RNA–Protein interactions for RNA: ENST00000445514.1

LINC01828-201, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 4 BASIC

Gene LINC01828, Length 531 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-201ENST00000445514 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
LINC01828-201ENST00000445514 METRNQ9UJH8 293 aa12.21□□□□□ -0.45
LINC01828-201ENST00000445514 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
LINC01828-201ENST00000445514 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
LINC01828-201ENST00000445514 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
LINC01828-201ENST00000445514 SLC39A7Q92504 469 aa12.15□□□□□ -0.46
LINC01828-201ENST00000445514 POTEMA6NI47 508 aa12.13□□□□□ -0.47
LINC01828-201ENST00000445514 C7P10643 843 aa12.13□□□□□ -0.47
LINC01828-201ENST00000445514 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
LINC01828-201ENST00000445514 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
LINC01828-201ENST00000445514 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
LINC01828-201ENST00000445514 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
LINC01828-201ENST00000445514 RASEFQ8IZ41 740 aa12.05□□□□□ -0.48
LINC01828-201ENST00000445514 BMP2KQ9NSY1 1161 aaPredicted RBP12.05□□□□□ -0.48
LINC01828-201ENST00000445514 POTEFA5A3E0 1075 aa12.03□□□□□ -0.48
LINC01828-201ENST00000445514 MAP3K13O43283 966 aa12.03□□□□□ -0.48
LINC01828-201ENST00000445514 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
LINC01828-201ENST00000445514 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
LINC01828-201ENST00000445514 MIER1Q8N108 512 aa12.01□□□□□ -0.49
LINC01828-201ENST00000445514 LCE2DQ5TA82 110 aaPredicted RBP12□□□□□ -0.49
LINC01828-201ENST00000445514 MAMSTRQ6ZN01 415 aa12□□□□□ -0.49
LINC01828-201ENST00000445514 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
LINC01828-201ENST00000445514 TIE1P35590 1138 aa11.96□□□□□ -0.49
LINC01828-201ENST00000445514 SCUBE2Q9NQ36 999 aa11.95□□□□□ -0.5
LINC01828-201ENST00000445514 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
LINC01828-201ENST00000445514 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
LINC01828-201ENST00000445514 FAM163AQ96GL9 167 aaPredicted RBP11.9□□□□□ -0.5
LINC01828-201ENST00000445514 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
LINC01828-201ENST00000445514 PCDH10Q9P2E7 1040 aa11.87□□□□□ -0.51
LINC01828-201ENST00000445514 NUBP1P53384 320 aa11.85□□□□□ -0.51
LINC01828-201ENST00000445514 PCDHB13Q9Y5F0 798 aa11.85□□□□□ -0.51
LINC01828-201ENST00000445514 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
LINC01828-201ENST00000445514 SEC24BO95487 1268 aa11.83□□□□□ -0.52
LINC01828-201ENST00000445514 SGIP1Q9BQI5 828 aa11.82□□□□□ -0.52
LINC01828-201ENST00000445514 IFNL1Q8IU54 200 aa11.81□□□□□ -0.52
LINC01828-201ENST00000445514 IER5LQ5T953 404 aa11.79□□□□□ -0.52
LINC01828-201ENST00000445514 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
LINC01828-201ENST00000445514 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
LINC01828-201ENST00000445514 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
LINC01828-201ENST00000445514 FKBP8Q14318 412 aa11.7□□□□□ -0.54
LINC01828-201ENST00000445514 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
LINC01828-201ENST00000445514 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
LINC01828-201ENST00000445514 PLCG2P16885 1265 aa11.64□□□□□ -0.55
LINC01828-201ENST00000445514 CDAN1Q8IWY9 1227 aa11.64□□□□□ -0.55
LINC01828-201ENST00000445514 ST18O60284 1047 aa11.63□□□□□ -0.55
LINC01828-201ENST00000445514 PYGBP11216 843 aa11.62□□□□□ -0.55
LINC01828-201ENST00000445514 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
LINC01828-201ENST00000445514 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
LINC01828-201ENST00000445514 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
LINC01828-201ENST00000445514 PDCD7Q8N8D1 485 aaKnown RBP11.47□□□□□ -0.57
LINC01828-201ENST00000445514 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
LINC01828-201ENST00000445514 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
LINC01828-201ENST00000445514 TMEM121BQ9BXQ6 578 aaPredicted RBP11.44□□□□□ -0.58
LINC01828-201ENST00000445514 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
LINC01828-201ENST00000445514 SNPHO15079 494 aa11.41□□□□□ -0.58
LINC01828-201ENST00000445514 VASPP50552 380 aaPredicted RBP11.41□□□□□ -0.58
LINC01828-201ENST00000445514 ZNF467Q7Z7K2 595 aaPredicted RBP11.4□□□□□ -0.58
LINC01828-201ENST00000445514 GSE1Q14687 1217 aa11.39□□□□□ -0.59
LINC01828-201ENST00000445514 KLHL34Q8N239 644 aa11.39□□□□□ -0.59
LINC01828-201ENST00000445514 SPNS2Q8IVW8 549 aa11.38□□□□□ -0.59
LINC01828-201ENST00000445514 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
LINC01828-201ENST00000445514 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
LINC01828-201ENST00000445514 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
LINC01828-201ENST00000445514 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
LINC01828-201ENST00000445514 C3orf67Q6ZVT6 689 aa11.35□□□□□ -0.59
LINC01828-201ENST00000445514 PSEN1P49768 467 aa11.34□□□□□ -0.59
LINC01828-201ENST00000445514 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC01828-201ENST00000445514 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
LINC01828-201ENST00000445514 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
LINC01828-201ENST00000445514 EMP3P54852 163 aa11.29□□□□□ -0.6
LINC01828-201ENST00000445514 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
LINC01828-201ENST00000445514 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
LINC01828-201ENST00000445514 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
LINC01828-201ENST00000445514 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
LINC01828-201ENST00000445514 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
LINC01828-201ENST00000445514 HS3ST6Q96QI5 342 aa11.23□□□□□ -0.61
LINC01828-201ENST00000445514 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
LINC01828-201ENST00000445514 KRTAP3-2Q9BYR7 98 aa11.23□□□□□ -0.61
LINC01828-201ENST00000445514 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
LINC01828-201ENST00000445514 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
LINC01828-201ENST00000445514 IFNLR1Q8IU57 520 aaPredicted RBP11.2□□□□□ -0.62
LINC01828-201ENST00000445514 CIZ1Q9ULV3 898 aaPredicted RBP11.18□□□□□ -0.62
LINC01828-201ENST00000445514 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
LINC01828-201ENST00000445514 SPOCK2Q92563 424 aa11.17□□□□□ -0.62
LINC01828-201ENST00000445514 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
LINC01828-201ENST00000445514 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
LINC01828-201ENST00000445514 G3V3G9 751 aa11.11□□□□□ -0.63
LINC01828-201ENST00000445514 BCANQ96GW7 911 aa11.1□□□□□ -0.63
LINC01828-201ENST00000445514 HOXB1P14653 301 aaPredicted RBP11.07□□□□□ -0.64
LINC01828-201ENST00000445514 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
LINC01828-201ENST00000445514 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
LINC01828-201ENST00000445514 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
LINC01828-201ENST00000445514 DOK7Q18PE1 504 aa11.03□□□□□ -0.64
LINC01828-201ENST00000445514 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
LINC01828-201ENST00000445514 TMEM92Q6UXU6 159 aa11.01□□□□□ -0.65
LINC01828-201ENST00000445514 ERBB3P21860 1342 aa11□□□□□ -0.65
LINC01828-201ENST00000445514 MICALL2Q8IY33 904 aa10.98□□□□□ -0.65
LINC01828-201ENST00000445514 ARXQ96QS3 562 aa10.98□□□□□ -0.65
LINC01828-201ENST00000445514 VARS2Q5ST30 1063 aaKnown RBP10.96□□□□□ -0.65
LINC01828-201ENST00000445514 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms