RNA–Protein interactions for RNA: ENST00000448786.1

AC007879.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC007879.3, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-202ENST00000448786 OTUD5Q96G74 571 aa11.44□□□□□ -0.58
AC007879.3-202ENST00000448786 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
AC007879.3-202ENST00000448786 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
AC007879.3-202ENST00000448786 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
AC007879.3-202ENST00000448786 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
AC007879.3-202ENST00000448786 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
AC007879.3-202ENST00000448786 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
AC007879.3-202ENST00000448786 POTEMA6NI47 508 aa11.37□□□□□ -0.59
AC007879.3-202ENST00000448786 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
AC007879.3-202ENST00000448786 NUBP1P53384 320 aa11.36□□□□□ -0.59
AC007879.3-202ENST00000448786 MS4A3Q96HJ5 214 aa11.33□□□□□ -0.6
AC007879.3-202ENST00000448786 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
AC007879.3-202ENST00000448786 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
AC007879.3-202ENST00000448786 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
AC007879.3-202ENST00000448786 MAP3K13O43283 966 aa11.27□□□□□ -0.61
AC007879.3-202ENST00000448786 GSE1Q14687 1217 aa11.22□□□□□ -0.61
AC007879.3-202ENST00000448786 SGIP1Q9BQI5 828 aa11.22□□□□□ -0.61
AC007879.3-202ENST00000448786 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
AC007879.3-202ENST00000448786 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
AC007879.3-202ENST00000448786 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
AC007879.3-202ENST00000448786 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
AC007879.3-202ENST00000448786 ATMINO43313 823 aaPredicted RBP11.18□□□□□ -0.62
AC007879.3-202ENST00000448786 PYGBP11216 843 aa11.16□□□□□ -0.62
AC007879.3-202ENST00000448786 TIE1P35590 1138 aa11.16□□□□□ -0.62
AC007879.3-202ENST00000448786 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
AC007879.3-202ENST00000448786 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
AC007879.3-202ENST00000448786 LCE2DQ5TA82 110 aaPredicted RBP11.15□□□□□ -0.62
AC007879.3-202ENST00000448786 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
AC007879.3-202ENST00000448786 IFNL1Q8IU54 200 aa11.13□□□□□ -0.63
AC007879.3-202ENST00000448786 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
AC007879.3-202ENST00000448786 C7P10643 843 aa11.12□□□□□ -0.63
AC007879.3-202ENST00000448786 ATN1P54259 1190 aaPredicted RBP11.12□□□□□ -0.63
AC007879.3-202ENST00000448786 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
AC007879.3-202ENST00000448786 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
AC007879.3-202ENST00000448786 TRPC6Q9Y210 931 aa11.12□□□□□ -0.63
AC007879.3-202ENST00000448786 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
AC007879.3-202ENST00000448786 TTLL13PA6NNM8 815 aa11.08□□□□□ -0.64
AC007879.3-202ENST00000448786 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
AC007879.3-202ENST00000448786 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
AC007879.3-202ENST00000448786 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
AC007879.3-202ENST00000448786 PCDHB8Q9UN66 801 aa11.04□□□□□ -0.64
AC007879.3-202ENST00000448786 TRIM35Q9UPQ4 493 aa11.02□□□□□ -0.65
AC007879.3-202ENST00000448786 SEC24BO95487 1268 aa11.01□□□□□ -0.65
AC007879.3-202ENST00000448786 IER5LQ5T953 404 aa10.99□□□□□ -0.65
AC007879.3-202ENST00000448786 TRIM41Q8WV44 630 aa10.99□□□□□ -0.65
AC007879.3-202ENST00000448786 MAMSTRQ6ZN01 415 aa10.94□□□□□ -0.66
AC007879.3-202ENST00000448786 GOLGA2Q08379 1002 aa10.93□□□□□ -0.66
AC007879.3-202ENST00000448786 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
AC007879.3-202ENST00000448786 PSEN1P49768 467 aa10.91□□□□□ -0.66
AC007879.3-202ENST00000448786 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
AC007879.3-202ENST00000448786 PLCG2P16885 1265 aa10.9□□□□□ -0.66
AC007879.3-202ENST00000448786 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
AC007879.3-202ENST00000448786 SCUBE2Q9NQ36 999 aa10.89□□□□□ -0.67
AC007879.3-202ENST00000448786 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
AC007879.3-202ENST00000448786 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
AC007879.3-202ENST00000448786 OCEL1Q9H607 264 aa10.84□□□□□ -0.67
AC007879.3-202ENST00000448786 IRX5P78411 483 aaPredicted RBP10.83□□□□□ -0.68
AC007879.3-202ENST00000448786 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
AC007879.3-202ENST00000448786 CABP2Q9NPB3 220 aa10.79□□□□□ -0.68
AC007879.3-202ENST00000448786 CDAN1Q8IWY9 1227 aa10.77□□□□□ -0.69
AC007879.3-202ENST00000448786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.69
AC007879.3-202ENST00000448786 TAOK2Q9UL54 1235 aa10.77□□□□□ -0.69
AC007879.3-202ENST00000448786 VGFO15240 615 aaPredicted RBP10.75□□□□□ -0.69
AC007879.3-202ENST00000448786 ECM2O94769 699 aaPredicted RBP10.74□□□□□ -0.69
AC007879.3-202ENST00000448786 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
AC007879.3-202ENST00000448786 L3MBTL3Q96JM7 780 aaPredicted RBP10.71□□□□□ -0.69
AC007879.3-202ENST00000448786 PDCD7Q8N8D1 485 aaKnown RBP10.7□□□□□ -0.7
AC007879.3-202ENST00000448786 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
AC007879.3-202ENST00000448786 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
AC007879.3-202ENST00000448786 SLAIN1Q8ND83 568 aa10.68□□□□□ -0.7
AC007879.3-202ENST00000448786 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.68□□□□□ -0.7
AC007879.3-202ENST00000448786 G3V3G9 751 aa10.67□□□□□ -0.7
AC007879.3-202ENST00000448786 PKD2Q13563 968 aa10.67□□□□□ -0.7
AC007879.3-202ENST00000448786 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
AC007879.3-202ENST00000448786 C3orf67Q6ZVT6 689 aa10.66□□□□□ -0.7
AC007879.3-202ENST00000448786 ILDR1Q86SU0 546 aaPredicted RBP10.63□□□□□ -0.71
AC007879.3-202ENST00000448786 SOX12O15370 315 aa10.62□□□□□ -0.71
AC007879.3-202ENST00000448786 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
AC007879.3-202ENST00000448786 STK24Q9Y6E0 443 aa10.61□□□□□ -0.71
AC007879.3-202ENST00000448786 STK25O00506 426 aa10.6□□□□□ -0.71
AC007879.3-202ENST00000448786 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
AC007879.3-202ENST00000448786 RGL2O15211 777 aa10.59□□□□□ -0.71
AC007879.3-202ENST00000448786 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
AC007879.3-202ENST00000448786 BOLA1Q9Y3E2 137 aa10.58□□□□□ -0.72
AC007879.3-202ENST00000448786 ST18O60284 1047 aa10.57□□□□□ -0.72
AC007879.3-202ENST00000448786 SNPHO15079 494 aa10.56□□□□□ -0.72
AC007879.3-202ENST00000448786 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
AC007879.3-202ENST00000448786 NLRP6P59044 892 aa10.53□□□□□ -0.72
AC007879.3-202ENST00000448786 PHF8Q9UPP1 1060 aa10.53□□□□□ -0.72
AC007879.3-202ENST00000448786 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
AC007879.3-202ENST00000448786 TMEM121BQ9BXQ6 578 aaPredicted RBP10.47□□□□□ -0.73
AC007879.3-202ENST00000448786 MICALL2Q8IY33 904 aa10.46□□□□□ -0.73
AC007879.3-202ENST00000448786 MFRPQ9BY79 579 aa10.44□□□□□ -0.74
AC007879.3-202ENST00000448786 FBXO22Q8NEZ5 403 aa10.43□□□□□ -0.74
AC007879.3-202ENST00000448786 CHGAP10645 457 aaKnown RBP10.41□□□□□ -0.74
AC007879.3-202ENST00000448786 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
AC007879.3-202ENST00000448786 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
AC007879.3-202ENST00000448786 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
AC007879.3-202ENST00000448786 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
AC007879.3-202ENST00000448786 RIMBP2O15034 1052 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms