RNA–Protein interactions for RNA: ENST00000447393.5

PACS2-203, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 6,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-203ENST00000447393 MYH16Q9H6N6 1097 aa23.52■■□□□ 1.36
PACS2-203ENST00000447393 IRX6P78412 446 aaPredicted RBP23.48■■□□□ 1.35
PACS2-203ENST00000447393 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
PACS2-203ENST00000447393 ARID4BQ4LE39 1312 aaPredicted RBP23.45■■□□□ 1.35
PACS2-203ENST00000447393 NBR1Q14596 966 aa23.45■■□□□ 1.34
PACS2-203ENST00000447393 PLEKHD1A6NEE1 506 aa23.43■■□□□ 1.34
PACS2-203ENST00000447393 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
PACS2-203ENST00000447393 EIF4G2P78344 907 aaKnown RBP eCLIP23.43■■□□□ 1.34
PACS2-203ENST00000447393 CLIP1P30622 1438 aa23.37■■□□□ 1.33
PACS2-203ENST00000447393 PPM1GO15355 546 aaPredicted RBP23.35■■□□□ 1.33
PACS2-203ENST00000447393 SENP3-EIF4A1A0A087X0R7 540 aa23.34■■□□□ 1.33
PACS2-203ENST00000447393 CDK11BP21127 795 aaKnown RBP23.32■■□□□ 1.32
PACS2-203ENST00000447393 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
PACS2-203ENST00000447393 MIER1Q8N108 512 aa23.3■■□□□ 1.32
PACS2-203ENST00000447393 CFAP53Q96M91 514 aa23.27■■□□□ 1.32
PACS2-203ENST00000447393 CFDP1Q9UEE9 299 aaPredicted RBP23.26■■□□□ 1.31
PACS2-203ENST00000447393 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
PACS2-203ENST00000447393 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
PACS2-203ENST00000447393 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
PACS2-203ENST00000447393 KNSTRNQ9Y448 316 aa23.23■■□□□ 1.31
PACS2-203ENST00000447393 NEUROD2Q15784 382 aa23.18■■□□□ 1.3
PACS2-203ENST00000447393 LAS1LQ9Y4W2 734 aaKnown RBP23.18■■□□□ 1.3
PACS2-203ENST00000447393 CDCA8Q53HL2 280 aa23.17■■□□□ 1.3
PACS2-203ENST00000447393 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
PACS2-203ENST00000447393 NCLP19338 710 aaKnown RBP23.16■■□□□ 1.3
PACS2-203ENST00000447393 POGKQ9P215 609 aa23.14■■□□□ 1.3
PACS2-203ENST00000447393 BECN1Q14457 450 aa23.14■■□□□ 1.29
PACS2-203ENST00000447393 FTSJ3Q8IY81 847 aaKnown RBP23.12■■□□□ 1.29
PACS2-203ENST00000447393 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
PACS2-203ENST00000447393 TNNT2P45379 298 aaPredicted RBP23.09■■□□□ 1.29
PACS2-203ENST00000447393 TPRNQ4KMQ1 711 aa23.09■■□□□ 1.29
PACS2-203ENST00000447393 GOLGA3Q08378 1498 aa23.07■■□□□ 1.28
PACS2-203ENST00000447393 TULP1O00294 542 aaPredicted RBP23.07■■□□□ 1.28
PACS2-203ENST00000447393 NPHP1O15259 732 aa23.07■■□□□ 1.28
PACS2-203ENST00000447393 DDRGK1Q96HY6 314 aa23.05■■□□□ 1.28
PACS2-203ENST00000447393 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
PACS2-203ENST00000447393 GOLGA6L22H0YM25 854 aa23.04■■□□□ 1.28
PACS2-203ENST00000447393 CASC1Q6TDU7 716 aa23.04■■□□□ 1.28
PACS2-203ENST00000447393 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
PACS2-203ENST00000447393 ZRSR1Q15695 479 aaKnown RBP23.01■■□□□ 1.27
PACS2-203ENST00000447393 GLIPR1L2Q4G1C9 344 aa23.01■■□□□ 1.27
PACS2-203ENST00000447393 TAOK2Q9UL54 1235 aa23.01■■□□□ 1.27
PACS2-203ENST00000447393 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
PACS2-203ENST00000447393 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
PACS2-203ENST00000447393 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
PACS2-203ENST00000447393 TRIM44Q96DX7 344 aaPredicted RBP22.98■■□□□ 1.27
PACS2-203ENST00000447393 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
PACS2-203ENST00000447393 U2SURPO15042 1029 aaKnown RBP22.97■■□□□ 1.27
PACS2-203ENST00000447393 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
PACS2-203ENST00000447393 CC2D1BQ5T0F9 858 aaKnown RBP22.97■■□□□ 1.27
PACS2-203ENST00000447393 MLECQ14165 292 aa22.97■■□□□ 1.27
PACS2-203ENST00000447393 KIF27Q86VH2 1401 aa22.97■■□□□ 1.27
PACS2-203ENST00000447393 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
PACS2-203ENST00000447393 EEA1Q15075 1411 aa22.96■■□□□ 1.27
PACS2-203ENST00000447393 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
PACS2-203ENST00000447393 SIN3AQ96ST3 1273 aa22.94■■□□□ 1.26
PACS2-203ENST00000447393 SOX12O15370 315 aa22.93■■□□□ 1.26
PACS2-203ENST00000447393 OS9Q13438 667 aaPredicted RBP22.93■■□□□ 1.26
PACS2-203ENST00000447393 PTMAP06454 111 aaKnown RBP22.9■■□□□ 1.26
PACS2-203ENST00000447393 RGS3P49796 1198 aa22.9■■□□□ 1.26
PACS2-203ENST00000447393 ANP32EQ9BTT0 268 aa22.89■■□□□ 1.25
PACS2-203ENST00000447393 CCNB3Q8WWL7 1395 aa22.86■■□□□ 1.25
PACS2-203ENST00000447393 DCAF11Q8TEB1 546 aa22.85■■□□□ 1.25
PACS2-203ENST00000447393 FGD1P98174 961 aa22.84■■□□□ 1.25
PACS2-203ENST00000447393 SAFB2Q14151 953 aaKnown RBP eCLIP22.84■■□□□ 1.25
PACS2-203ENST00000447393 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
PACS2-203ENST00000447393 GOLGA2Q08379 1002 aa22.82■■□□□ 1.24
PACS2-203ENST00000447393 NAP1L2Q9ULW6 460 aaPredicted RBP22.82■■□□□ 1.24
PACS2-203ENST00000447393 KCNJ4P48050 445 aa22.81■■□□□ 1.24
PACS2-203ENST00000447393 TMF1P82094 1093 aa22.8■■□□□ 1.24
PACS2-203ENST00000447393 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
PACS2-203ENST00000447393 KANK1Q14678 1352 aa22.79■■□□□ 1.24
PACS2-203ENST00000447393 PNNQ9H307 717 aaKnown RBP22.78■■□□□ 1.24
PACS2-203ENST00000447393 DNTTIP2Q5QJE6 756 aaKnown RBP22.78■■□□□ 1.24
PACS2-203ENST00000447393 HDGFP51858 240 aaKnown RBP22.77■■□□□ 1.24
PACS2-203ENST00000447393 PLCB2Q00722 1185 aa22.77■■□□□ 1.24
PACS2-203ENST00000447393 CHMP4BQ9H444 224 aaKnown RBP22.77■■□□□ 1.24
PACS2-203ENST00000447393 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.24
PACS2-203ENST00000447393 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
PACS2-203ENST00000447393 GGT6Q6P531 493 aa22.74■■□□□ 1.23
PACS2-203ENST00000447393 MS4A1P11836 297 aa22.73■■□□□ 1.23
PACS2-203ENST00000447393 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
PACS2-203ENST00000447393 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
PACS2-203ENST00000447393 STK26Q9P289 416 aa22.72■■□□□ 1.23
PACS2-203ENST00000447393 HSP90AB1P08238 724 aaKnown RBP22.72■■□□□ 1.23
PACS2-203ENST00000447393 MORC1Q86VD1 984 aa22.71■■□□□ 1.23
PACS2-203ENST00000447393 PPP4R2Q9NY27 417 aa22.69■■□□□ 1.22
PACS2-203ENST00000447393 RTF1Q92541 710 aaKnown RBP22.65■■□□□ 1.22
PACS2-203ENST00000447393 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
PACS2-203ENST00000447393 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
PACS2-203ENST00000447393 B4GALNT3Q6L9W6 998 aa22.63■■□□□ 1.21
PACS2-203ENST00000447393 ISY1Q9ULR0 285 aaKnown RBP22.62■■□□□ 1.21
PACS2-203ENST00000447393 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
PACS2-203ENST00000447393 CUX2O14529 1486 aa22.59■■□□□ 1.21
PACS2-203ENST00000447393 GOLGA6L4A6NEF3 574 aa22.59■■□□□ 1.21
PACS2-203ENST00000447393 ZNF330Q9Y3S2 320 aaPredicted RBP22.58■■□□□ 1.21
PACS2-203ENST00000447393 HDGFL2Q7Z4V5 671 aaPredicted RBP22.58■■□□□ 1.2
PACS2-203ENST00000447393 APBB1O00213 710 aa22.57■■□□□ 1.2
PACS2-203ENST00000447393 PKD2Q13563 968 aa22.57■■□□□ 1.2
PACS2-203ENST00000447393 CSB-PGBD3P0DP91 1061 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms