ST18O60284 1047 aa12.67□□□□□ -0.38
LRRC3B-205ENST00000456208 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
LRRC3B-205ENST00000456208 OCEL1Q9H607 264 aa12.61□□□□□ -0.39
LRRC3B-205ENST00000456208 TMEM121BQ9BXQ6 578 aaPredicted RBP12.6□□□□□ -0.39
LRRC3B-205ENST00000456208 SNPHO15079 494 aa12.6□□□□□ -0.39
LRRC3B-205ENST00000456208 DCAF8Q5TAQ9 597 aa12.55□□□□□ -0.4
LRRC3B-205ENST00000456208 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
LRRC3B-205ENST00000456208 PYGBP11216 843 aa12.5□□□□□ -0.41
LRRC3B-205ENST00000456208 MMRN1Q13201 1228 aa12.46□□□□□ -0.42
LRRC3B-205ENST00000456208 FKBP8Q14318 412 aa12.46□□□□□ -0.42
LRRC3B-205ENST00000456208 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
LRRC3B-205ENST00000456208 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
LRRC3B-205ENST00000456208 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
LRRC3B-205ENST00000456208 ZNF467Q7Z7K2 595 aaPredicted RBP12.41□□□□□ -0.42
LRRC3B-205ENST00000456208 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
LRRC3B-205ENST00000456208 GSE1Q14687 1217 aa12.39□□□□□ -0.43
LRRC3B-205ENST00000456208 C3orf67Q6ZVT6 689 aa12.39□□□□□ -0.43
LRRC3B-205ENST00000456208 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
LRRC3B-205ENST00000456208 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
LRRC3B-205ENST00000456208 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
LRRC3B-205ENST00000456208 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
LRRC3B-205ENST00000456208 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
LRRC3B-205ENST00000456208 EMP3P54852 163 aa12.32□□□□□ -0.44
LRRC3B-205ENST00000456208 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
LRRC3B-205ENST00000456208 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
LRRC3B-205ENST00000456208 PSEN1P49768 467 aa12.26□□□□□ -0.45
LRRC3B-205ENST00000456208 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
LRRC3B-205ENST00000456208 HS3ST6Q96QI5 342 aa12.23□□□□□ -0.45
LRRC3B-205ENST00000456208 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
LRRC3B-205ENST00000456208 FAM205CA6NFA0 338 aa12.2□□□□□ -0.46
LRRC3B-205ENST00000456208 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
LRRC3B-205ENST00000456208 KRTAP3-3Q9BYR6 98 aa12.2□□□□□ -0.46
LRRC3B-205ENST00000456208 KRTAP3-2Q9BYR7 98 aa12.2□□□□□ -0.46
LRRC3B-205ENST00000456208 G3V3G9 751 aa12.18□□□□□ -0.46
LRRC3B-205ENST00000456208 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
LRRC3B-205ENST00000456208 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
LRRC3B-205ENST00000456208 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
LRRC3B-205ENST00000456208 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
LRRC3B-205ENST00000456208 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
LRRC3B-205ENST00000456208 HOXB3P14651 431 aaPredicted RBP12.09□□□□□ -0.47
LRRC3B-205ENST00000456208 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
LRRC3B-205ENST00000456208 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
LRRC3B-205ENST00000456208 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
LRRC3B-205ENST00000456208 SPOCK2Q92563 424 aa12.05□□□□□ -0.48
LRRC3B-205ENST00000456208 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
LRRC3B-205ENST00000456208 ERBB3P21860 1342 aa12.02□□□□□ -0.49
LRRC3B-205ENST00000456208 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
LRRC3B-205ENST00000456208 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
LRRC3B-205ENST00000456208 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
LRRC3B-205ENST00000456208 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
LRRC3B-205ENST00000456208 RNF166Q96A37 237 aaPredicted RBP11.93□□□□□ -0.5
LRRC3B-205ENST00000456208 VARS2Q5ST30 1063 aaKnown RBP11.9□□□□□ -0.5
LRRC3B-205ENST00000456208 EFCAB3Q8N7B9 438 aa11.9□□□□□ -0.5
LRRC3B-205ENST00000456208 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
LRRC3B-205ENST00000456208 MYT1LQ9UL68 1186 aa11.88□□□□□ -0.51
LRRC3B-205ENST00000456208 PTGER2P43116 358 aa11.86□□□□□ -0.51
LRRC3B-205ENST00000456208 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
LRRC3B-205ENST00000456208 SOX12O15370 315 aa11.84□□□□□ -0.51
LRRC3B-205ENST00000456208 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
LRRC3B-205ENST00000456208 TMEM92Q6UXU6 159 aa11.8□□□□□ -0.52
LRRC3B-205ENST00000456208 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms