RNA–Protein interactions for RNA: ENST00000453133.1

USP34-204, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 5

Gene USP34, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-204ENST00000453133 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
USP34-204ENST00000453133 PYGBP11216 843 aa13.73□□□□□ -0.21
USP34-204ENST00000453133 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.22
USP34-204ENST00000453133 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
USP34-204ENST00000453133 POTEHQ6S545 545 aa13.67□□□□□ -0.22
USP34-204ENST00000453133 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
USP34-204ENST00000453133 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
USP34-204ENST00000453133 CHRM1P11229 460 aaPredicted RBP13.63□□□□□ -0.23
USP34-204ENST00000453133 RNF25Q96BH1 459 aaPredicted RBP13.63□□□□□ -0.23
USP34-204ENST00000453133 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
USP34-204ENST00000453133 HAX1O00165 279 aa13.59□□□□□ -0.23
USP34-204ENST00000453133 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
USP34-204ENST00000453133 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
USP34-204ENST00000453133 MAP3K13O43283 966 aa13.52□□□□□ -0.25
USP34-204ENST00000453133 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
USP34-204ENST00000453133 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
USP34-204ENST00000453133 PCDHB8Q9UN66 801 aa13.51□□□□□ -0.25
USP34-204ENST00000453133 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
USP34-204ENST00000453133 EVX2Q03828 476 aa13.49□□□□□ -0.25
USP34-204ENST00000453133 VGFO15240 615 aaPredicted RBP13.47□□□□□ -0.25
USP34-204ENST00000453133 ZNF467Q7Z7K2 595 aaPredicted RBP13.47□□□□□ -0.25
USP34-204ENST00000453133 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
USP34-204ENST00000453133 TAOK2Q9UL54 1235 aa13.47□□□□□ -0.25
USP34-204ENST00000453133 IFNL1Q8IU54 200 aa13.45□□□□□ -0.26
USP34-204ENST00000453133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.43□□□□□ -0.26
USP34-204ENST00000453133 ZFP91Q96JP5 570 aaPredicted RBP13.43□□□□□ -0.26
USP34-204ENST00000453133 STK25O00506 426 aa13.41□□□□□ -0.26
USP34-204ENST00000453133 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
USP34-204ENST00000453133 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
USP34-204ENST00000453133 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
USP34-204ENST00000453133 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
USP34-204ENST00000453133 PSEN1P49768 467 aa13.37□□□□□ -0.27
USP34-204ENST00000453133 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
USP34-204ENST00000453133 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
USP34-204ENST00000453133 STK24Q9Y6E0 443 aa13.37□□□□□ -0.27
USP34-204ENST00000453133 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.33□□□□□ -0.28
USP34-204ENST00000453133 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
USP34-204ENST00000453133 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
USP34-204ENST00000453133 PLCB2Q00722 1185 aa13.27□□□□□ -0.29
USP34-204ENST00000453133 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.29
USP34-204ENST00000453133 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
USP34-204ENST00000453133 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
USP34-204ENST00000453133 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
USP34-204ENST00000453133 GABBR2O75899 941 aa13.22□□□□□ -0.29
USP34-204ENST00000453133 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
USP34-204ENST00000453133 CLCN6P51797 869 aa13.22□□□□□ -0.29
USP34-204ENST00000453133 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
USP34-204ENST00000453133 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.3
USP34-204ENST00000453133 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
USP34-204ENST00000453133 TIE1P35590 1138 aa13.17□□□□□ -0.3
USP34-204ENST00000453133 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
USP34-204ENST00000453133 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
USP34-204ENST00000453133 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
USP34-204ENST00000453133 HAP1P54257 671 aaPredicted RBP13.14□□□□□ -0.31
USP34-204ENST00000453133 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
USP34-204ENST00000453133 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
USP34-204ENST00000453133 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
USP34-204ENST00000453133 ATN1P54259 1190 aaPredicted RBP13.08□□□□□ -0.32
USP34-204ENST00000453133 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
USP34-204ENST00000453133 TRIM35Q9UPQ4 493 aa13.08□□□□□ -0.32
USP34-204ENST00000453133 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
USP34-204ENST00000453133 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
USP34-204ENST00000453133 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
USP34-204ENST00000453133 ATMINO43313 823 aaPredicted RBP13.06□□□□□ -0.32
USP34-204ENST00000453133 SOX12O15370 315 aa13.05□□□□□ -0.32
USP34-204ENST00000453133 ASTLQ6HA08 431 aaPredicted RBP13.04□□□□□ -0.32
USP34-204ENST00000453133 RYDENQ9NUL5 291 aaKnown RBP13.04□□□□□ -0.32
USP34-204ENST00000453133 NLRP6P59044 892 aa13.02□□□□□ -0.33
USP34-204ENST00000453133 TSHZ2Q9NRE2 1034 aa13.02□□□□□ -0.33
USP34-204ENST00000453133 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
USP34-204ENST00000453133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.336e-10■■■■□ 21.6
USP34-204ENST00000453133 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
USP34-204ENST00000453133 PPP1R37O75864 691 aa12.95□□□□□ -0.34
USP34-204ENST00000453133 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
USP34-204ENST00000453133 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
USP34-204ENST00000453133 IER5LQ5T953 404 aa12.88□□□□□ -0.35
USP34-204ENST00000453133 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
USP34-204ENST00000453133 IRX5P78411 483 aaPredicted RBP12.88□□□□□ -0.35
USP34-204ENST00000453133 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
USP34-204ENST00000453133 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
USP34-204ENST00000453133 SLC39A7Q92504 469 aa12.86□□□□□ -0.35
USP34-204ENST00000453133 SEC24BO95487 1268 aa12.85□□□□□ -0.35
USP34-204ENST00000453133 PLCG2P16885 1265 aa12.85□□□□□ -0.35
USP34-204ENST00000453133 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
USP34-204ENST00000453133 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
USP34-204ENST00000453133 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
USP34-204ENST00000453133 METRNQ9UJH8 293 aa12.82□□□□□ -0.36
USP34-204ENST00000453133 COLQQ9Y215 455 aaPredicted RBP12.82□□□□□ -0.36
USP34-204ENST00000453133 C7P10643 843 aa12.81□□□□□ -0.36
USP34-204ENST00000453133 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
USP34-204ENST00000453133 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
USP34-204ENST00000453133 G3V3G9 751 aa12.73□□□□□ -0.37
USP34-204ENST00000453133 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
USP34-204ENST00000453133 MICALL2Q8IY33 904 aa12.71□□□□□ -0.37
USP34-204ENST00000453133 L3MBTL3Q96JM7 780 aaPredicted RBP12.7□□□□□ -0.38
USP34-204ENST00000453133 WDR70Q9NW82 654 aa12.65□□□□□ -0.38
USP34-204ENST00000453133 NCKAP5LQ9HCH0 1330 aa12.65□□□□□ -0.38
USP34-204ENST00000453133 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
USP34-204ENST00000453133 PDE4AP27815 886 aa12.63□□□□□ -0.39
USP34-204ENST00000453133 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms