RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.54
LRCH3-206ENST00000438796 ACIN1Q9UKV3 1341 aaKnown RBP18.39■□□□□ 0.53
LRCH3-206ENST00000438796 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
LRCH3-206ENST00000438796 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-206ENST00000438796 NPHP1O15259 732 aa18.32■□□□□ 0.52
LRCH3-206ENST00000438796 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
LRCH3-206ENST00000438796 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
LRCH3-206ENST00000438796 MRS2Q9HD23 443 aa18.29■□□□□ 0.52
LRCH3-206ENST00000438796 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
LRCH3-206ENST00000438796 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
LRCH3-206ENST00000438796 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
LRCH3-206ENST00000438796 SCRIBQ14160 1630 aa18.27■□□□□ 0.51
LRCH3-206ENST00000438796 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
LRCH3-206ENST00000438796 NCLP19338 710 aaKnown RBP18.25■□□□□ 0.51
LRCH3-206ENST00000438796 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
LRCH3-206ENST00000438796 RRP7BPQ9NSQ0 103 aa18.22■□□□□ 0.51
LRCH3-206ENST00000438796 GLIPR1L2Q4G1C9 344 aa18.17■□□□□ 0.5
LRCH3-206ENST00000438796 NEUROD2Q15784 382 aa18.14■□□□□ 0.5
LRCH3-206ENST00000438796 ZRSR1Q15695 479 aaKnown RBP18.14■□□□□ 0.49
LRCH3-206ENST00000438796 MTUS2Q5JR59 1369 aa18.14■□□□□ 0.49
LRCH3-206ENST00000438796 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
LRCH3-206ENST00000438796 NAP1L2Q9ULW6 460 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-206ENST00000438796 TRIM44Q96DX7 344 aaPredicted RBP18.1■□□□□ 0.49
LRCH3-206ENST00000438796 PTMAP06454 111 aaKnown RBP18.09■□□□□ 0.49
LRCH3-206ENST00000438796 CLSTN1O94985 981 aa18.08■□□□□ 0.49
LRCH3-206ENST00000438796 FTSJ3Q8IY81 847 aaKnown RBP18.07■□□□□ 0.48
LRCH3-206ENST00000438796 SOX12O15370 315 aa18.07■□□□□ 0.48
LRCH3-206ENST00000438796 BECN1Q14457 450 aa18.05■□□□□ 0.48
LRCH3-206ENST00000438796 DNTTIP2Q5QJE6 756 aaKnown RBP18.05■□□□□ 0.48
LRCH3-206ENST00000438796 PLCB2Q00722 1185 aa18.05■□□□□ 0.48
LRCH3-206ENST00000438796 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
LRCH3-206ENST00000438796 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
LRCH3-206ENST00000438796 OS9Q13438 667 aaPredicted RBP18.03■□□□□ 0.48
LRCH3-206ENST00000438796 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
LRCH3-206ENST00000438796 CFAP53Q96M91 514 aa18.02■□□□□ 0.47
LRCH3-206ENST00000438796 ISY1Q9ULR0 285 aaKnown RBP18.01■□□□□ 0.47
LRCH3-206ENST00000438796 GOLGA6L22H0YM25 854 aa18.01■□□□□ 0.47
LRCH3-206ENST00000438796 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
LRCH3-206ENST00000438796 POGKQ9P215 609 aa18■□□□□ 0.47
LRCH3-206ENST00000438796 MLECQ14165 292 aa17.98■□□□□ 0.47
LRCH3-206ENST00000438796 FGD1P98174 961 aa17.98■□□□□ 0.47
LRCH3-206ENST00000438796 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
LRCH3-206ENST00000438796 MIER1Q8N108 512 aa17.97■□□□□ 0.47
LRCH3-206ENST00000438796 FRAT1Q92837 279 aaPredicted RBP17.96■□□□□ 0.47
LRCH3-206ENST00000438796 MAPK8IP3Q9UPT6 1336 aa17.95■□□□□ 0.46
LRCH3-206ENST00000438796 DDRGK1Q96HY6 314 aa17.95■□□□□ 0.46
LRCH3-206ENST00000438796 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
LRCH3-206ENST00000438796 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
LRCH3-206ENST00000438796 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
LRCH3-206ENST00000438796 KCNJ4P48050 445 aa17.93■□□□□ 0.46
LRCH3-206ENST00000438796 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
LRCH3-206ENST00000438796 RGS3P49796 1198 aa17.9■□□□□ 0.46
LRCH3-206ENST00000438796 CARD11Q9BXL7 1154 aa17.88■□□□□ 0.45
LRCH3-206ENST00000438796 SAFB2Q14151 953 aaKnown RBP eCLIP17.87■□□□□ 0.45
LRCH3-206ENST00000438796 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
LRCH3-206ENST00000438796 RTN4Q9NQC3 1192 aaKnown RBP17.84■□□□□ 0.45
LRCH3-206ENST00000438796 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
LRCH3-206ENST00000438796 ZNF330Q9Y3S2 320 aaPredicted RBP17.83■□□□□ 0.45
LRCH3-206ENST00000438796 SPRYD3Q8NCJ5 442 aa17.82■□□□□ 0.44
LRCH3-206ENST00000438796 CFDP1Q9UEE9 299 aaPredicted RBP17.82■□□□□ 0.44
LRCH3-206ENST00000438796 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
LRCH3-206ENST00000438796 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
LRCH3-206ENST00000438796 NAP1L5Q96NT1 182 aaPredicted RBP17.8■□□□□ 0.44
LRCH3-206ENST00000438796 CDCA8Q53HL2 280 aa17.79■□□□□ 0.44
LRCH3-206ENST00000438796 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.44
LRCH3-206ENST00000438796 APBB1O00213 710 aa17.77■□□□□ 0.44
LRCH3-206ENST00000438796 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
LRCH3-206ENST00000438796 GOLGA6L6A8MZA4 724 aa17.75■□□□□ 0.43
LRCH3-206ENST00000438796 STK26Q9P289 416 aa17.75■□□□□ 0.43
LRCH3-206ENST00000438796 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.75■□□□□ 0.43
LRCH3-206ENST00000438796 CCDC9Q9Y3X0 531 aaKnown RBP17.74■□□□□ 0.43
LRCH3-206ENST00000438796 PRM3Q9NNZ6 103 aa17.74■□□□□ 0.43
LRCH3-206ENST00000438796 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
LRCH3-206ENST00000438796 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
LRCH3-206ENST00000438796 CLIP1P30622 1438 aa17.73■□□□□ 0.43
LRCH3-206ENST00000438796 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
LRCH3-206ENST00000438796 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
LRCH3-206ENST00000438796 PDE4CQ08493 712 aa17.71■□□□□ 0.43
LRCH3-206ENST00000438796 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
LRCH3-206ENST00000438796 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
LRCH3-206ENST00000438796 ANO8Q9HCE9 1232 aaPredicted RBP17.71■□□□□ 0.43
LRCH3-206ENST00000438796 DRC7Q8IY82 874 aa17.7■□□□□ 0.42
LRCH3-206ENST00000438796 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
LRCH3-206ENST00000438796 RTF1Q92541 710 aaKnown RBP17.66■□□□□ 0.42
LRCH3-206ENST00000438796 SIN3AQ96ST3 1273 aa17.66■□□□□ 0.42
LRCH3-206ENST00000438796 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
LRCH3-206ENST00000438796 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
LRCH3-206ENST00000438796 PNNQ9H307 717 aaKnown RBP17.62■□□□□ 0.41
LRCH3-206ENST00000438796 CHMP3Q9Y3E7 222 aa17.62■□□□□ 0.41
LRCH3-206ENST00000438796 B4GALNT3Q6L9W6 998 aa17.61■□□□□ 0.41
LRCH3-206ENST00000438796 GGT6Q6P531 493 aa17.6■□□□□ 0.41
LRCH3-206ENST00000438796 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
LRCH3-206ENST00000438796 MORC1Q86VD1 984 aa17.6■□□□□ 0.41
LRCH3-206ENST00000438796 TMX4Q9H1E5 349 aaPredicted RBP17.6■□□□□ 0.41
LRCH3-206ENST00000438796 NRDCO43847 1150 aa17.59■□□□□ 0.41
LRCH3-206ENST00000438796 G3V3G9 751 aa17.58■□□□□ 0.4
LRCH3-206ENST00000438796 MCCP23508 829 aa17.58■□□□□ 0.4
LRCH3-206ENST00000438796 DCAF8Q5TAQ9 597 aa17.58■□□□□ 0.4
LRCH3-206ENST00000438796 ARID3AQ99856 593 aa17.57■□□□□ 0.4
LRCH3-206ENST00000438796 DCAF1Q9Y4B6 1507 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms