RNA–Protein interactions for RNA: ENST00000449832.1

AC009961.3-201, humanhuman

BASIC

Gene AC009961.3, Length 765 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.3-201ENST00000449832 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
AC009961.3-201ENST00000449832 CLCN6P51797 869 aa13.03□□□□□ -0.32
AC009961.3-201ENST00000449832 GALR2O43603 387 aaPredicted RBP12.98□□□□□ -0.33
AC009961.3-201ENST00000449832 KIF12Q96FN5 646 aa12.97□□□□□ -0.33
AC009961.3-201ENST00000449832 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
AC009961.3-201ENST00000449832 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
AC009961.3-201ENST00000449832 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
AC009961.3-201ENST00000449832 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
AC009961.3-201ENST00000449832 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
AC009961.3-201ENST00000449832 MAP3K13O43283 966 aa12.9□□□□□ -0.34
AC009961.3-201ENST00000449832 GSE1Q14687 1217 aa12.86□□□□□ -0.35
AC009961.3-201ENST00000449832 PYGBP11216 843 aa12.82□□□□□ -0.36
AC009961.3-201ENST00000449832 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
AC009961.3-201ENST00000449832 TRPC6Q9Y210 931 aa12.82□□□□□ -0.36
AC009961.3-201ENST00000449832 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
AC009961.3-201ENST00000449832 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
AC009961.3-201ENST00000449832 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
AC009961.3-201ENST00000449832 PCDHB13Q9Y5F0 798 aa12.78□□□□□ -0.36
AC009961.3-201ENST00000449832 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
AC009961.3-201ENST00000449832 ATMINO43313 823 aaPredicted RBP12.74□□□□□ -0.37
AC009961.3-201ENST00000449832 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
AC009961.3-201ENST00000449832 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
AC009961.3-201ENST00000449832 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
AC009961.3-201ENST00000449832 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
AC009961.3-201ENST00000449832 TIE1P35590 1138 aa12.69□□□□□ -0.38
AC009961.3-201ENST00000449832 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
AC009961.3-201ENST00000449832 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
AC009961.3-201ENST00000449832 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
AC009961.3-201ENST00000449832 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
AC009961.3-201ENST00000449832 PKD2Q13563 968 aa12.6□□□□□ -0.39
AC009961.3-201ENST00000449832 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
AC009961.3-201ENST00000449832 RNF25Q96BH1 459 aaPredicted RBP12.57□□□□□ -0.4
AC009961.3-201ENST00000449832 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
AC009961.3-201ENST00000449832 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
AC009961.3-201ENST00000449832 C7P10643 843 aa12.54□□□□□ -0.4
AC009961.3-201ENST00000449832 PSEN1P49768 467 aa12.53□□□□□ -0.4
AC009961.3-201ENST00000449832 LHX8Q68G74 356 aa12.53□□□□□ -0.4
AC009961.3-201ENST00000449832 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
AC009961.3-201ENST00000449832 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
AC009961.3-201ENST00000449832 METRNQ9UJH8 293 aa12.52□□□□□ -0.41
AC009961.3-201ENST00000449832 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
AC009961.3-201ENST00000449832 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
AC009961.3-201ENST00000449832 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
AC009961.3-201ENST00000449832 COLQQ9Y215 455 aaPredicted RBP12.46□□□□□ -0.41
AC009961.3-201ENST00000449832 IER5LQ5T953 404 aa12.45□□□□□ -0.42
AC009961.3-201ENST00000449832 RGL2O15211 777 aa12.43□□□□□ -0.42
AC009961.3-201ENST00000449832 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
AC009961.3-201ENST00000449832 IRX5P78411 483 aaPredicted RBP12.41□□□□□ -0.42
AC009961.3-201ENST00000449832 VGFO15240 615 aaPredicted RBP12.4□□□□□ -0.42
AC009961.3-201ENST00000449832 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.39□□□□□ -0.43
AC009961.3-201ENST00000449832 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
AC009961.3-201ENST00000449832 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
AC009961.3-201ENST00000449832 SEC24BO95487 1268 aa12.35□□□□□ -0.43
AC009961.3-201ENST00000449832 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
AC009961.3-201ENST00000449832 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
AC009961.3-201ENST00000449832 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
AC009961.3-201ENST00000449832 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
AC009961.3-201ENST00000449832 PLCG2P16885 1265 aa12.3□□□□□ -0.44
AC009961.3-201ENST00000449832 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
AC009961.3-201ENST00000449832 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
AC009961.3-201ENST00000449832 EFCAB3Q8N7B9 438 aa12.29□□□□□ -0.44
AC009961.3-201ENST00000449832 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
AC009961.3-201ENST00000449832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.27□□□□□ -0.45
AC009961.3-201ENST00000449832 TAOK2Q9UL54 1235 aa12.27□□□□□ -0.45
AC009961.3-201ENST00000449832 STK25O00506 426 aa12.22□□□□□ -0.45
AC009961.3-201ENST00000449832 DPY19L2Q6NUT2 758 aa12.22□□□□□ -0.45
AC009961.3-201ENST00000449832 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
AC009961.3-201ENST00000449832 SOX12O15370 315 aa12.2□□□□□ -0.46
AC009961.3-201ENST00000449832 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
AC009961.3-201ENST00000449832 MS4A4AQ96JQ5 239 aa12.17□□□□□ -0.46
AC009961.3-201ENST00000449832 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
AC009961.3-201ENST00000449832 SCUBE2Q9NQ36 999 aa12.15□□□□□ -0.46
AC009961.3-201ENST00000449832 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
AC009961.3-201ENST00000449832 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
AC009961.3-201ENST00000449832 FBXO22Q8NEZ5 403 aa12.14□□□□□ -0.47
AC009961.3-201ENST00000449832 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
AC009961.3-201ENST00000449832 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
AC009961.3-201ENST00000449832 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
AC009961.3-201ENST00000449832 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
AC009961.3-201ENST00000449832 NLRP6P59044 892 aa12.08□□□□□ -0.48
AC009961.3-201ENST00000449832 TMEM121BQ9BXQ6 578 aaPredicted RBP12.08□□□□□ -0.48
AC009961.3-201ENST00000449832 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
AC009961.3-201ENST00000449832 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
AC009961.3-201ENST00000449832 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
AC009961.3-201ENST00000449832 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
AC009961.3-201ENST00000449832 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
AC009961.3-201ENST00000449832 MICALL2Q8IY33 904 aa12□□□□□ -0.49
AC009961.3-201ENST00000449832 PPP1R37O75864 691 aa11.98□□□□□ -0.49
AC009961.3-201ENST00000449832 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
AC009961.3-201ENST00000449832 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
AC009961.3-201ENST00000449832 G3V3G9 751 aa11.94□□□□□ -0.5
AC009961.3-201ENST00000449832 LCE2DQ5TA82 110 aaPredicted RBP11.94□□□□□ -0.5
AC009961.3-201ENST00000449832 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
AC009961.3-201ENST00000449832 GTPBP6O43824 516 aaPredicted RBP11.89□□□□□ -0.51
AC009961.3-201ENST00000449832 FAM163AQ96GL9 167 aaPredicted RBP11.89□□□□□ -0.51
AC009961.3-201ENST00000449832 KIF3CO14782 793 aa11.81□□□□□ -0.52
AC009961.3-201ENST00000449832 ST18O60284 1047 aa11.81□□□□□ -0.52
AC009961.3-201ENST00000449832 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
AC009961.3-201ENST00000449832 SNPHO15079 494 aa11.8□□□□□ -0.52
AC009961.3-201ENST00000449832 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms