RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
SUMO1P3-201ENST00000439961 ASTLQ6HA08 431 aaPredicted RBP11.47□□□□□ -0.57
SUMO1P3-201ENST00000439961 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
SUMO1P3-201ENST00000439961 ATMINO43313 823 aaPredicted RBP11.41□□□□□ -0.58
SUMO1P3-201ENST00000439961 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
SUMO1P3-201ENST00000439961 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
SUMO1P3-201ENST00000439961 NPM1P06748 294 aaKnown RBP eCLIP11.33□□□□□ -0.6
SUMO1P3-201ENST00000439961 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
SUMO1P3-201ENST00000439961 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
SUMO1P3-201ENST00000439961 POTEFA5A3E0 1075 aa11.17□□□□□ -0.62
SUMO1P3-201ENST00000439961 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
SUMO1P3-201ENST00000439961 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
SUMO1P3-201ENST00000439961 ST18O60284 1047 aa11.13□□□□□ -0.63
SUMO1P3-201ENST00000439961 SEC24BO95487 1268 aa11.11□□□□□ -0.63
SUMO1P3-201ENST00000439961 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
SUMO1P3-201ENST00000439961 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
SUMO1P3-201ENST00000439961 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
SUMO1P3-201ENST00000439961 TIE1P35590 1138 aa11.04□□□□□ -0.64
SUMO1P3-201ENST00000439961 COLQQ9Y215 455 aaPredicted RBP11.04□□□□□ -0.64
SUMO1P3-201ENST00000439961 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
SUMO1P3-201ENST00000439961 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
SUMO1P3-201ENST00000439961 TMEM121BQ9BXQ6 578 aaPredicted RBP11□□□□□ -0.65
SUMO1P3-201ENST00000439961 TRPC6Q9Y210 931 aa10.99□□□□□ -0.65
SUMO1P3-201ENST00000439961 IER5LQ5T953 404 aa10.95□□□□□ -0.66
SUMO1P3-201ENST00000439961 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
SUMO1P3-201ENST00000439961 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
SUMO1P3-201ENST00000439961 MAP3K13O43283 966 aa10.9□□□□□ -0.66
SUMO1P3-201ENST00000439961 TRIM35Q9UPQ4 493 aa10.88□□□□□ -0.67
SUMO1P3-201ENST00000439961 SNPHO15079 494 aa10.87□□□□□ -0.67
SUMO1P3-201ENST00000439961 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
SUMO1P3-201ENST00000439961 PLCG2P16885 1265 aa10.81□□□□□ -0.68
SUMO1P3-201ENST00000439961 EMP3P54852 163 aa10.75□□□□□ -0.69
SUMO1P3-201ENST00000439961 SGIP1Q9BQI5 828 aa10.73□□□□□ -0.69
SUMO1P3-201ENST00000439961 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
SUMO1P3-201ENST00000439961 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
SUMO1P3-201ENST00000439961 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.72□□□□□ -0.69
SUMO1P3-201ENST00000439961 PCDHB13Q9Y5F0 798 aa10.71□□□□□ -0.69
SUMO1P3-201ENST00000439961 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
SUMO1P3-201ENST00000439961 PLEKHG5O94827 1062 aa10.67□□□□□ -0.7
SUMO1P3-201ENST00000439961 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
SUMO1P3-201ENST00000439961 HS3ST6Q96QI5 342 aa10.67□□□□□ -0.7
SUMO1P3-201ENST00000439961 TMEM106CQ9BVX2 250 aa10.66□□□□□ -0.7
SUMO1P3-201ENST00000439961 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
SUMO1P3-201ENST00000439961 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
SUMO1P3-201ENST00000439961 POTEB3A0JP26 581 aa10.59□□□□□ -0.71
SUMO1P3-201ENST00000439961 POTEBQ6S5H4 581 aa10.59□□□□□ -0.71
SUMO1P3-201ENST00000439961 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
SUMO1P3-201ENST00000439961 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
SUMO1P3-201ENST00000439961 C3orf67Q6ZVT6 689 aa10.55□□□□□ -0.72
SUMO1P3-201ENST00000439961 MIER1Q8N108 512 aa10.51□□□□□ -0.73
SUMO1P3-201ENST00000439961 PROM2Q8N271 834 aa10.44□□□□□ -0.74
SUMO1P3-201ENST00000439961 MYT1LQ9UL68 1186 aa10.44□□□□□ -0.74
SUMO1P3-201ENST00000439961 L3MBTL3Q96JM7 780 aaPredicted RBP10.41□□□□□ -0.74
SUMO1P3-201ENST00000439961 FAM212AQ96EL1 285 aa10.39□□□□□ -0.75
SUMO1P3-201ENST00000439961 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
SUMO1P3-201ENST00000439961 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
SUMO1P3-201ENST00000439961 NUBP1P53384 320 aa10.35□□□□□ -0.75
SUMO1P3-201ENST00000439961 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
SUMO1P3-201ENST00000439961 ERBB3P21860 1342 aa10.34□□□□□ -0.75
SUMO1P3-201ENST00000439961 PTGER2P43116 358 aa10.31□□□□□ -0.76
SUMO1P3-201ENST00000439961 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
SUMO1P3-201ENST00000439961 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
SUMO1P3-201ENST00000439961 GOLGA2Q08379 1002 aa10.3□□□□□ -0.76
SUMO1P3-201ENST00000439961 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
SUMO1P3-201ENST00000439961 HOXB3P14651 431 aaPredicted RBP10.26□□□□□ -0.77
SUMO1P3-201ENST00000439961 CSRNP3Q8WYN3 585 aa10.25□□□□□ -0.77
SUMO1P3-201ENST00000439961 VARS2Q5ST30 1063 aaKnown RBP10.24□□□□□ -0.77
SUMO1P3-201ENST00000439961 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
SUMO1P3-201ENST00000439961 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
SUMO1P3-201ENST00000439961 PYGBP11216 843 aa10.22□□□□□ -0.77
SUMO1P3-201ENST00000439961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.22□□□□□ -0.77
SUMO1P3-201ENST00000439961 G3V3G9 751 aa10.19□□□□□ -0.78
SUMO1P3-201ENST00000439961 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
SUMO1P3-201ENST00000439961 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
SUMO1P3-201ENST00000439961 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
SUMO1P3-201ENST00000439961 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
SUMO1P3-201ENST00000439961 ANKRD13DQ6ZTN6 518 aa10.1□□□□□ -0.79
SUMO1P3-201ENST00000439961 ZNF467Q7Z7K2 595 aaPredicted RBP10.1□□□□□ -0.79
SUMO1P3-201ENST00000439961 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
SUMO1P3-201ENST00000439961 ILDR1Q86SU0 546 aaPredicted RBP10.06□□□□□ -0.8
SUMO1P3-201ENST00000439961 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
SUMO1P3-201ENST00000439961 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
SUMO1P3-201ENST00000439961 PSEN1P49768 467 aa10□□□□□ -0.81
SUMO1P3-201ENST00000439961 HCSTQ9UBK5 93 aa10□□□□□ -0.81
SUMO1P3-201ENST00000439961 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.81
SUMO1P3-201ENST00000439961 GPR153Q6NV75 609 aa9.94□□□□□ -0.82
SUMO1P3-201ENST00000439961 GSE1Q14687 1217 aa9.89□□□□□ -0.83
SUMO1P3-201ENST00000439961 CABP2Q9NPB3 220 aa9.89□□□□□ -0.83
SUMO1P3-201ENST00000439961 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
SUMO1P3-201ENST00000439961 IRX2Q9BZI1 471 aaPredicted RBP9.88□□□□□ -0.83
SUMO1P3-201ENST00000439961 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
SUMO1P3-201ENST00000439961 CHRM1P11229 460 aaPredicted RBP9.85□□□□□ -0.83
SUMO1P3-201ENST00000439961 PBX2P40425 430 aa9.85□□□□□ -0.83
SUMO1P3-201ENST00000439961 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
SUMO1P3-201ENST00000439961 RGS20O76081 388 aa9.82□□□□□ -0.84
SUMO1P3-201ENST00000439961 TMEM92Q6UXU6 159 aa9.79□□□□□ -0.84
SUMO1P3-201ENST00000439961 MICALL2Q8IY33 904 aa9.76□□□□□ -0.85
SUMO1P3-201ENST00000439961 KHSRPQ92945 711 aaKnown RBP eCLIP9.74□□□□□ -0.85
SUMO1P3-201ENST00000439961 ADGRD1Q6QNK2 874 aa9.72□□□□□ -0.85
SUMO1P3-201ENST00000439961 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms