RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 RTN4Q9NQC3 1192 aaKnown RBP7.59□□□□□ -1.19
PTPN12-207ENST00000440186 ZRANB1Q9UGI0 708 aa7.58□□□□□ -1.2
PTPN12-207ENST00000440186 PKD2Q13563 968 aa7.56□□□□□ -1.2
PTPN12-207ENST00000440186 CCDC61Q9Y6R9 512 aa7.56□□□□□ -1.2
PTPN12-207ENST00000440186 EVX2Q03828 476 aa7.54□□□□□ -1.2
PTPN12-207ENST00000440186 ZNF579Q8NAF0 562 aaKnown RBP7.54□□□□□ -1.2
PTPN12-207ENST00000440186 TRIM41Q8WV44 630 aa7.53□□□□□ -1.2
PTPN12-207ENST00000440186 PHF12Q96QT6 1004 aa7.53□□□□□ -1.2
PTPN12-207ENST00000440186 ECM2O94769 699 aaPredicted RBP7.51□□□□□ -1.21
PTPN12-207ENST00000440186 PYGBP11216 843 aa7.51□□□□□ -1.21
PTPN12-207ENST00000440186 CHRM1P11229 460 aaPredicted RBP7.49□□□□□ -1.21
PTPN12-207ENST00000440186 KIF12Q96FN5 646 aa7.48□□□□□ -1.21
PTPN12-207ENST00000440186 MAP3K13O43283 966 aa7.46□□□□□ -1.22
PTPN12-207ENST00000440186 RGL2O15211 777 aa7.45□□□□□ -1.22
PTPN12-207ENST00000440186 RNF25Q96BH1 459 aaPredicted RBP7.45□□□□□ -1.22
PTPN12-207ENST00000440186 PCDHB13Q9Y5F0 798 aa7.45□□□□□ -1.22
PTPN12-207ENST00000440186 MS4A3Q96HJ5 214 aa7.44□□□□□ -1.22
PTPN12-207ENST00000440186 SGIP1Q9BQI5 828 aa7.43□□□□□ -1.22
PTPN12-207ENST00000440186 RIOK3O14730 519 aaKnown RBP7.42□□□□□ -1.22
PTPN12-207ENST00000440186 ZNF467Q7Z7K2 595 aaPredicted RBP7.42□□□□□ -1.22
PTPN12-207ENST00000440186 IFNL1Q8IU54 200 aa7.42□□□□□ -1.22
PTPN12-207ENST00000440186 SP7Q8TDD2 431 aaPredicted RBP7.42□□□□□ -1.22
PTPN12-207ENST00000440186 GALR2O43603 387 aaPredicted RBP7.41□□□□□ -1.22
PTPN12-207ENST00000440186 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
PTPN12-207ENST00000440186 GABBR2O75899 941 aa7.4□□□□□ -1.22
PTPN12-207ENST00000440186 CLCN6P51797 869 aa7.4□□□□□ -1.22
PTPN12-207ENST00000440186 VGFO15240 615 aaPredicted RBP7.37□□□□□ -1.23
PTPN12-207ENST00000440186 DCAF8L2P0C7V8 631 aa7.37□□□□□ -1.23
PTPN12-207ENST00000440186 TRPC6Q9Y210 931 aa7.37□□□□□ -1.23
PTPN12-207ENST00000440186 PDAP1Q13442 181 aaKnown RBP7.35□□□□□ -1.23
PTPN12-207ENST00000440186 TAOK2Q9UL54 1235 aa7.35□□□□□ -1.23
PTPN12-207ENST00000440186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.34□□□□□ -1.23
PTPN12-207ENST00000440186 PSEN1P49768 467 aa7.34□□□□□ -1.23
PTPN12-207ENST00000440186 ZFP91Q96JP5 570 aaPredicted RBP7.34□□□□□ -1.23
PTPN12-207ENST00000440186 TIE1P35590 1138 aa7.32□□□□□ -1.24
PTPN12-207ENST00000440186 TMEM106CQ9BVX2 250 aa7.31□□□□□ -1.24
PTPN12-207ENST00000440186 BMP2KQ9NSY1 1161 aaPredicted RBP7.31□□□□□ -1.24
PTPN12-207ENST00000440186 STK25O00506 426 aa7.3□□□□□ -1.24
PTPN12-207ENST00000440186 CHGAP10645 457 aaKnown RBP7.3□□□□□ -1.24
PTPN12-207ENST00000440186 HS6ST3Q8IZP7 471 aa7.3□□□□□ -1.24
PTPN12-207ENST00000440186 TTLL13PA6NNM8 815 aa7.29□□□□□ -1.24
PTPN12-207ENST00000440186 BCL11BQ9C0K0 894 aaPredicted RBP7.29□□□□□ -1.24
PTPN12-207ENST00000440186 DCBLD2Q96PD2 775 aa7.28□□□□□ -1.24
PTPN12-207ENST00000440186 STK24Q9Y6E0 443 aa7.28□□□□□ -1.24
PTPN12-207ENST00000440186 ATMINO43313 823 aaPredicted RBP7.27□□□□□ -1.25
PTPN12-207ENST00000440186 ASTLQ6HA08 431 aaPredicted RBP7.27□□□□□ -1.25
PTPN12-207ENST00000440186 POTEIP0CG38 1075 aa7.26□□□□□ -1.25
PTPN12-207ENST00000440186 ATN1P54259 1190 aaPredicted RBP7.26□□□□□ -1.25
PTPN12-207ENST00000440186 CABP2Q9NPB3 220 aa7.25□□□□□ -1.25
PTPN12-207ENST00000440186 TRIM35Q9UPQ4 493 aa7.24□□□□□ -1.25
PTPN12-207ENST00000440186 GOLGA2Q08379 1002 aa7.22□□□□□ -1.25
PTPN12-207ENST00000440186 PELP1Q8IZL8 1130 aaKnown RBP7.22□□□□□ -1.25
PTPN12-207ENST00000440186 DNAJC5Q9H3Z4 198 aa7.22□□□□□ -1.25
PTPN12-207ENST00000440186 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
PTPN12-207ENST00000440186 MKRN3Q13064 507 aaKnown RBP7.19□□□□□ -1.26
PTPN12-207ENST00000440186 NKX1-1Q15270 411 aaPredicted RBP7.19□□□□□ -1.26
PTPN12-207ENST00000440186 BBXQ8WY36 941 aaPredicted RBP7.19□□□□□ -1.26
PTPN12-207ENST00000440186 IER5LQ5T953 404 aa7.18□□□□□ -1.26
PTPN12-207ENST00000440186 SLC39A7Q92504 469 aa7.17□□□□□ -1.26
PTPN12-207ENST00000440186 SOX12O15370 315 aa7.16□□□□□ -1.26
PTPN12-207ENST00000440186 MFRPQ9BY79 579 aa7.16□□□□□ -1.26
PTPN12-207ENST00000440186 METRNQ9UJH8 293 aa7.16□□□□□ -1.26
PTPN12-207ENST00000440186 PHF8Q9UPP1 1060 aa7.16□□□□□ -1.26
PTPN12-207ENST00000440186 IRX5P78411 483 aaPredicted RBP7.15□□□□□ -1.26
PTPN12-207ENST00000440186 C7P10643 843 aa7.14□□□□□ -1.27
PTPN12-207ENST00000440186 FBXO22Q8NEZ5 403 aa7.14□□□□□ -1.27
PTPN12-207ENST00000440186 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.14□□□□□ -1.275e-8■■■■■ 28.5
PTPN12-207ENST00000440186 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-207ENST00000440186 NLRP6P59044 892 aa7.13□□□□□ -1.27
PTPN12-207ENST00000440186 ILDR1Q86SU0 546 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-207ENST00000440186 POTEFA5A3E0 1075 aa7.12□□□□□ -1.27
PTPN12-207ENST00000440186 PLCG2P16885 1265 aa7.12□□□□□ -1.27
PTPN12-207ENST00000440186 PDCD7Q8N8D1 485 aaKnown RBP7.12□□□□□ -1.27
PTPN12-207ENST00000440186 MS4A4AQ96JQ5 239 aa7.12□□□□□ -1.27
PTPN12-207ENST00000440186 COLQQ9Y215 455 aaPredicted RBP7.12□□□□□ -1.27
PTPN12-207ENST00000440186 GTPBP6O43824 516 aaPredicted RBP7.11□□□□□ -1.27
PTPN12-207ENST00000440186 SEC24BO95487 1268 aa7.11□□□□□ -1.27
PTPN12-207ENST00000440186 OCEL1Q9H607 264 aa7.11□□□□□ -1.27
PTPN12-207ENST00000440186 RYDENQ9NUL5 291 aaKnown RBP7.11□□□□□ -1.27
PTPN12-207ENST00000440186 PAXIP1Q6ZW49 1069 aaPredicted RBP7.09□□□□□ -1.27
PTPN12-207ENST00000440186 SPRYD3Q8NCJ5 442 aa7.09□□□□□ -1.27
PTPN12-207ENST00000440186 CFAP44Q96MT7 982 aa7.08□□□□□ -1.28
PTPN12-207ENST00000440186 DPY19L2Q6NUT2 758 aa7.07□□□□□ -1.28
PTPN12-207ENST00000440186 PLCB2Q00722 1185 aa7.06□□□□□ -1.28
PTPN12-207ENST00000440186 PPP1R37O75864 691 aa7.05□□□□□ -1.28
PTPN12-207ENST00000440186 POTEB2H3BUK9 544 aa7.02□□□□□ -1.29
PTPN12-207ENST00000440186 MICALL2Q8IY33 904 aa7.02□□□□□ -1.29
PTPN12-207ENST00000440186 L3MBTL3Q96JM7 780 aaPredicted RBP7.02□□□□□ -1.29
PTPN12-207ENST00000440186 BOLA1Q9Y3E2 137 aa7.02□□□□□ -1.29
PTPN12-207ENST00000440186 G3V3G9 751 aa7.01□□□□□ -1.29
PTPN12-207ENST00000440186 POTEJP0CG39 1038 aa6.99□□□□□ -1.29
PTPN12-207ENST00000440186 TMEM121BQ9BXQ6 578 aaPredicted RBP6.99□□□□□ -1.29
PTPN12-207ENST00000440186 C3orf67Q6ZVT6 689 aa6.97□□□□□ -1.29
PTPN12-207ENST00000440186 HAP1P54257 671 aaPredicted RBP6.96□□□□□ -1.3
PTPN12-207ENST00000440186 LHX8Q68G74 356 aa6.96□□□□□ -1.3
PTPN12-207ENST00000440186 TSHZ2Q9NRE2 1034 aa6.96□□□□□ -1.3
PTPN12-207ENST00000440186 CADPS2Q86UW7 1296 aa6.95□□□□□ -1.3
PTPN12-207ENST00000440186 MAMSTRQ6ZN01 415 aa6.94□□□□□ -1.3
PTPN12-207ENST00000440186 SCUBE2Q9NQ36 999 aa6.94□□□□□ -1.3
PTPN12-207ENST00000440186 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms