RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 DHX37Q8IY37 1157 aaKnown RBP12.51□□□□□ -0.41
HCG18-240ENST00000454269 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
HCG18-240ENST00000454269 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
HCG18-240ENST00000454269 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
HCG18-240ENST00000454269 LOC105371045A0A1W2PR82 267 aa12.49□□□□□ -0.41
HCG18-240ENST00000454269 ATAD2BQ9ULI0 1458 aa12.49□□□□□ -0.41
HCG18-240ENST00000454269 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
HCG18-240ENST00000454269 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
HCG18-240ENST00000454269 MSH5O43196 834 aa12.47□□□□□ -0.41
HCG18-240ENST00000454269 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.41
HCG18-240ENST00000454269 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
HCG18-240ENST00000454269 RBM19Q9Y4C8 960 aaKnown RBP12.45□□□□□ -0.42
HCG18-240ENST00000454269 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
HCG18-240ENST00000454269 NESP48681 1621 aa12.44□□□□□ -0.42
HCG18-240ENST00000454269 FANCIQ9NVI1 1328 aa12.42□□□□□ -0.42
HCG18-240ENST00000454269 HAP1P54257 671 aaPredicted RBP12.41□□□□□ -0.42
HCG18-240ENST00000454269 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
HCG18-240ENST00000454269 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
HCG18-240ENST00000454269 BAZ1AQ9NRL2 1556 aaPredicted RBP12.4□□□□□ -0.42
HCG18-240ENST00000454269 SMARCA2P51531 1590 aa12.39□□□□□ -0.43
HCG18-240ENST00000454269 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
HCG18-240ENST00000454269 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
HCG18-240ENST00000454269 WIZO95785 1651 aa12.37□□□□□ -0.43
HCG18-240ENST00000454269 BAZ1BQ9UIG0 1483 aaKnown RBP12.36□□□□□ -0.43
HCG18-240ENST00000454269 CDK11AQ9UQ88 783 aaPredicted RBP12.36□□□□□ -0.43
HCG18-240ENST00000454269 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.43
HCG18-240ENST00000454269 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
HCG18-240ENST00000454269 BCCIPQ9P287 314 aaKnown RBP eCLIP12.31□□□□□ -0.44
HCG18-240ENST00000454269 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
HCG18-240ENST00000454269 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
HCG18-240ENST00000454269 NAP1L2Q9ULW6 460 aaPredicted RBP12.29□□□□□ -0.44
HCG18-240ENST00000454269 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
HCG18-240ENST00000454269 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
HCG18-240ENST00000454269 HSP90B1P14625 803 aaKnown RBP12.27□□□□□ -0.44
HCG18-240ENST00000454269 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
HCG18-240ENST00000454269 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
HCG18-240ENST00000454269 CDK11BP21127 795 aaKnown RBP12.25□□□□□ -0.45
HCG18-240ENST00000454269 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
HCG18-240ENST00000454269 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
HCG18-240ENST00000454269 BCANQ96GW7 911 aa12.18□□□□□ -0.46
HCG18-240ENST00000454269 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
HCG18-240ENST00000454269 CUX2O14529 1486 aa12.17□□□□□ -0.46
HCG18-240ENST00000454269 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
HCG18-240ENST00000454269 RNF216Q9NWF9 866 aaPredicted RBP12.16□□□□□ -0.46
HCG18-240ENST00000454269 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
HCG18-240ENST00000454269 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.47
HCG18-240ENST00000454269 RRP9O43818 475 aaKnown RBP12.13□□□□□ -0.47
HCG18-240ENST00000454269 TEX2Q8IWB9 1127 aa12.13□□□□□ -0.47
HCG18-240ENST00000454269 FKBP8Q14318 412 aa12.12□□□□□ -0.47
HCG18-240ENST00000454269 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
HCG18-240ENST00000454269 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
HCG18-240ENST00000454269 CHMP4BQ9H444 224 aaKnown RBP12.12□□□□□ -0.47
HCG18-240ENST00000454269 ZFP91Q96JP5 570 aaPredicted RBP12.11□□□□□ -0.47
HCG18-240ENST00000454269 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
HCG18-240ENST00000454269 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
HCG18-240ENST00000454269 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
HCG18-240ENST00000454269 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
HCG18-240ENST00000454269 TOP2AP11388 1531 aaKnown RBP12.07□□□□□ -0.48
HCG18-240ENST00000454269 PRDM4Q9UKN5 801 aa12.05□□□□□ -0.48
HCG18-240ENST00000454269 WASHC2CQ9Y4E1 1318 aa12.05□□□□□ -0.48
HCG18-240ENST00000454269 HSP90AA2PQ14568 343 aaPredicted RBP12.05□□□□□ -0.48
HCG18-240ENST00000454269 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
HCG18-240ENST00000454269 ZNF316A6NFI3 1004 aaPredicted RBP12.04□□□□□ -0.48
HCG18-240ENST00000454269 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
HCG18-240ENST00000454269 MIER1Q8N108 512 aa12.04□□□□□ -0.48
HCG18-240ENST00000454269 PDS5BQ9NTI5 1447 aa12.04□□□□□ -0.48
HCG18-240ENST00000454269 IRX6P78412 446 aaPredicted RBP12.03□□□□□ -0.48
HCG18-240ENST00000454269 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.48
HCG18-240ENST00000454269 CALD1Q05682 793 aaKnown RBP12.02□□□□□ -0.48
HCG18-240ENST00000454269 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
HCG18-240ENST00000454269 STAC3Q96MF2 364 aa12.01□□□□□ -0.49
HCG18-240ENST00000454269 FANCD2Q9BXW9 1451 aa12□□□□□ -0.49
HCG18-240ENST00000454269 MRC2Q9UBG0 1479 aa12□□□□□ -0.49
HCG18-240ENST00000454269 TMEM132AQ24JP5 1023 aa12□□□□□ -0.49
HCG18-240ENST00000454269 WDR62O43379 1518 aa12□□□□□ -0.49
HCG18-240ENST00000454269 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
HCG18-240ENST00000454269 CFTRP13569 1480 aa11.99□□□□□ -0.49
HCG18-240ENST00000454269 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
HCG18-240ENST00000454269 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
HCG18-240ENST00000454269 CNGB1Q14028 1251 aaPredicted RBP11.98□□□□□ -0.49
HCG18-240ENST00000454269 FAM43AQ8N2R8 423 aa11.98□□□□□ -0.49
HCG18-240ENST00000454269 NCLP19338 710 aaKnown RBP11.97□□□□□ -0.49
HCG18-240ENST00000454269 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
HCG18-240ENST00000454269 URB2Q14146 1524 aaKnown RBP11.97□□□□□ -0.49
HCG18-240ENST00000454269 NBR1Q14596 966 aa11.96□□□□□ -0.49
HCG18-240ENST00000454269 NOP58Q9Y2X3 529 aaKnown RBP11.96□□□□□ -0.49
HCG18-240ENST00000454269 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.49
HCG18-240ENST00000454269 ARID4BQ4LE39 1312 aaPredicted RBP11.95□□□□□ -0.5
HCG18-240ENST00000454269 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
HCG18-240ENST00000454269 CNPY4Q8N129 248 aa11.92□□□□□ -0.5
HCG18-240ENST00000454269 CCDC9Q9Y3X0 531 aaKnown RBP11.92□□□□□ -0.5
HCG18-240ENST00000454269 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
HCG18-240ENST00000454269 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
HCG18-240ENST00000454269 POLR3GLQ9BT43 218 aa11.91□□□□□ -0.5
HCG18-240ENST00000454269 TICAM2Q86XR7 235 aa11.9□□□□□ -0.5
HCG18-240ENST00000454269 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
HCG18-240ENST00000454269 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
HCG18-240ENST00000454269 USP35Q9P2H5 1018 aa11.88□□□□□ -0.51
HCG18-240ENST00000454269 IGSF3O75054 1194 aa11.87□□□□□ -0.51
HCG18-240ENST00000454269 HSP90AA1P07900 732 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms