RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
HMGB1P26-201ENST00000452520 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
HMGB1P26-201ENST00000452520 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
HMGB1P26-201ENST00000452520 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
HMGB1P26-201ENST00000452520 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
HMGB1P26-201ENST00000452520 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
HMGB1P26-201ENST00000452520 PYGBP11216 843 aa12.47□□□□□ -0.41
HMGB1P26-201ENST00000452520 RIOK3O14730 519 aaKnown RBP12.46□□□□□ -0.41
HMGB1P26-201ENST00000452520 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.41
HMGB1P26-201ENST00000452520 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
HMGB1P26-201ENST00000452520 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
HMGB1P26-201ENST00000452520 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
HMGB1P26-201ENST00000452520 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
HMGB1P26-201ENST00000452520 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
HMGB1P26-201ENST00000452520 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
HMGB1P26-201ENST00000452520 SGIP1Q9BQI5 828 aa12.34□□□□□ -0.43
HMGB1P26-201ENST00000452520 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
HMGB1P26-201ENST00000452520 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
HMGB1P26-201ENST00000452520 STK25O00506 426 aa12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 CFAP44Q96MT7 982 aa12.3□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
HMGB1P26-201ENST00000452520 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
HMGB1P26-201ENST00000452520 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
HMGB1P26-201ENST00000452520 PCDHB13Q9Y5F0 798 aa12.27□□□□□ -0.45
HMGB1P26-201ENST00000452520 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
HMGB1P26-201ENST00000452520 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
HMGB1P26-201ENST00000452520 MAP3K13O43283 966 aa12.24□□□□□ -0.45
HMGB1P26-201ENST00000452520 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
HMGB1P26-201ENST00000452520 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
HMGB1P26-201ENST00000452520 C19orf67A6NJJ6 358 aa12.23□□□□□ -0.45
HMGB1P26-201ENST00000452520 NKX1-1Q15270 411 aaPredicted RBP12.23□□□□□ -0.45
HMGB1P26-201ENST00000452520 PDAP1Q13442 181 aaKnown RBP12.22□□□□□ -0.45
HMGB1P26-201ENST00000452520 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
HMGB1P26-201ENST00000452520 PSEN1P49768 467 aa12.18□□□□□ -0.46
HMGB1P26-201ENST00000452520 PHF12Q96QT6 1004 aa12.18□□□□□ -0.46
HMGB1P26-201ENST00000452520 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
HMGB1P26-201ENST00000452520 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
HMGB1P26-201ENST00000452520 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
HMGB1P26-201ENST00000452520 HAX1O00165 279 aa12.09□□□□□ -0.47
HMGB1P26-201ENST00000452520 RYDENQ9NUL5 291 aaKnown RBP12.07□□□□□ -0.48
HMGB1P26-201ENST00000452520 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
HMGB1P26-201ENST00000452520 EVX2Q03828 476 aa12.04□□□□□ -0.48
HMGB1P26-201ENST00000452520 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
HMGB1P26-201ENST00000452520 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
HMGB1P26-201ENST00000452520 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
HMGB1P26-201ENST00000452520 TRPC6Q9Y210 931 aa12□□□□□ -0.49
HMGB1P26-201ENST00000452520 MFRPQ9BY79 579 aa11.99□□□□□ -0.49
HMGB1P26-201ENST00000452520 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
HMGB1P26-201ENST00000452520 SOX12O15370 315 aa11.97□□□□□ -0.49
HMGB1P26-201ENST00000452520 CLCN6P51797 869 aa11.96□□□□□ -0.49
HMGB1P26-201ENST00000452520 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
HMGB1P26-201ENST00000452520 TIE1P35590 1138 aa11.93□□□□□ -0.5
HMGB1P26-201ENST00000452520 NLRP6P59044 892 aa11.92□□□□□ -0.5
HMGB1P26-201ENST00000452520 POTEHQ6S545 545 aa11.91□□□□□ -0.5
HMGB1P26-201ENST00000452520 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
HMGB1P26-201ENST00000452520 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
HMGB1P26-201ENST00000452520 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
HMGB1P26-201ENST00000452520 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
HMGB1P26-201ENST00000452520 BMP2KQ9NSY1 1161 aaPredicted RBP11.89□□□□□ -0.51
HMGB1P26-201ENST00000452520 PPP1R37O75864 691 aa11.86□□□□□ -0.51
HMGB1P26-201ENST00000452520 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
HMGB1P26-201ENST00000452520 MS4A4AQ96JQ5 239 aa11.82□□□□□ -0.52
HMGB1P26-201ENST00000452520 GABBR2O75899 941 aa11.81□□□□□ -0.52
HMGB1P26-201ENST00000452520 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
HMGB1P26-201ENST00000452520 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
HMGB1P26-201ENST00000452520 BCANQ96GW7 911 aa11.8□□□□□ -0.52
HMGB1P26-201ENST00000452520 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P26-201ENST00000452520 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P26-201ENST00000452520 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
HMGB1P26-201ENST00000452520 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
HMGB1P26-201ENST00000452520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
HMGB1P26-201ENST00000452520 WDR70Q9NW82 654 aa11.7□□□□□ -0.54
HMGB1P26-201ENST00000452520 IER5LQ5T953 404 aa11.68□□□□□ -0.54
HMGB1P26-201ENST00000452520 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
HMGB1P26-201ENST00000452520 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
HMGB1P26-201ENST00000452520 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
HMGB1P26-201ENST00000452520 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
HMGB1P26-201ENST00000452520 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
HMGB1P26-201ENST00000452520 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
HMGB1P26-201ENST00000452520 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
HMGB1P26-201ENST00000452520 PDE4AP27815 886 aa11.62□□□□□ -0.55
HMGB1P26-201ENST00000452520 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
HMGB1P26-201ENST00000452520 NBR1Q14596 966 aa11.6□□□□□ -0.55
HMGB1P26-201ENST00000452520 LARP6Q9BRS8 491 aaKnown RBP11.6□□□□□ -0.55
HMGB1P26-201ENST00000452520 CRISPLD2Q9H0B8 497 aa11.59□□□□□ -0.55
HMGB1P26-201ENST00000452520 PLCG2P16885 1265 aa11.58□□□□□ -0.56
HMGB1P26-201ENST00000452520 P3H3Q8IVL6 736 aa11.58□□□□□ -0.56
HMGB1P26-201ENST00000452520 POTEIP0CG38 1075 aa11.57□□□□□ -0.56
HMGB1P26-201ENST00000452520 MICALL2Q8IY33 904 aa11.57□□□□□ -0.56
HMGB1P26-201ENST00000452520 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
HMGB1P26-201ENST00000452520 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
HMGB1P26-201ENST00000452520 SEC24BO95487 1268 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 C7P10643 843 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 MFSD10Q14728 455 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms