RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
GTF3C3-207ENST00000451088 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
GTF3C3-207ENST00000451088 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
GTF3C3-207ENST00000451088 SPOCK2Q92563 424 aa13.09□□□□□ -0.31
GTF3C3-207ENST00000451088 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
GTF3C3-207ENST00000451088 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
GTF3C3-207ENST00000451088 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
GTF3C3-207ENST00000451088 GSE1Q14687 1217 aa13.02□□□□□ -0.33
GTF3C3-207ENST00000451088 MS4A3Q96HJ5 214 aa13.02□□□□□ -0.33
GTF3C3-207ENST00000451088 MAP3K13O43283 966 aa13□□□□□ -0.33
GTF3C3-207ENST00000451088 POTEIP0CG38 1075 aa12.99□□□□□ -0.33
GTF3C3-207ENST00000451088 SGIP1Q9BQI5 828 aa12.98□□□□□ -0.33
GTF3C3-207ENST00000451088 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
GTF3C3-207ENST00000451088 PYGBP11216 843 aa12.93□□□□□ -0.34
GTF3C3-207ENST00000451088 CHRM1P11229 460 aaPredicted RBP12.91□□□□□ -0.34
GTF3C3-207ENST00000451088 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
GTF3C3-207ENST00000451088 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
GTF3C3-207ENST00000451088 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
GTF3C3-207ENST00000451088 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
GTF3C3-207ENST00000451088 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
GTF3C3-207ENST00000451088 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
GTF3C3-207ENST00000451088 TIE1P35590 1138 aa12.84□□□□□ -0.35
GTF3C3-207ENST00000451088 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
GTF3C3-207ENST00000451088 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
GTF3C3-207ENST00000451088 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
GTF3C3-207ENST00000451088 ZNF467Q7Z7K2 595 aaPredicted RBP12.78□□□□□ -0.36
GTF3C3-207ENST00000451088 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
GTF3C3-207ENST00000451088 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
GTF3C3-207ENST00000451088 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
GTF3C3-207ENST00000451088 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
GTF3C3-207ENST00000451088 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
GTF3C3-207ENST00000451088 C7P10643 843 aa12.68□□□□□ -0.38
GTF3C3-207ENST00000451088 PKD2Q13563 968 aa12.67□□□□□ -0.38
GTF3C3-207ENST00000451088 METRNQ9UJH8 293 aa12.67□□□□□ -0.38
GTF3C3-207ENST00000451088 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
GTF3C3-207ENST00000451088 PSEN1P49768 467 aa12.65□□□□□ -0.38
GTF3C3-207ENST00000451088 LHX8Q68G74 356 aa12.65□□□□□ -0.38
GTF3C3-207ENST00000451088 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
GTF3C3-207ENST00000451088 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
GTF3C3-207ENST00000451088 IER5LQ5T953 404 aa12.62□□□□□ -0.39
GTF3C3-207ENST00000451088 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
GTF3C3-207ENST00000451088 ECM2O94769 699 aaPredicted RBP12.6□□□□□ -0.39
GTF3C3-207ENST00000451088 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
GTF3C3-207ENST00000451088 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
GTF3C3-207ENST00000451088 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
GTF3C3-207ENST00000451088 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
GTF3C3-207ENST00000451088 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
GTF3C3-207ENST00000451088 RGL2O15211 777 aa12.51□□□□□ -0.41
GTF3C3-207ENST00000451088 SEC24BO95487 1268 aa12.5□□□□□ -0.41
GTF3C3-207ENST00000451088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
GTF3C3-207ENST00000451088 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
GTF3C3-207ENST00000451088 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
GTF3C3-207ENST00000451088 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
GTF3C3-207ENST00000451088 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
GTF3C3-207ENST00000451088 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
GTF3C3-207ENST00000451088 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
GTF3C3-207ENST00000451088 OCEL1Q9H607 264 aa12.46□□□□□ -0.41
GTF3C3-207ENST00000451088 PLCG2P16885 1265 aa12.45□□□□□ -0.42
GTF3C3-207ENST00000451088 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
GTF3C3-207ENST00000451088 OTUD5Q96G74 571 aa12.43□□□□□ -0.42
GTF3C3-207ENST00000451088 PDCD7Q8N8D1 485 aaKnown RBP12.41□□□□□ -0.42
GTF3C3-207ENST00000451088 EFCAB3Q8N7B9 438 aa12.39□□□□□ -0.43
GTF3C3-207ENST00000451088 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
GTF3C3-207ENST00000451088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.432e-11■■■■□ 20.7
GTF3C3-207ENST00000451088 MAMSTRQ6ZN01 415 aa12.38□□□□□ -0.43
GTF3C3-207ENST00000451088 STK25O00506 426 aa12.35□□□□□ -0.43
GTF3C3-207ENST00000451088 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
GTF3C3-207ENST00000451088 SOX12O15370 315 aa12.33□□□□□ -0.44
GTF3C3-207ENST00000451088 SCUBE2Q9NQ36 999 aa12.32□□□□□ -0.44
GTF3C3-207ENST00000451088 L3MBTL3Q96JM7 780 aaPredicted RBP12.28□□□□□ -0.44
GTF3C3-207ENST00000451088 DPY19L2Q6NUT2 758 aa12.27□□□□□ -0.45
GTF3C3-207ENST00000451088 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
GTF3C3-207ENST00000451088 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
GTF3C3-207ENST00000451088 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
GTF3C3-207ENST00000451088 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
GTF3C3-207ENST00000451088 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
GTF3C3-207ENST00000451088 NLRP6P59044 892 aa12.22□□□□□ -0.45
GTF3C3-207ENST00000451088 MFRPQ9BY79 579 aa12.22□□□□□ -0.45
GTF3C3-207ENST00000451088 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
GTF3C3-207ENST00000451088 CHGAP10645 457 aaKnown RBP12.2□□□□□ -0.46
GTF3C3-207ENST00000451088 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
GTF3C3-207ENST00000451088 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
GTF3C3-207ENST00000451088 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
GTF3C3-207ENST00000451088 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
GTF3C3-207ENST00000451088 SLAIN1Q8ND83 568 aa12.16□□□□□ -0.46
GTF3C3-207ENST00000451088 C3orf67Q6ZVT6 689 aa12.15□□□□□ -0.46
GTF3C3-207ENST00000451088 G3V3G9 751 aa12.13□□□□□ -0.47
GTF3C3-207ENST00000451088 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
GTF3C3-207ENST00000451088 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
GTF3C3-207ENST00000451088 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
GTF3C3-207ENST00000451088 PPP1R37O75864 691 aa12.03□□□□□ -0.48
GTF3C3-207ENST00000451088 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
GTF3C3-207ENST00000451088 LCE2DQ5TA82 110 aaPredicted RBP12□□□□□ -0.49
GTF3C3-207ENST00000451088 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
GTF3C3-207ENST00000451088 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
GTF3C3-207ENST00000451088 SNPHO15079 494 aa11.97□□□□□ -0.49
GTF3C3-207ENST00000451088 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
GTF3C3-207ENST00000451088 KIF3CO14782 793 aa11.92□□□□□ -0.5
GTF3C3-207ENST00000451088 ST18O60284 1047 aa11.91□□□□□ -0.5
GTF3C3-207ENST00000451088 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 242.7 ms